EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006158 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1155 bases
Position: chrreftig_20:583668-584822
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010463	eRF1_2	PF03464.15	2.4e-34	1	1
ENSCSAVP00000010463	eRF1_3	PF03465.15	1.1e-23	1	1
ENSCSAVP00000010463	eRF1_1	PF03463.15	1.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010589	-	1155	-	ENSCSAVP00000010463	384 (aa)	-	H2YYQ2

Gene Model

Click here to download ENSCSAVG00000006158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006158's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006158	-	100	69.610	ENSG00000152684	PELO	100	69.610	Homo_sapiens
ENSCSAVG00000006158	-	64	68.826	ENSAPOG00000023700	-	90	68.826	Acanthochromis_polyacanthus
ENSCSAVG00000006158	-	100	65.365	ENSAPOG00000023072	pelo	99	65.365	Acanthochromis_polyacanthus
ENSCSAVG00000006158	-	64	68.826	ENSAPOG00000000616	pelo	90	68.826	Acanthochromis_polyacanthus
ENSCSAVG00000006158	-	100	70.390	ENSAMEG00000007734	PELO	100	70.390	Ailuropoda_melanoleuca
ENSCSAVG00000006158	-	97	62.198	ENSACIG00000014386	pelo	97	66.667	Amphilophus_citrinellus
ENSCSAVG00000006158	-	100	65.625	ENSAOCG00000023717	pelo	99	65.625	Amphiprion_ocellaris
ENSCSAVG00000006158	-	100	65.625	ENSAPEG00000011235	pelo	99	65.625	Amphiprion_percula
ENSCSAVG00000006158	-	100	66.753	ENSATEG00000019550	pelo	100	66.753	Anabas_testudineus
ENSCSAVG00000006158	-	77	62.081	ENSAPLG00000013265	PELO	100	62.081	Anas_platyrhynchos
ENSCSAVG00000006158	-	98	69.067	ENSACAG00000004352	PELO	100	68.831	Anolis_carolinensis
ENSCSAVG00000006158	-	100	69.610	ENSANAG00000014096	PELO	100	69.610	Aotus_nancymaae
ENSCSAVG00000006158	-	100	66.753	ENSACLG00000010305	pelo	100	66.753	Astatotilapia_calliptera
ENSCSAVG00000006158	-	97	65.684	ENSAMXG00000020299	pelo	100	65.285	Astyanax_mexicanus
ENSCSAVG00000006158	-	100	70.390	ENSBTAG00000003268	PELO	99	70.390	Bos_taurus
ENSCSAVG00000006158	-	98	55.467	WBGene00011280	pelo-1	98	55.467	Caenorhabditis_elegans
ENSCSAVG00000006158	-	100	69.610	ENSCJAG00000035190	PELO	100	69.610	Callithrix_jacchus
ENSCSAVG00000006158	-	100	70.390	ENSCAFG00020023234	PELO	100	70.390	Canis_lupus_dingo
ENSCSAVG00000006158	-	100	70.649	ENSCHIG00000016410	PELO	99	70.649	Capra_hircus
ENSCSAVG00000006158	-	100	69.351	ENSTSYG00000005203	PELO	100	69.351	Carlito_syrichta
ENSCSAVG00000006158	-	100	70.390	ENSCPOG00000027406	PELO	100	70.390	Cavia_porcellus
ENSCSAVG00000006158	-	100	69.610	ENSCCAG00000035600	PELO	100	69.610	Cebus_capucinus
ENSCSAVG00000006158	-	100	69.351	ENSCATG00000011829	PELO	100	69.351	Cercocebus_atys
ENSCSAVG00000006158	-	100	69.870	ENSCLAG00000005043	PELO	100	69.870	Chinchilla_lanigera
ENSCSAVG00000006158	-	100	69.351	ENSCSAG00000016692	PELO	100	69.351	Chlorocebus_sabaeus
ENSCSAVG00000006158	-	100	69.610	ENSCHOG00000000523	PELO	100	69.610	Choloepus_hoffmanni
ENSCSAVG00000006158	-	98	69.333	ENSCPBG00000007544	PELO	100	69.091	Chrysemys_picta_bellii
ENSCSAVG00000006158	-	97	90.617	ENSCING00000001979	-	100	90.365	Ciona_intestinalis
ENSCSAVG00000006158	-	100	69.351	ENSCANG00000023382	PELO	100	69.351	Colobus_angolensis_palliatus
ENSCSAVG00000006158	-	97	69.705	ENSCGRG00001024665	Pelo	100	69.351	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006158	-	97	70.509	ENSCGRG00000004570	Pelo	100	70.130	Cricetulus_griseus_crigri
ENSCSAVG00000006158	-	100	64.935	ENSCSEG00000008807	pelo	100	64.935	Cynoglossus_semilaevis
ENSCSAVG00000006158	-	100	66.753	ENSCVAG00000016082	pelo	100	66.753	Cyprinodon_variegatus
ENSCSAVG00000006158	-	100	66.753	ENSDARG00000055477	pelo	100	66.753	Danio_rerio
ENSCSAVG00000006158	-	96	69.189	ENSDNOG00000036721	PELO	96	69.189	Dasypus_novemcinctus
ENSCSAVG00000006158	-	100	70.649	ENSDORG00000016689	Pelo	100	70.649	Dipodomys_ordii
ENSCSAVG00000006158	-	97	64.151	FBgn0011207	pelo	97	63.185	Drosophila_melanogaster
ENSCSAVG00000006158	-	72	73.099	ENSEBUG00000004955	pelo	99	73.099	Eptatretus_burgeri
ENSCSAVG00000006158	-	100	69.610	ENSEASG00005013348	PELO	100	69.610	Equus_asinus_asinus
ENSCSAVG00000006158	-	100	66.146	ENSELUG00000023229	pelo	98	67.887	Esox_lucius
ENSCSAVG00000006158	-	100	70.130	ENSFCAG00000032341	PELO	100	70.130	Felis_catus
ENSCSAVG00000006158	-	100	69.610	ENSFALG00000004559	PELO	100	69.610	Ficedula_albicollis
ENSCSAVG00000006158	-	74	71.378	ENSFDAG00000002076	PELO	88	71.378	Fukomys_damarensis
ENSCSAVG00000006158	-	100	65.974	ENSFHEG00000009769	pelo	100	66.213	Fundulus_heteroclitus
ENSCSAVG00000006158	-	98	66.578	ENSGMOG00000005849	pelo	99	65.885	Gadus_morhua
ENSCSAVG00000006158	-	99	66.316	ENSGAFG00000019350	pelo	99	66.316	Gambusia_affinis
ENSCSAVG00000006158	-	100	66.494	ENSGACG00000007245	pelo	97	70.879	Gasterosteus_aculeatus
ENSCSAVG00000006158	-	98	69.600	ENSGAGG00000004018	PELO	100	69.351	Gopherus_agassizii
ENSCSAVG00000006158	-	100	69.351	ENSGGOG00000012635	PELO	100	69.351	Gorilla_gorilla
ENSCSAVG00000006158	-	100	66.753	ENSHBUG00000005866	pelo	100	66.753	Haplochromis_burtoni
ENSCSAVG00000006158	-	100	70.649	ENSHGLG00000005932	PELO	100	70.649	Heterocephalus_glaber_female
ENSCSAVG00000006158	-	100	69.870	ENSHGLG00100017627	PELO	100	69.870	Heterocephalus_glaber_male
ENSCSAVG00000006158	-	100	65.104	ENSHCOG00000016782	pelo	99	65.104	Hippocampus_comes
ENSCSAVG00000006158	-	100	66.753	ENSIPUG00000020627	pelo	100	66.753	Ictalurus_punctatus
ENSCSAVG00000006158	-	100	69.870	ENSSTOG00000027378	PELO	100	69.870	Ictidomys_tridecemlineatus
ENSCSAVG00000006158	-	100	69.610	ENSJJAG00000015032	Pelo	100	69.610	Jaculus_jaculus
ENSCSAVG00000006158	-	100	66.494	ENSKMAG00000021305	pelo	100	66.494	Kryptolebias_marmoratus
ENSCSAVG00000006158	-	100	65.885	ENSLBEG00000022399	pelo	100	65.885	Labrus_bergylta
ENSCSAVG00000006158	-	100	69.091	ENSLAFG00000020551	PELO	100	69.091	Loxodonta_africana
ENSCSAVG00000006158	-	100	69.351	ENSMFAG00000000651	PELO	100	69.351	Macaca_fascicularis
ENSCSAVG00000006158	-	100	69.351	ENSMMUG00000039101	PELO	100	69.351	Macaca_mulatta
ENSCSAVG00000006158	-	100	69.351	ENSMNEG00000035538	PELO	100	69.351	Macaca_nemestrina
ENSCSAVG00000006158	-	100	69.351	ENSMLEG00000039113	PELO	100	69.351	Mandrillus_leucophaeus
ENSCSAVG00000006158	-	97	67.292	ENSMAMG00000013260	pelo	100	67.013	Mastacembelus_armatus
ENSCSAVG00000006158	-	100	66.753	ENSMZEG00005014258	pelo	100	66.753	Maylandia_zebra
ENSCSAVG00000006158	-	100	70.130	ENSMAUG00000009770	Pelo	100	70.130	Mesocricetus_auratus
ENSCSAVG00000006158	-	100	69.351	ENSMICG00000044040	PELO	100	69.351	Microcebus_murinus
ENSCSAVG00000006158	-	100	71.169	ENSMOCG00000017554	Pelo	100	71.169	Microtus_ochrogaster
ENSCSAVG00000006158	-	100	64.844	ENSMMOG00000001324	pelo	99	64.844	Mola_mola
ENSCSAVG00000006158	-	99	66.494	ENSMALG00000008194	pelo	100	66.494	Monopterus_albus
ENSCSAVG00000006158	-	100	70.390	MGP_CAROLIEiJ_G0018915	Pelo	100	70.390	Mus_caroli
ENSCSAVG00000006158	-	100	70.390	ENSMUSG00000042275	Pelo	100	70.390	Mus_musculus
ENSCSAVG00000006158	-	100	70.649	MGP_PahariEiJ_G0015985	Pelo	100	70.649	Mus_pahari
ENSCSAVG00000006158	-	100	70.390	MGP_SPRETEiJ_G0019793	Pelo	100	70.390	Mus_spretus
ENSCSAVG00000006158	-	100	69.271	ENSMLUG00000024132	PELO	100	69.271	Myotis_lucifugus
ENSCSAVG00000006158	-	100	70.390	ENSNGAG00000019331	Pelo	100	70.390	Nannospalax_galili
ENSCSAVG00000006158	-	100	66.234	ENSNBRG00000011799	pelo	100	66.234	Neolamprologus_brichardi
ENSCSAVG00000006158	-	100	69.351	ENSNLEG00000035970	PELO	100	69.351	Nomascus_leucogenys
ENSCSAVG00000006158	-	100	67.792	ENSMEUG00000005468	PELO	100	67.792	Notamacropus_eugenii
ENSCSAVG00000006158	-	98	69.048	ENSOPRG00000018793	PELO	99	69.048	Ochotona_princeps
ENSCSAVG00000006158	-	100	70.390	ENSODEG00000017579	PELO	100	70.390	Octodon_degus
ENSCSAVG00000006158	-	96	67.027	ENSONIG00000011511	pelo	100	66.234	Oreochromis_niloticus
ENSCSAVG00000006158	-	100	69.870	ENSOCUG00000023902	PELO	100	69.870	Oryctolagus_cuniculus
ENSCSAVG00000006158	-	100	64.935	ENSORLG00000005827	pelo	100	64.935	Oryzias_latipes
ENSCSAVG00000006158	-	100	65.195	ENSORLG00020016456	pelo	100	65.195	Oryzias_latipes_hni
ENSCSAVG00000006158	-	100	65.195	ENSORLG00015014447	pelo	100	65.278	Oryzias_latipes_hsok
ENSCSAVG00000006158	-	100	65.974	ENSOMEG00000021567	pelo	100	65.974	Oryzias_melastigma
ENSCSAVG00000006158	-	100	69.351	ENSOGAG00000027940	PELO	100	69.351	Otolemur_garnettii
ENSCSAVG00000006158	-	100	70.390	ENSOARG00000008324	PELO	99	70.390	Ovis_aries
ENSCSAVG00000006158	-	100	69.351	ENSPPAG00000038951	PELO	100	69.351	Pan_paniscus
ENSCSAVG00000006158	-	100	70.130	ENSPPRG00000018800	PELO	100	70.130	Panthera_pardus
ENSCSAVG00000006158	-	100	70.130	ENSPTIG00000019988	PELO	100	70.130	Panthera_tigris_altaica
ENSCSAVG00000006158	-	100	69.610	ENSPTRG00000034409	PELO	100	69.610	Pan_troglodytes
ENSCSAVG00000006158	-	100	69.351	ENSPANG00000010902	PELO	100	69.351	Papio_anubis
ENSCSAVG00000006158	-	99	68.312	ENSPKIG00000015190	pelo	100	68.312	Paramormyrops_kingsleyae
ENSCSAVG00000006158	-	98	69.600	ENSPSIG00000004971	PELO	100	69.351	Pelodiscus_sinensis
ENSCSAVG00000006158	-	66	66.535	ENSPMGG00000014561	pelo	94	66.535	Periophthalmus_magnuspinnatus
ENSCSAVG00000006158	-	100	70.130	ENSPEMG00000015584	Pelo	100	70.130	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006158	-	99	69.191	ENSPCIG00000004880	PELO	99	69.191	Phascolarctos_cinereus
ENSCSAVG00000006158	-	100	67.013	ENSPFOG00000007277	pelo	100	67.013	Poecilia_formosa
ENSCSAVG00000006158	-	100	67.013	ENSPLAG00000020787	pelo	100	67.013	Poecilia_latipinna
ENSCSAVG00000006158	-	100	67.013	ENSPMEG00000016964	pelo	100	67.013	Poecilia_mexicana
ENSCSAVG00000006158	-	100	67.013	ENSPREG00000023071	pelo	100	67.013	Poecilia_reticulata
ENSCSAVG00000006158	-	97	69.169	ENSPPYG00000015451	PELO	96	69.091	Pongo_abelii
ENSCSAVG00000006158	-	100	69.351	ENSPCOG00000021178	PELO	100	69.351	Propithecus_coquereli
ENSCSAVG00000006158	-	100	66.753	ENSPNYG00000017325	pelo	100	66.753	Pundamilia_nyererei
ENSCSAVG00000006158	-	97	67.292	ENSPNAG00000012458	pelo	100	66.580	Pygocentrus_nattereri
ENSCSAVG00000006158	-	100	70.130	ENSRNOG00000061128	Pelo	100	70.130	Rattus_norvegicus
ENSCSAVG00000006158	-	100	69.351	ENSRBIG00000007299	PELO	100	69.351	Rhinopithecus_bieti
ENSCSAVG00000006158	-	100	69.351	ENSRROG00000035507	PELO	100	69.351	Rhinopithecus_roxellana
ENSCSAVG00000006158	-	94	34.865	YNL001W	-	95	34.865	Saccharomyces_cerevisiae
ENSCSAVG00000006158	-	100	69.351	ENSSBOG00000036140	PELO	100	69.351	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006158	-	63	65.984	ENSSHAG00000010770	PELO	100	65.984	Sarcophilus_harrisii
ENSCSAVG00000006158	-	98	68.170	ENSSFOG00015013399	pelo	99	67.448	Scleropages_formosus
ENSCSAVG00000006158	-	100	64.675	ENSSMAG00000017171	pelo	100	64.675	Scophthalmus_maximus
ENSCSAVG00000006158	-	100	65.714	ENSSDUG00000022938	pelo	100	65.714	Seriola_dumerili
ENSCSAVG00000006158	-	100	62.597	ENSSLDG00000017884	pelo	100	62.597	Seriola_lalandi_dorsalis
ENSCSAVG00000006158	-	98	67.467	ENSSPUG00000005545	PELO	100	67.273	Sphenodon_punctatus
ENSCSAVG00000006158	-	98	66.578	ENSSPAG00000008501	pelo	99	65.885	Stegastes_partitus
ENSCSAVG00000006158	-	100	68.571	ENSSSCG00000016884	PELO	100	68.571	Sus_scrofa
ENSCSAVG00000006158	-	100	69.351	ENSTGUG00000002416	PELO	100	69.351	Taeniopygia_guttata
ENSCSAVG00000006158	-	100	65.714	ENSTRUG00000005809	pelo	100	65.714	Takifugu_rubripes
ENSCSAVG00000006158	-	100	65.974	ENSTNIG00000018937	pelo	100	65.974	Tetraodon_nigroviridis
ENSCSAVG00000006158	-	100	69.610	ENSTTRG00000001857	PELO	100	69.610	Tursiops_truncatus
ENSCSAVG00000006158	-	100	70.390	ENSUAMG00000002535	PELO	100	70.390	Ursus_americanus
ENSCSAVG00000006158	-	100	70.390	ENSUMAG00000005809	PELO	100	70.390	Ursus_maritimus
ENSCSAVG00000006158	-	100	70.130	ENSVPAG00000001113	PELO	100	70.130	Vicugna_pacos
ENSCSAVG00000006158	-	100	70.390	ENSVVUG00000025499	PELO	100	70.390	Vulpes_vulpes
ENSCSAVG00000006158	-	80	67.320	ENSXETG00000018368	pelo	99	66.458	Xenopus_tropicalis
ENSCSAVG00000006158	-	100	66.234	ENSXMAG00000018474	pelo	100	66.234	Xiphophorus_maculatus