EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006200 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1880 bases
Position: chrreftig_76:1333754-1335633
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010544	L51_S25_CI-B8	PF05047.16	6.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010671	-	365	-	ENSCSAVP00000010544	94 (aa)	-	H2YYY3

Gene Model

Click here to download ENSCSAVG00000006200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006200	-	99	51.613	ENSG00000131495	NDUFA2	95	56.944	Homo_sapiens
ENSCSAVG00000006200	-	69	55.385	ENSAPOG00000006666	NDUFA2	68	55.385	Acanthochromis_polyacanthus
ENSCSAVG00000006200	-	93	59.770	ENSAPOG00000013842	ndufa2	88	59.770	Acanthochromis_polyacanthus
ENSCSAVG00000006200	-	99	51.613	ENSAMEG00000010954	NDUFA2	94	51.613	Ailuropoda_melanoleuca
ENSCSAVG00000006200	-	93	59.770	ENSACIG00000022289	ndufa2	87	59.770	Amphilophus_citrinellus
ENSCSAVG00000006200	-	93	58.621	ENSAOCG00000001111	ndufa2	88	58.621	Amphiprion_ocellaris
ENSCSAVG00000006200	-	93	58.621	ENSAPEG00000003711	ndufa2	88	58.621	Amphiprion_percula
ENSCSAVG00000006200	-	89	64.286	ENSATEG00000013837	ndufa2	84	64.286	Anabas_testudineus
ENSCSAVG00000006200	-	88	56.627	ENSACAG00000012978	NDUFA2	82	56.627	Anolis_carolinensis
ENSCSAVG00000006200	-	87	51.807	ENSANAG00000030796	-	83	51.807	Aotus_nancymaae
ENSCSAVG00000006200	-	87	57.317	ENSANAG00000036345	-	91	55.714	Aotus_nancymaae
ENSCSAVG00000006200	-	93	59.770	ENSACLG00000001751	ndufa2	87	59.770	Astatotilapia_calliptera
ENSCSAVG00000006200	-	89	59.302	ENSAMXG00000000818	ndufa2	88	59.302	Astyanax_mexicanus
ENSCSAVG00000006200	-	88	55.422	ENSBTAG00000009274	-	90	55.422	Bos_taurus
ENSCSAVG00000006200	-	88	56.627	ENSBTAG00000015041	NDUFA2	84	56.627	Bos_taurus
ENSCSAVG00000006200	-	88	53.012	ENSBTAG00000047836	-	84	53.012	Bos_taurus
ENSCSAVG00000006200	-	86	54.321	WBGene00013406	Y63D3A.7	88	54.321	Caenorhabditis_elegans
ENSCSAVG00000006200	-	99	52.688	ENSCJAG00000016525	NDUFA2	91	56.338	Callithrix_jacchus
ENSCSAVG00000006200	-	99	50.538	ENSCAFG00000005861	NDUFA2	94	50.538	Canis_familiaris
ENSCSAVG00000006200	-	99	50.538	ENSCAFG00020001429	-	94	50.538	Canis_lupus_dingo
ENSCSAVG00000006200	-	86	46.914	ENSCAFG00020019097	-	82	46.914	Canis_lupus_dingo
ENSCSAVG00000006200	-	88	56.627	ENSCHIG00000027231	NDUFA2	84	56.627	Capra_hircus
ENSCSAVG00000006200	-	99	50.538	ENSTSYG00000008340	NDUFA2	94	50.538	Carlito_syrichta
ENSCSAVG00000006200	-	99	51.613	ENSCPOG00000009178	NDUFA2	94	51.613	Cavia_porcellus
ENSCSAVG00000006200	-	87	57.317	ENSCCAG00000028469	-	83	57.317	Cebus_capucinus
ENSCSAVG00000006200	-	87	57.317	ENSCCAG00000036213	-	91	55.714	Cebus_capucinus
ENSCSAVG00000006200	-	96	52.222	ENSCATG00000043434	-	93	52.222	Cercocebus_atys
ENSCSAVG00000006200	-	88	55.422	ENSCATG00000036702	-	94	51.613	Cercocebus_atys
ENSCSAVG00000006200	-	88	55.422	ENSCLAG00000011804	NDUFA2	88	55.422	Chinchilla_lanigera
ENSCSAVG00000006200	-	99	51.613	ENSCSAG00000012711	NDUFA2	94	51.613	Chlorocebus_sabaeus
ENSCSAVG00000006200	-	98	51.087	ENSCHOG00000002955	NDUFA2	93	51.087	Choloepus_hoffmanni
ENSCSAVG00000006200	-	93	52.874	ENSCPBG00000007654	NDUFA2	86	52.874	Chrysemys_picta_bellii
ENSCSAVG00000006200	-	52	87.755	ENSCING00000014349	-	100	87.755	Ciona_intestinalis
ENSCSAVG00000006200	-	88	53.012	ENSCANG00000020384	-	94	49.462	Colobus_angolensis_palliatus
ENSCSAVG00000006200	-	99	50.538	ENSCANG00000017107	-	94	50.538	Colobus_angolensis_palliatus
ENSCSAVG00000006200	-	99	50.538	ENSCGRG00001022607	-	94	50.538	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006200	-	99	50.538	ENSCGRG00000006383	-	94	50.538	Cricetulus_griseus_crigri
ENSCSAVG00000006200	-	86	56.790	ENSCSEG00000020492	ndufa2	83	58.333	Cynoglossus_semilaevis
ENSCSAVG00000006200	-	82	62.338	ENSCVAG00000019088	ndufa2	84	60.241	Cyprinodon_variegatus
ENSCSAVG00000006200	-	89	61.798	ENSDARG00000021984	ndufa2	88	61.798	Danio_rerio
ENSCSAVG00000006200	-	88	56.627	ENSDNOG00000009777	NDUFA2	84	56.627	Dasypus_novemcinctus
ENSCSAVG00000006200	-	86	53.086	ENSDORG00000006581	Ndufa2	93	48.913	Dipodomys_ordii
ENSCSAVG00000006200	-	85	45.000	FBgn0040705	ND-B8	84	45.000	Drosophila_melanogaster
ENSCSAVG00000006200	-	54	49.020	ENSETEG00000005391	-	91	49.020	Echinops_telfairi
ENSCSAVG00000006200	-	84	53.165	ENSETEG00000011703	-	80	53.165	Echinops_telfairi
ENSCSAVG00000006200	-	88	46.988	ENSEBUG00000012351	ndufa2	83	46.988	Eptatretus_burgeri
ENSCSAVG00000006200	-	88	55.422	ENSEASG00005017518	NDUFA2	65	51.613	Equus_asinus_asinus
ENSCSAVG00000006200	-	68	51.562	ENSECAG00000033774	-	55	51.562	Equus_caballus
ENSCSAVG00000006200	-	99	51.613	ENSECAG00000023131	NDUFA2	94	51.613	Equus_caballus
ENSCSAVG00000006200	-	88	55.422	ENSECAG00000040042	-	65	51.613	Equus_caballus
ENSCSAVG00000006200	-	99	51.613	ENSECAG00000034217	-	94	51.613	Equus_caballus
ENSCSAVG00000006200	-	63	59.322	ENSEEUG00000014212	NDUFA2	88	59.322	Erinaceus_europaeus
ENSCSAVG00000006200	-	93	58.621	ENSELUG00000004074	ndufa2	87	58.621	Esox_lucius
ENSCSAVG00000006200	-	88	55.422	ENSFCAG00000001282	NDUFA2	84	55.422	Felis_catus
ENSCSAVG00000006200	-	71	58.209	ENSFALG00000009502	NDUFA2	76	58.442	Ficedula_albicollis
ENSCSAVG00000006200	-	99	53.763	ENSFDAG00000014288	NDUFA2	94	53.763	Fukomys_damarensis
ENSCSAVG00000006200	-	93	60.920	ENSFHEG00000003533	ndufa2	87	60.920	Fundulus_heteroclitus
ENSCSAVG00000006200	-	89	63.095	ENSGMOG00000005747	ndufa2	88	63.095	Gadus_morhua
ENSCSAVG00000006200	-	89	55.952	ENSGALG00000040626	NDUFA2	84	55.952	Gallus_gallus
ENSCSAVG00000006200	-	93	58.621	ENSGAFG00000022033	ndufa2	87	58.621	Gambusia_affinis
ENSCSAVG00000006200	-	89	58.333	ENSGACG00000020909	ndufa2	80	58.333	Gasterosteus_aculeatus
ENSCSAVG00000006200	-	100	51.515	ENSGAGG00000000053	NDUFA2	88	51.515	Gopherus_agassizii
ENSCSAVG00000006200	-	77	52.778	ENSGGOG00000013369	-	95	52.778	Gorilla_gorilla
ENSCSAVG00000006200	-	93	59.770	ENSHBUG00000009036	ndufa2	87	59.770	Haplochromis_burtoni
ENSCSAVG00000006200	-	88	54.217	ENSHGLG00000009165	NDUFA2	92	51.613	Heterocephalus_glaber_female
ENSCSAVG00000006200	-	99	51.613	ENSHGLG00100003541	NDUFA2	93	51.613	Heterocephalus_glaber_male
ENSCSAVG00000006200	-	88	54.217	ENSHCOG00000008327	-	83	54.217	Hippocampus_comes
ENSCSAVG00000006200	-	64	61.667	ENSHCOG00000018099	ndufa2	62	61.667	Hippocampus_comes
ENSCSAVG00000006200	-	88	59.036	ENSIPUG00000018923	ndufa2	83	59.036	Ictalurus_punctatus
ENSCSAVG00000006200	-	87	46.341	ENSSTOG00000021980	-	83	45.783	Ictidomys_tridecemlineatus
ENSCSAVG00000006200	-	87	46.341	ENSSTOG00000020034	-	83	45.783	Ictidomys_tridecemlineatus
ENSCSAVG00000006200	-	87	54.878	ENSSTOG00000022532	-	84	54.217	Ictidomys_tridecemlineatus
ENSCSAVG00000006200	-	77	61.111	ENSJJAG00000023853	Ndufa2	84	56.627	Jaculus_jaculus
ENSCSAVG00000006200	-	93	59.770	ENSKMAG00000013943	ndufa2	87	59.770	Kryptolebias_marmoratus
ENSCSAVG00000006200	-	89	63.095	ENSLBEG00000017848	ndufa2	84	63.095	Labrus_bergylta
ENSCSAVG00000006200	-	89	54.762	ENSLACG00000005796	NDUFA2	88	54.762	Latimeria_chalumnae
ENSCSAVG00000006200	-	87	58.537	ENSLOCG00000011183	ndufa2	84	58.537	Lepisosteus_oculatus
ENSCSAVG00000006200	-	96	52.222	ENSLAFG00000013494	NDUFA2	91	52.222	Loxodonta_africana
ENSCSAVG00000006200	-	99	51.613	ENSMFAG00000034109	NDUFA2	94	51.613	Macaca_fascicularis
ENSCSAVG00000006200	-	100	52.128	ENSMFAG00000043950	-	98	52.128	Macaca_fascicularis
ENSCSAVG00000006200	-	100	51.064	ENSMMUG00000031056	-	98	51.064	Macaca_mulatta
ENSCSAVG00000006200	-	82	51.948	ENSMMUG00000010011	-	86	51.948	Macaca_mulatta
ENSCSAVG00000006200	-	88	55.422	ENSMNEG00000033708	NDUFA2	95	51.613	Macaca_nemestrina
ENSCSAVG00000006200	-	88	55.422	ENSMLEG00000043870	NDUFA2	94	51.613	Mandrillus_leucophaeus
ENSCSAVG00000006200	-	89	60.714	ENSMAMG00000012521	ndufa2	84	60.714	Mastacembelus_armatus
ENSCSAVG00000006200	-	93	59.770	ENSMZEG00005024955	ndufa2	87	59.770	Maylandia_zebra
ENSCSAVG00000006200	-	87	53.659	ENSMAUG00000015843	Ndufa2	94	49.462	Mesocricetus_auratus
ENSCSAVG00000006200	-	99	51.613	ENSMICG00000047730	NDUFA2	95	53.846	Microcebus_murinus
ENSCSAVG00000006200	-	87	54.878	ENSMOCG00000022078	Ndufa2	94	52.174	Microtus_ochrogaster
ENSCSAVG00000006200	-	89	60.714	ENSMMOG00000017375	ndufa2	84	60.714	Mola_mola
ENSCSAVG00000006200	-	81	59.211	ENSMODG00000011446	NDUFA2	90	59.211	Monodelphis_domestica
ENSCSAVG00000006200	-	89	60.714	ENSMALG00000004525	ndufa2	84	60.714	Monopterus_albus
ENSCSAVG00000006200	-	88	55.422	MGP_CAROLIEiJ_G0022134	Ndufa2	94	52.688	Mus_caroli
ENSCSAVG00000006200	-	88	56.627	ENSMUSG00000014294	Ndufa2	94	53.763	Mus_musculus
ENSCSAVG00000006200	-	88	56.627	MGP_PahariEiJ_G0018868	Ndufa2	94	53.763	Mus_pahari
ENSCSAVG00000006200	-	99	52.688	MGP_SPRETEiJ_G0023046	Ndufa2	94	52.688	Mus_spretus
ENSCSAVG00000006200	-	85	55.000	ENSNGAG00000023938	Ndufa2	90	51.685	Nannospalax_galili
ENSCSAVG00000006200	-	90	48.235	ENSNBRG00000024208	ndufa2	78	56.250	Neolamprologus_brichardi
ENSCSAVG00000006200	-	74	55.714	ENSNLEG00000009325	-	92	55.714	Nomascus_leucogenys
ENSCSAVG00000006200	-	99	49.462	ENSNLEG00000018728	-	94	49.462	Nomascus_leucogenys
ENSCSAVG00000006200	-	88	55.422	ENSOPRG00000006769	NDUFA2	93	52.688	Ochotona_princeps
ENSCSAVG00000006200	-	98	50.000	ENSODEG00000020485	-	93	50.000	Octodon_degus
ENSCSAVG00000006200	-	88	53.012	ENSODEG00000003215	-	91	57.143	Octodon_degus
ENSCSAVG00000006200	-	88	54.217	ENSODEG00000019176	-	94	51.613	Octodon_degus
ENSCSAVG00000006200	-	99	51.613	ENSODEG00000019964	-	94	51.613	Octodon_degus
ENSCSAVG00000006200	-	93	60.920	ENSONIG00000017823	ndufa2	86	60.920	Oreochromis_niloticus
ENSCSAVG00000006200	-	91	56.977	ENSOANG00000011664	NDUFA2	86	56.977	Ornithorhynchus_anatinus
ENSCSAVG00000006200	-	99	52.688	ENSOCUG00000004237	NDUFA2	94	52.688	Oryctolagus_cuniculus
ENSCSAVG00000006200	-	89	58.333	ENSORLG00020013209	ndufa2	84	58.333	Oryzias_latipes_hni
ENSCSAVG00000006200	-	89	58.333	ENSORLG00015020502	ndufa2	68	58.333	Oryzias_latipes_hsok
ENSCSAVG00000006200	-	89	58.333	ENSOMEG00000009555	ndufa2	84	58.333	Oryzias_melastigma
ENSCSAVG00000006200	-	88	55.422	ENSOGAG00000027727	NDUFA2	94	51.613	Otolemur_garnettii
ENSCSAVG00000006200	-	88	56.627	ENSOARG00000018374	NDUFA2	84	56.627	Ovis_aries
ENSCSAVG00000006200	-	77	55.556	ENSPPAG00000029576	-	95	55.556	Pan_paniscus
ENSCSAVG00000006200	-	88	55.422	ENSPPRG00000010914	NDUFA2	84	55.422	Panthera_pardus
ENSCSAVG00000006200	-	88	55.422	ENSPTIG00000018315	NDUFA2	84	55.422	Panthera_tigris_altaica
ENSCSAVG00000006200	-	77	55.556	ENSPTRG00000017321	NDUFA2	95	55.556	Pan_troglodytes
ENSCSAVG00000006200	-	99	51.613	ENSPANG00000035408	NDUFA2	94	51.613	Papio_anubis
ENSCSAVG00000006200	-	89	58.333	ENSPKIG00000020504	ndufa2	84	58.333	Paramormyrops_kingsleyae
ENSCSAVG00000006200	-	89	60.714	ENSPMGG00000014428	ndufa2	75	60.714	Periophthalmus_magnuspinnatus
ENSCSAVG00000006200	-	100	44.211	ENSPMAG00000005704	ndufa2	98	44.211	Petromyzon_marinus
ENSCSAVG00000006200	-	94	53.409	ENSPCIG00000017487	NDUFA2	88	53.409	Phascolarctos_cinereus
ENSCSAVG00000006200	-	93	58.621	ENSPFOG00000018964	ndufa2	86	58.621	Poecilia_formosa
ENSCSAVG00000006200	-	93	58.621	ENSPLAG00000000753	ndufa2	87	58.621	Poecilia_latipinna
ENSCSAVG00000006200	-	93	58.621	ENSPMEG00000023725	ndufa2	87	58.621	Poecilia_mexicana
ENSCSAVG00000006200	-	93	58.621	ENSPREG00000003425	ndufa2	87	58.621	Poecilia_reticulata
ENSCSAVG00000006200	-	96	52.222	ENSPPYG00000015860	NDUFA2	87	52.222	Pongo_abelii
ENSCSAVG00000006200	-	84	56.962	ENSPCAG00000001406	NDUFA2	80	56.962	Procavia_capensis
ENSCSAVG00000006200	-	99	48.387	ENSPCOG00000020967	-	77	48.387	Propithecus_coquereli
ENSCSAVG00000006200	-	99	51.613	ENSPCOG00000028037	-	92	55.714	Propithecus_coquereli
ENSCSAVG00000006200	-	88	55.422	ENSPVAG00000009708	NDUFA2	84	55.422	Pteropus_vampyrus
ENSCSAVG00000006200	-	93	51.724	ENSPNYG00000021988	ndufa2	87	51.724	Pundamilia_nyererei
ENSCSAVG00000006200	-	89	56.471	ENSPNAG00000020959	ndufa2	60	56.471	Pygocentrus_nattereri
ENSCSAVG00000006200	-	99	47.312	ENSRNOG00000043512	AABR07005040.1	94	47.312	Rattus_norvegicus
ENSCSAVG00000006200	-	99	50.538	ENSRNOG00000017571	Ndufa2	96	50.538	Rattus_norvegicus
ENSCSAVG00000006200	-	69	58.462	ENSRBIG00000032428	NDUFA2	62	58.462	Rhinopithecus_bieti
ENSCSAVG00000006200	-	99	51.613	ENSRROG00000044049	-	92	55.714	Rhinopithecus_roxellana
ENSCSAVG00000006200	-	87	56.098	ENSSBOG00000021588	NDUFA2	94	53.846	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006200	-	89	59.524	ENSSMAG00000016030	ndufa2	84	59.524	Scophthalmus_maximus
ENSCSAVG00000006200	-	89	61.905	ENSSDUG00000023250	ndufa2	84	61.905	Seriola_dumerili
ENSCSAVG00000006200	-	97	58.947	ENSSLDG00000015546	ndufa2	95	58.947	Seriola_lalandi_dorsalis
ENSCSAVG00000006200	-	99	52.688	ENSSARG00000007407	NDUFA2	94	52.688	Sorex_araneus
ENSCSAVG00000006200	-	100	51.515	ENSSPUG00000015789	NDUFA2	98	51.515	Sphenodon_punctatus
ENSCSAVG00000006200	-	93	59.770	ENSSPAG00000020042	ndufa2	87	59.770	Stegastes_partitus
ENSCSAVG00000006200	-	99	51.613	ENSSSCG00000014371	-	94	51.613	Sus_scrofa
ENSCSAVG00000006200	-	99	46.237	ENSSSCG00000027246	-	94	46.237	Sus_scrofa
ENSCSAVG00000006200	-	89	63.095	ENSTRUG00000022054	ndufa2	84	63.095	Takifugu_rubripes
ENSCSAVG00000006200	-	89	64.286	ENSTNIG00000004393	ndufa2	83	64.286	Tetraodon_nigroviridis
ENSCSAVG00000006200	-	88	55.422	ENSTBEG00000005978	NDUFA2	83	55.422	Tupaia_belangeri
ENSCSAVG00000006200	-	96	51.111	ENSTTRG00000010388	NDUFA2	91	51.111	Tursiops_truncatus
ENSCSAVG00000006200	-	64	51.667	ENSTTRG00000005579	-	92	51.667	Tursiops_truncatus
ENSCSAVG00000006200	-	99	52.688	ENSUAMG00000005636	NDUFA2	94	52.688	Ursus_americanus
ENSCSAVG00000006200	-	71	59.701	ENSUMAG00000013234	NDUFA2	63	59.701	Ursus_maritimus
ENSCSAVG00000006200	-	88	54.217	ENSVVUG00000012989	NDUFA2	84	54.217	Vulpes_vulpes
ENSCSAVG00000006200	-	81	59.211	ENSXETG00000031397	ndufa2	76	59.211	Xenopus_tropicalis
ENSCSAVG00000006200	-	81	59.211	ENSXETG00000034248	-	75	59.211	Xenopus_tropicalis
ENSCSAVG00000006200	-	93	58.621	ENSXCOG00000018046	ndufa2	87	58.621	Xiphophorus_couchianus
ENSCSAVG00000006200	-	93	58.621	ENSXMAG00000006496	ndufa2	87	58.621	Xiphophorus_maculatus