EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000006176 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
5454 bases
Position
chrreftig_20:624909-630362
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000010487eIF3_NPF09440.104.8e-4511
ENSCSAVP00000010485eIF3_NPF09440.102.8e-4311
ENSCSAVP00000010486eIF3_NPF09440.103e-3411
ENSCSAVP00000010484eIF3_NPF09440.107.6e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000010611-1557-ENSCSAVP00000010484308 (aa)-H2YYS3
ENSCSAVT00000010612-1502-ENSCSAVP00000010485430 (aa)-H2YYS4
ENSCSAVT00000010613-1545-ENSCSAVP00000010486449 (aa)-H2YYS5
ENSCSAVT00000010614-1455-ENSCSAVP00000010487424 (aa)-H2YYS6
Gene Model
Click here to download ENSCSAVG00000006176's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006176's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000006176-10072.664ENSG00000104408EIF3E10079.592Homo_sapiens
ENSCSAVG00000006176-9972.365ENSAPOG00000015896eif3ea9569.087Acanthochromis_polyacanthus
ENSCSAVG00000006176-10072.664ENSAMEG00000012790EIF3E9672.664Ailuropoda_melanoleuca
ENSCSAVG00000006176-10073.598ENSACIG00000019712eif3eb9673.598Amphilophus_citrinellus
ENSCSAVG00000006176-9972.131ENSACIG00000001940eif3ea9672.131Amphilophus_citrinellus
ENSCSAVG00000006176-10073.131ENSAOCG00000007680eif3eb9673.131Amphiprion_ocellaris
ENSCSAVG00000006176-9972.365ENSAOCG00000011820eif3ea9672.365Amphiprion_ocellaris
ENSCSAVG00000006176-9972.365ENSAPEG00000019839eif3ea9672.365Amphiprion_percula
ENSCSAVG00000006176-10073.131ENSAPEG00000017710eif3eb9673.131Amphiprion_percula
ENSCSAVG00000006176-10073.598ENSATEG00000004268eif3eb9673.598Anabas_testudineus
ENSCSAVG00000006176-9972.600ENSATEG00000024601eif3ea9672.600Anabas_testudineus
ENSCSAVG00000006176-10070.465ENSAPLG00000006091EIF3E9670.465Anas_platyrhynchos
ENSCSAVG00000006176-10071.028ENSACAG00000010203EIF3E9671.028Anolis_carolinensis
ENSCSAVG00000006176-10068.692ENSANAG00000032651-9668.692Aotus_nancymaae
ENSCSAVG00000006176-10072.664ENSANAG00000022942EIF3E9872.475Aotus_nancymaae
ENSCSAVG00000006176-10073.364ENSACLG00000000562eif3eb9673.364Astatotilapia_calliptera
ENSCSAVG00000006176-9972.365ENSACLG00000023831eif3ea9672.365Astatotilapia_calliptera
ENSCSAVG00000006176-10072.897ENSAMXG00000010999EIF3E9772.897Astyanax_mexicanus
ENSCSAVG00000006176-10072.897ENSAMXG00000040417eif3ea9672.897Astyanax_mexicanus
ENSCSAVG00000006176-10072.664ENSBTAG00000006702EIF3E9672.664Bos_taurus
ENSCSAVG00000006176-9949.065WBGene00001228eif-3.E9849.065Caenorhabditis_elegans
ENSCSAVG00000006176-10072.664ENSCJAG00000006458EIF3E9272.664Callithrix_jacchus
ENSCSAVG00000006176-10072.664ENSCAFG00000000702EIF3E9672.664Canis_familiaris
ENSCSAVG00000006176-10072.664ENSCAFG00020003350EIF3E9672.664Canis_lupus_dingo
ENSCSAVG00000006176-10072.664ENSCHIG00000004339EIF3E9672.664Capra_hircus
ENSCSAVG00000006176-10060.093ENSTSYG00000036102-9360.093Carlito_syrichta
ENSCSAVG00000006176-10072.664ENSTSYG00000004203EIF3E9672.664Carlito_syrichta
ENSCSAVG00000006176-9264.211ENSCAPG00000011168EIF3E9564.122Cavia_aperea
ENSCSAVG00000006176-10054.824ENSCPOG00000036767-9754.824Cavia_porcellus
ENSCSAVG00000006176-10072.664ENSCPOG00000006266EIF3E9672.664Cavia_porcellus
ENSCSAVG00000006176-10072.664ENSCCAG00000026961EIF3E9671.729Cebus_capucinus
ENSCSAVG00000006176-10072.664ENSCATG00000031561EIF3E9575.821Cercocebus_atys
ENSCSAVG00000006176-10072.664ENSCLAG00000014021EIF3E9672.664Chinchilla_lanigera
ENSCSAVG00000006176-10072.664ENSCSAG00000011703EIF3E9672.664Chlorocebus_sabaeus
ENSCSAVG00000006176-9162.057ENSCHOG00000003426EIF3E9649.883Choloepus_hoffmanni
ENSCSAVG00000006176-8977.778ENSCPBG00000001145EIF3E9677.397Chrysemys_picta_bellii
ENSCSAVG00000006176-9996.209ENSCING00000001964-9596.209Ciona_intestinalis
ENSCSAVG00000006176-10072.664ENSCANG00000014155EIF3E9575.821Colobus_angolensis_palliatus
ENSCSAVG00000006176-10072.664ENSCGRG00001006785Eif3e9672.664Cricetulus_griseus_chok1gshd
ENSCSAVG00000006176-9274.737ENSCGRG00000011002Eif3e9473.116Cricetulus_griseus_crigri
ENSCSAVG00000006176-10072.430ENSCSEG00000009047eif3eb9772.600Cynoglossus_semilaevis
ENSCSAVG00000006176-9968.150ENSCSEG00000009253eif3ea9959.259Cynoglossus_semilaevis
ENSCSAVG00000006176-9973.068ENSCVAG00000012134eif3ea9873.399Cyprinodon_variegatus
ENSCSAVG00000006176-9967.681ENSCVAG00000016536eif3eb9467.681Cyprinodon_variegatus
ENSCSAVG00000006176-10072.897ENSDARG00000002549eif3eb9672.897Danio_rerio
ENSCSAVG00000006176-9972.131ENSDARG00000090697eif3ea9672.131Danio_rerio
ENSCSAVG00000006176-5868.783ENSDNOG00000047519-9468.586Dasypus_novemcinctus
ENSCSAVG00000006176-10071.262ENSDNOG00000011854EIF3E9270.439Dasypus_novemcinctus
ENSCSAVG00000006176-10072.664ENSDORG00000014106Eif3e9672.664Dipodomys_ordii
ENSCSAVG00000006176-9954.824FBgn0025582eIF3e9654.824Drosophila_melanogaster
ENSCSAVG00000006176-10061.449ENSETEG00000013105EIF3E9661.449Echinops_telfairi
ENSCSAVG00000006176-10071.262ENSEBUG00000008365eif3ea8771.262Eptatretus_burgeri
ENSCSAVG00000006176-10069.626ENSEASG00005000253EIF3E9169.626Equus_asinus_asinus
ENSCSAVG00000006176-10072.664ENSECAG00000000236EIF3E9672.664Equus_caballus
ENSCSAVG00000006176-9172.340ENSEEUG00000013881EIF3E10071.831Erinaceus_europaeus
ENSCSAVG00000006176-10072.430ENSELUG00000020626eif3ea9672.430Esox_lucius
ENSCSAVG00000006176-10072.664ENSFCAG00000003665EIF3E9672.664Felis_catus
ENSCSAVG00000006176-10072.897ENSFALG00000006092EIF3E9672.897Ficedula_albicollis
ENSCSAVG00000006176-10072.664ENSFDAG00000010800EIF3E9672.664Fukomys_damarensis
ENSCSAVG00000006176-9973.302ENSFHEG00000008926eif3ea9673.302Fundulus_heteroclitus
ENSCSAVG00000006176-10073.131ENSGALG00000037067EIF3E9673.131Gallus_gallus
ENSCSAVG00000006176-9973.536ENSGAFG00000001242eif3ea9673.536Gambusia_affinis
ENSCSAVG00000006176-9971.897ENSGACG00000005380eif3ea9675.926Gasterosteus_aculeatus
ENSCSAVG00000006176-10072.897ENSGAGG00000015331EIF3E9672.897Gopherus_agassizii
ENSCSAVG00000006176-10072.664ENSGGOG00000022955EIF3E9575.821Gorilla_gorilla
ENSCSAVG00000006176-9972.600ENSHBUG00000014820eif3ea9672.600Haplochromis_burtoni
ENSCSAVG00000006176-10073.364ENSHBUG00000018043eif3eb9673.364Haplochromis_burtoni
ENSCSAVG00000006176-8268.872ENSHGLG00000015040-9368.060Heterocephalus_glaber_female
ENSCSAVG00000006176-10072.664ENSHGLG00000008859EIF3E9672.664Heterocephalus_glaber_female
ENSCSAVG00000006176-9460.494ENSHGLG00000001219-9560.494Heterocephalus_glaber_female
ENSCSAVG00000006176-10056.000ENSHGLG00000013468-8756.000Heterocephalus_glaber_female
ENSCSAVG00000006176-9572.482ENSHGLG00100009135-9573.116Heterocephalus_glaber_male
ENSCSAVG00000006176-10056.000ENSHGLG00100002564-8756.000Heterocephalus_glaber_male
ENSCSAVG00000006176-9460.741ENSHGLG00100008078-9560.741Heterocephalus_glaber_male
ENSCSAVG00000006176-10065.654ENSHGLG00100006718-9665.654Heterocephalus_glaber_male
ENSCSAVG00000006176-10073.131ENSHCOG00000005454eif3eb9673.131Hippocampus_comes
ENSCSAVG00000006176-10072.430ENSIPUG00000019974eif3e9672.430Ictalurus_punctatus
ENSCSAVG00000006176-10073.131ENSIPUG00000002187eif3eb9673.131Ictalurus_punctatus
ENSCSAVG00000006176-10072.664ENSSTOG00000008976EIF3E9672.664Ictidomys_tridecemlineatus
ENSCSAVG00000006176-10072.897ENSJJAG00000005084Eif3e9672.897Jaculus_jaculus
ENSCSAVG00000006176-9266.838ENSJJAG00000017323-9066.838Jaculus_jaculus
ENSCSAVG00000006176-10060.280ENSJJAG00000018431-9659.353Jaculus_jaculus
ENSCSAVG00000006176-10073.131ENSKMAG00000008136eif3eb9673.131Kryptolebias_marmoratus
ENSCSAVG00000006176-9972.600ENSKMAG00000003405eif3ea9672.600Kryptolebias_marmoratus
ENSCSAVG00000006176-10072.897ENSLBEG00000020389EIF3E9172.897Labrus_bergylta
ENSCSAVG00000006176-9973.068ENSLBEG00000004039eif3ea9673.068Labrus_bergylta
ENSCSAVG00000006176-9272.378ENSLBEG00000020509-9571.469Labrus_bergylta
ENSCSAVG00000006176-10073.364ENSLACG00000003982EIF3E9673.364Latimeria_chalumnae
ENSCSAVG00000006176-10073.598ENSLOCG00000003110eif3eb9673.598Lepisosteus_oculatus
ENSCSAVG00000006176-10071.729ENSLAFG00000004294EIF3E9671.729Loxodonta_africana
ENSCSAVG00000006176-10072.664ENSMFAG00000035456EIF3E9671.262Macaca_fascicularis
ENSCSAVG00000006176-10072.664ENSMMUG00000011359EIF3E9872.664Macaca_mulatta
ENSCSAVG00000006176-10048.605ENSMMUG00000046713-9548.605Macaca_mulatta
ENSCSAVG00000006176-10072.664ENSMNEG00000045529EIF3E9671.262Macaca_nemestrina
ENSCSAVG00000006176-10072.664ENSMLEG00000028730EIF3E9575.821Mandrillus_leucophaeus
ENSCSAVG00000006176-10073.598ENSMAMG00000006629eif3eb9673.598Mastacembelus_armatus
ENSCSAVG00000006176-10073.364ENSMZEG00005026174eif3eb9673.364Maylandia_zebra
ENSCSAVG00000006176-9972.365ENSMZEG00005011391eif3ea9672.365Maylandia_zebra
ENSCSAVG00000006176-10073.131ENSMGAG00000012388EIF3E9673.131Meleagris_gallopavo
ENSCSAVG00000006176-10072.664ENSMAUG00000009946Eif3e9672.664Mesocricetus_auratus
ENSCSAVG00000006176-10071.963ENSMICG00000026328-9171.963Microcebus_murinus
ENSCSAVG00000006176-10072.430ENSMICG00000030407-9575.522Microcebus_murinus
ENSCSAVG00000006176-10072.664ENSMOCG00000014831Eif3e9672.664Microtus_ochrogaster
ENSCSAVG00000006176-10061.412ENSMMOG00000014382eif3eb9561.412Mola_mola
ENSCSAVG00000006176-9971.897ENSMMOG00000017701eif3ea9671.897Mola_mola
ENSCSAVG00000006176-10070.794ENSMODG00000005232EIF3E9670.794Monodelphis_domestica
ENSCSAVG00000006176-10073.131ENSMALG00000015638eif3eb9673.131Monopterus_albus
ENSCSAVG00000006176-10072.664MGP_CAROLIEiJ_G0019768Eif3e9672.664Mus_caroli
ENSCSAVG00000006176-10072.664ENSMUSG00000022336Eif3e9672.664Mus_musculus
ENSCSAVG00000006176-10072.664MGP_PahariEiJ_G0019777Eif3e9672.664Mus_pahari
ENSCSAVG00000006176-10072.664MGP_SPRETEiJ_G0020665Eif3e9982.143Mus_spretus
ENSCSAVG00000006176-10072.664ENSMPUG00000005924EIF3E9672.664Mustela_putorius_furo
ENSCSAVG00000006176-10072.430ENSMLUG00000007269EIF3E9672.430Myotis_lucifugus
ENSCSAVG00000006176-10066.121ENSNGAG00000000894-9665.358Nannospalax_galili
ENSCSAVG00000006176-10067.907ENSNBRG00000016569eif3eb9667.907Neolamprologus_brichardi
ENSCSAVG00000006176-9972.365ENSNBRG00000008482eif3ea9672.365Neolamprologus_brichardi
ENSCSAVG00000006176-10072.664ENSNLEG00000004120EIF3E9575.821Nomascus_leucogenys
ENSCSAVG00000006176-9759.036ENSNLEG00000029407-9559.036Nomascus_leucogenys
ENSCSAVG00000006176-6187.805ENSMEUG00000013985-5887.805Notamacropus_eugenii
ENSCSAVG00000006176-8777.551ENSOPRG00000012154EIF3E8777.551Ochotona_princeps
ENSCSAVG00000006176-10071.729ENSODEG00000001057-9671.729Octodon_degus
ENSCSAVG00000006176-9972.365ENSONIG00000000047eif3ea9672.365Oreochromis_niloticus
ENSCSAVG00000006176-10073.598ENSONIG00000013822eif3eb9673.598Oreochromis_niloticus
ENSCSAVG00000006176-9274.737ENSOANG00000002269EIF3E9672.917Ornithorhynchus_anatinus
ENSCSAVG00000006176-10072.664ENSOCUG00000008050EIF3E9371.824Oryctolagus_cuniculus
ENSCSAVG00000006176-9973.068ENSORLG00000020701eif3ea9673.068Oryzias_latipes
ENSCSAVG00000006176-9973.068ENSORLG00020001623eif3e9673.068Oryzias_latipes_hni
ENSCSAVG00000006176-9972.834ENSORLG00015017605eif3ea9672.834Oryzias_latipes_hsok
ENSCSAVG00000006176-9973.302ENSOMEG00000017688eif3ea9673.302Oryzias_melastigma
ENSCSAVG00000006176-10072.664ENSOGAG00000010542EIF3E9672.664Otolemur_garnettii
ENSCSAVG00000006176-10072.664ENSOARG00000014786EIF3E9672.664Ovis_aries
ENSCSAVG00000006176-10072.664ENSPPRG00000018150EIF3E9672.664Panthera_pardus
ENSCSAVG00000006176-10072.430ENSPTIG00000017225EIF3E9672.430Panthera_tigris_altaica
ENSCSAVG00000006176-10072.664ENSPTRG00000020505EIF3E9671.963Pan_troglodytes
ENSCSAVG00000006176-10072.664ENSPANG00000008045EIF3E9671.262Papio_anubis
ENSCSAVG00000006176-10048.605ENSPANG00000030486-9548.605Papio_anubis
ENSCSAVG00000006176-10065.888ENSPKIG00000012995EIF3E9176.389Paramormyrops_kingsleyae
ENSCSAVG00000006176-10073.131ENSPKIG00000014712EIF3E9673.131Paramormyrops_kingsleyae
ENSCSAVG00000006176-10072.664ENSPSIG00000016019EIF3E8672.664Pelodiscus_sinensis
ENSCSAVG00000006176-9973.068ENSPMGG00000000525eif3ea9673.068Periophthalmus_magnuspinnatus
ENSCSAVG00000006176-10067.599ENSPMGG00000023964-9567.599Periophthalmus_magnuspinnatus
ENSCSAVG00000006176-10072.664ENSPEMG00000008528Eif3e9672.664Peromyscus_maniculatus_bairdii
ENSCSAVG00000006176-10072.727ENSPMAG00000002386eif3ea9972.727Petromyzon_marinus
ENSCSAVG00000006176-10073.598ENSPFOG00000017203eif3eb9673.598Poecilia_formosa
ENSCSAVG00000006176-9972.834ENSPFOG00000019233eif3ea9672.834Poecilia_formosa
ENSCSAVG00000006176-9972.834ENSPLAG00000009490eif3ea9672.834Poecilia_latipinna
ENSCSAVG00000006176-10073.598ENSPLAG00000016969eif3eb9673.598Poecilia_latipinna
ENSCSAVG00000006176-9972.600ENSPMEG00000005294eif3ea9672.600Poecilia_mexicana
ENSCSAVG00000006176-10073.832ENSPMEG00000023300eif3eb9673.832Poecilia_mexicana
ENSCSAVG00000006176-9473.540ENSPREG00000014416eif3eb8473.446Poecilia_reticulata
ENSCSAVG00000006176-9972.834ENSPREG00000015021eif3ea9369.789Poecilia_reticulata
ENSCSAVG00000006176-10072.664ENSPPYG00000018819EIF3E9672.664Pongo_abelii
ENSCSAVG00000006176-9174.823ENSPCAG00000005196EIF3E10065.439Procavia_capensis
ENSCSAVG00000006176-10071.028ENSPCOG00000017519EIF3E9671.028Propithecus_coquereli
ENSCSAVG00000006176-10065.421ENSPVAG00000000433EIF3E9964.665Pteropus_vampyrus
ENSCSAVG00000006176-9972.365ENSPNYG00000005169eif3ea9672.365Pundamilia_nyererei
ENSCSAVG00000006176-10073.364ENSPNYG00000006316eif3eb9673.364Pundamilia_nyererei
ENSCSAVG00000006176-9972.600ENSPNAG00000011223eif3ea9672.600Pygocentrus_nattereri
ENSCSAVG00000006176-10072.897ENSPNAG00000021274EIF3E9672.897Pygocentrus_nattereri
ENSCSAVG00000006176-10071.729ENSRNOG00000055247LOC1003650629671.729Rattus_norvegicus
ENSCSAVG00000006176-10071.729ENSRNOG00000060288LOC1009094819671.729Rattus_norvegicus
ENSCSAVG00000006176-10072.664ENSRNOG00000027690Eif3el19672.664Rattus_norvegicus
ENSCSAVG00000006176-10072.196ENSRBIG00000043020EIF3E9671.262Rhinopithecus_bieti
ENSCSAVG00000006176-9458.561ENSRBIG00000017493-9460.950Rhinopithecus_bieti
ENSCSAVG00000006176-10072.664ENSRROG00000033537EIF3E9575.821Rhinopithecus_roxellana
ENSCSAVG00000006176-10072.664ENSSBOG00000030471EIF3E9575.821Saimiri_boliviensis_boliviensis
ENSCSAVG00000006176-10072.897ENSSHAG00000013132EIF3E9672.897Sarcophilus_harrisii
ENSCSAVG00000006176-10073.364ENSSFOG00015009647eif3e9673.364Scleropages_formosus
ENSCSAVG00000006176-9971.897ENSSMAG00000008212eif3ea9671.897Scophthalmus_maximus
ENSCSAVG00000006176-10072.897ENSSMAG00000019198eif3eb9772.897Scophthalmus_maximus
ENSCSAVG00000006176-9972.600ENSSDUG00000009697eif3ea9672.600Seriola_dumerili
ENSCSAVG00000006176-10073.364ENSSDUG00000008518eif3eb9673.364Seriola_dumerili
ENSCSAVG00000006176-9972.600ENSSLDG00000011726eif3ea9672.600Seriola_lalandi_dorsalis
ENSCSAVG00000006176-10073.131ENSSLDG00000000190eif3eb9673.131Seriola_lalandi_dorsalis
ENSCSAVG00000006176-10059.579ENSSARG00000012268EIF3E9659.579Sorex_araneus
ENSCSAVG00000006176-10072.430ENSSPUG00000012601EIF3E9672.430Sphenodon_punctatus
ENSCSAVG00000006176-9972.600ENSSPAG00000014998eif3ea9672.600Stegastes_partitus
ENSCSAVG00000006176-10071.860ENSSPAG00000012527eif3eb9671.860Stegastes_partitus
ENSCSAVG00000006176-10072.664ENSSSCG00000006033EIF3E9672.664Sus_scrofa
ENSCSAVG00000006176-9275.088ENSTGUG00000012216EIF3E9672.457Taeniopygia_guttata
ENSCSAVG00000006176-9971.897ENSTRUG00000005064eif3ea9171.897Takifugu_rubripes
ENSCSAVG00000006176-9174.113ENSTNIG00000015446eif3ea8872.821Tetraodon_nigroviridis
ENSCSAVG00000006176-10072.897ENSTNIG00000004238eif3eb9672.897Tetraodon_nigroviridis
ENSCSAVG00000006176-8268.421ENSTBEG00000010852EIF3E7968.261Tupaia_belangeri
ENSCSAVG00000006176-10072.664ENSTTRG00000011025EIF3E9672.664Tursiops_truncatus
ENSCSAVG00000006176-10072.664ENSUMAG00000020022EIF3E9672.664Ursus_maritimus
ENSCSAVG00000006176-10071.262ENSVPAG00000000929EIF3E9671.262Vicugna_pacos
ENSCSAVG00000006176-10072.664ENSVVUG00000017177EIF3E9672.664Vulpes_vulpes
ENSCSAVG00000006176-9971.028ENSXETG00000003602eif3e9671.028Xenopus_tropicalis
ENSCSAVG00000006176-9970.726ENSXCOG00000016920eif3ea9370.726Xiphophorus_couchianus
ENSCSAVG00000006176-9973.536ENSXMAG00000024808EIF3E9673.536Xiphophorus_maculatus
ENSCSAVG00000006176-9973.770ENSXMAG00000014733eif3eb9673.770Xiphophorus_maculatus

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