EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006210 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5894 bases
Position: chrreftig_60:449178-455071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010557	zf-CCCH	PF00642.24	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010685	-	1154	-	ENSCSAVP00000010557	322 (aa)	-	H2YYZ6

Gene Model

Click here to download ENSCSAVG00000006210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006210	-	94	61.755	ENSG00000125352	RNF113A	83	65.263	Homo_sapiens
ENSCSAVG00000006210	-	75	58.506	ENSG00000139797	RNF113B	69	61.607	Homo_sapiens
ENSCSAVG00000006210	-	90	66.212	ENSAPOG00000017510	rnf113a	82	69.318	Acanthochromis_polyacanthus
ENSCSAVG00000006210	-	93	60.317	ENSAMEG00000019845	-	69	69.835	Ailuropoda_melanoleuca
ENSCSAVG00000006210	-	70	66.518	ENSACIG00000007458	rnf113a	70	66.518	Amphilophus_citrinellus
ENSCSAVG00000006210	-	90	66.212	ENSAOCG00000003485	rnf113a	82	69.318	Amphiprion_ocellaris
ENSCSAVG00000006210	-	90	66.212	ENSAPEG00000001084	rnf113a	82	69.318	Amphiprion_percula
ENSCSAVG00000006210	-	92	65.894	ENSATEG00000022950	rnf113a	82	69.697	Anabas_testudineus
ENSCSAVG00000006210	-	77	71.486	ENSAPLG00000012510	-	85	73.160	Anas_platyrhynchos
ENSCSAVG00000006210	-	86	66.071	ENSACAG00000012485	-	69	75.576	Anolis_carolinensis
ENSCSAVG00000006210	-	92	62.295	ENSANAG00000013925	-	87	63.423	Aotus_nancymaae
ENSCSAVG00000006210	-	89	64.505	ENSANAG00000024332	-	87	64.505	Aotus_nancymaae
ENSCSAVG00000006210	-	85	54.909	ENSANAG00000020431	RNF113B	69	62.946	Aotus_nancymaae
ENSCSAVG00000006210	-	90	66.327	ENSACLG00000025256	rnf113a	81	69.582	Astatotilapia_calliptera
ENSCSAVG00000006210	-	95	65.161	ENSAMXG00000011273	rnf113a	82	71.483	Astyanax_mexicanus
ENSCSAVG00000006210	-	83	62.731	ENSBTAG00000008684	-	64	69.643	Bos_taurus
ENSCSAVG00000006210	-	89	63.014	ENSBTAG00000006034	RNF113A	65	73.214	Bos_taurus
ENSCSAVG00000006210	-	88	47.440	WBGene00010476	rnf-113	58	52.423	Caenorhabditis_elegans
ENSCSAVG00000006210	-	76	61.475	ENSCJAG00000004501	RNF113B	69	65.179	Callithrix_jacchus
ENSCSAVG00000006210	-	92	61.039	ENSCJAG00000022327	RNF113A	78	66.418	Callithrix_jacchus
ENSCSAVG00000006210	-	94	59.877	ENSCAFG00000018430	-	93	60.494	Canis_familiaris
ENSCSAVG00000006210	-	70	63.717	ENSCAFG00000018373	-	64	63.839	Canis_familiaris
ENSCSAVG00000006210	-	70	63.717	ENSCAFG00020020280	-	64	63.839	Canis_lupus_dingo
ENSCSAVG00000006210	-	94	59.877	ENSCAFG00020004044	-	93	60.494	Canis_lupus_dingo
ENSCSAVG00000006210	-	89	62.671	ENSCHIG00000018820	-	65	72.768	Capra_hircus
ENSCSAVG00000006210	-	90	59.596	ENSCHIG00000015616	-	65	69.058	Capra_hircus
ENSCSAVG00000006210	-	94	60.625	ENSTSYG00000001308	RNF113A	83	64.336	Carlito_syrichta
ENSCSAVG00000006210	-	93	64.379	ENSCPOG00000038517	-	91	63.725	Cavia_porcellus
ENSCSAVG00000006210	-	92	61.688	ENSCCAG00000013617	RNF113A	78	67.164	Cebus_capucinus
ENSCSAVG00000006210	-	85	57.091	ENSCCAG00000021327	RNF113B	69	65.179	Cebus_capucinus
ENSCSAVG00000006210	-	92	63.312	ENSCATG00000002702	RNF113A	77	67.790	Cercocebus_atys
ENSCSAVG00000006210	-	90	61.258	ENSCLAG00000017479	-	64	73.094	Chinchilla_lanigera
ENSCSAVG00000006210	-	75	60.581	ENSCSAG00000000222	RNF113B	66	63.839	Chlorocebus_sabaeus
ENSCSAVG00000006210	-	92	53.846	ENSCSAG00000019472	-	69	64.502	Chlorocebus_sabaeus
ENSCSAVG00000006210	-	74	62.917	ENSCHOG00000008711	-	80	66.512	Choloepus_hoffmanni
ENSCSAVG00000006210	-	94	65.595	ENSCPBG00000026980	-	96	63.871	Chrysemys_picta_bellii
ENSCSAVG00000006210	-	100	81.846	ENSCING00000009197	-	100	81.231	Ciona_intestinalis
ENSCSAVG00000006210	-	72	59.914	ENSCANG00000041552	RNF113B	70	61.161	Colobus_angolensis_palliatus
ENSCSAVG00000006210	-	94	62.382	ENSCANG00000037715	RNF113A	83	65.263	Colobus_angolensis_palliatus
ENSCSAVG00000006210	-	93	63.072	ENSCGRG00001002251	Rnf113a1	89	62.092	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006210	-	93	62.745	ENSCGRG00000019441	Rnf113a1	89	61.765	Cricetulus_griseus_crigri
ENSCSAVG00000006210	-	93	62.136	ENSCGRG00000016675	Rnf113a2	84	64.211	Cricetulus_griseus_crigri
ENSCSAVG00000006210	-	92	64.901	ENSCSEG00000021570	rnf113a	70	68.561	Cynoglossus_semilaevis
ENSCSAVG00000006210	-	94	64.194	ENSCVAG00000011305	rnf113a	84	67.279	Cyprinodon_variegatus
ENSCSAVG00000006210	-	90	68.041	ENSDARG00000037930	rnf113a	81	71.756	Danio_rerio
ENSCSAVG00000006210	-	93	61.613	ENSDORG00000027624	Rnf113a2	84	64.211	Dipodomys_ordii
ENSCSAVG00000006210	-	96	52.615	FBgn0038772	mdlc	64	62.882	Drosophila_melanogaster
ENSCSAVG00000006210	-	89	64.483	ENSETEG00000018346	-	77	68.302	Echinops_telfairi
ENSCSAVG00000006210	-	90	64.505	ENSEBUG00000016079	rnf113a	90	64.164	Eptatretus_burgeri
ENSCSAVG00000006210	-	94	59.875	ENSEASG00005010538	-	83	61.972	Equus_asinus_asinus
ENSCSAVG00000006210	-	90	61.462	ENSECAG00000004638	-	83	64.662	Equus_caballus
ENSCSAVG00000006210	-	94	62.187	ENSECAG00000003934	-	83	64.336	Equus_caballus
ENSCSAVG00000006210	-	91	65.667	ENSELUG00000020657	rnf113a	82	69.962	Esox_lucius
ENSCSAVG00000006210	-	90	62.458	ENSFCAG00000024392	-	85	63.123	Felis_catus
ENSCSAVG00000006210	-	90	62.791	ENSFCAG00000025700	-	87	63.455	Felis_catus
ENSCSAVG00000006210	-	82	65.789	ENSFCAG00000028962	-	65	71.875	Felis_catus
ENSCSAVG00000006210	-	85	66.667	ENSFALG00000004633	-	76	72.727	Ficedula_albicollis
ENSCSAVG00000006210	-	82	69.173	ENSFHEG00000023305	rnf113a	82	68.939	Fundulus_heteroclitus
ENSCSAVG00000006210	-	91	63.607	ENSGMOG00000004541	rnf113a	83	65.818	Gadus_morhua
ENSCSAVG00000006210	-	90	65.993	ENSGALG00000000538	RNF113A	92	64.145	Gallus_gallus
ENSCSAVG00000006210	-	90	69.283	ENSGAFG00000011863	rnf113a	81	72.348	Gambusia_affinis
ENSCSAVG00000006210	-	92	64.803	ENSGACG00000009738	rnf113a	82	68.519	Gasterosteus_aculeatus
ENSCSAVG00000006210	-	94	64.839	ENSGAGG00000020490	-	96	63.226	Gopherus_agassizii
ENSCSAVG00000006210	-	94	61.755	ENSGGOG00000002324	RNF113A	83	65.263	Gorilla_gorilla
ENSCSAVG00000006210	-	75	59.336	ENSGGOG00000023052	RNF113B	69	62.500	Gorilla_gorilla
ENSCSAVG00000006210	-	90	66.667	ENSHBUG00000008626	rnf113a	81	69.962	Haplochromis_burtoni
ENSCSAVG00000006210	-	90	61.745	ENSHGLG00000019571	-	65	72.646	Heterocephalus_glaber_female
ENSCSAVG00000006210	-	90	60.197	ENSHGLG00100019582	-	64	72.646	Heterocephalus_glaber_male
ENSCSAVG00000006210	-	93	65.116	ENSHCOG00000003421	rnf113a	84	67.647	Hippocampus_comes
ENSCSAVG00000006210	-	90	68.259	ENSIPUG00000013431	RNF113A	82	72.348	Ictalurus_punctatus
ENSCSAVG00000006210	-	93	61.489	ENSSTOG00000019866	-	67	71.186	Ictidomys_tridecemlineatus
ENSCSAVG00000006210	-	70	52.863	ENSJJAG00000019849	Rnf113a1	72	53.812	Jaculus_jaculus
ENSCSAVG00000006210	-	92	66.556	ENSKMAG00000009830	rnf113a	93	66.225	Kryptolebias_marmoratus
ENSCSAVG00000006210	-	92	66.443	ENSLBEG00000004627	rnf113a	82	70.833	Labrus_bergylta
ENSCSAVG00000006210	-	93	62.791	ENSLACG00000013178	rnf113a	83	66.667	Latimeria_chalumnae
ENSCSAVG00000006210	-	94	63.518	ENSLOCG00000011785	rnf113a	86	67.266	Lepisosteus_oculatus
ENSCSAVG00000006210	-	82	68.797	ENSLAFG00000013906	-	77	67.669	Loxodonta_africana
ENSCSAVG00000006210	-	92	63.312	ENSMFAG00000018472	RNF113A	77	67.790	Macaca_fascicularis
ENSCSAVG00000006210	-	92	63.312	ENSMMUG00000020223	RNF113A	77	67.790	Macaca_mulatta
ENSCSAVG00000006210	-	92	63.312	ENSMNEG00000019778	RNF113A	77	67.790	Macaca_nemestrina
ENSCSAVG00000006210	-	79	56.757	ENSMLEG00000038757	RNF113B	75	62.500	Mandrillus_leucophaeus
ENSCSAVG00000006210	-	92	63.312	ENSMLEG00000020750	RNF113A	77	67.790	Mandrillus_leucophaeus
ENSCSAVG00000006210	-	92	64.238	ENSMAMG00000021895	rnf113a	82	68.182	Mastacembelus_armatus
ENSCSAVG00000006210	-	90	66.327	ENSMZEG00005023086	rnf113a	81	69.582	Maylandia_zebra
ENSCSAVG00000006210	-	84	69.231	ENSMGAG00000001753	-	80	72.574	Meleagris_gallopavo
ENSCSAVG00000006210	-	93	61.589	ENSMICG00000038084	-	88	60.927	Microcebus_murinus
ENSCSAVG00000006210	-	94	60.125	ENSMICG00000001750	-	70	69.421	Microcebus_murinus
ENSCSAVG00000006210	-	91	63.636	ENSMOCG00000005370	-	85	62.290	Microtus_ochrogaster
ENSCSAVG00000006210	-	92	66.443	ENSMMOG00000016954	rnf113a	82	70.722	Mola_mola
ENSCSAVG00000006210	-	92	58.940	ENSMALG00000007938	rnf113a	81	62.500	Monopterus_albus
ENSCSAVG00000006210	-	93	61.489	MGP_CAROLIEiJ_G0017943	Rnf113a2	71	70.124	Mus_caroli
ENSCSAVG00000006210	-	93	61.489	ENSMUSG00000098134	Rnf113a2	71	70.124	Mus_musculus
ENSCSAVG00000006210	-	93	63.072	ENSMUSG00000036537	Rnf113a1	89	62.092	Mus_musculus
ENSCSAVG00000006210	-	93	61.489	MGP_PahariEiJ_G0029702	Rnf113a2	71	70.124	Mus_pahari
ENSCSAVG00000006210	-	93	63.072	MGP_PahariEiJ_G0031547	Rnf113a1	89	62.092	Mus_pahari
ENSCSAVG00000006210	-	93	61.489	MGP_SPRETEiJ_G0018788	Rnf113a2	71	70.124	Mus_spretus
ENSCSAVG00000006210	-	93	63.072	MGP_SPRETEiJ_G0034156	Rnf113a1	89	62.092	Mus_spretus
ENSCSAVG00000006210	-	94	60.681	ENSMPUG00000019358	-	93	61.300	Mustela_putorius_furo
ENSCSAVG00000006210	-	94	58.991	ENSMLUG00000010856	-	68	69.198	Myotis_lucifugus
ENSCSAVG00000006210	-	86	64.437	ENSMLUG00000016812	-	67	70.763	Myotis_lucifugus
ENSCSAVG00000006210	-	90	66.327	ENSNBRG00000004314	rnf113a	81	69.582	Neolamprologus_brichardi
ENSCSAVG00000006210	-	93	62.581	ENSNLEG00000018333	RNF113A	90	62.258	Nomascus_leucogenys
ENSCSAVG00000006210	-	89	52.613	ENSNLEG00000007844	RNF113B	69	61.607	Nomascus_leucogenys
ENSCSAVG00000006210	-	90	61.238	ENSMEUG00000001855	-	67	74.107	Notamacropus_eugenii
ENSCSAVG00000006210	-	90	67.347	ENSONIG00000000741	rnf113a	91	67.347	Oreochromis_niloticus
ENSCSAVG00000006210	-	92	60.927	ENSOANG00000002592	-	70	69.915	Ornithorhynchus_anatinus
ENSCSAVG00000006210	-	89	64.505	ENSOCUG00000016207	-	65	73.214	Oryctolagus_cuniculus
ENSCSAVG00000006210	-	92	66.887	ENSORLG00000002442	rnf113a	82	70.455	Oryzias_latipes
ENSCSAVG00000006210	-	92	66.556	ENSORLG00020011512	rnf113a	82	69.962	Oryzias_latipes_hni
ENSCSAVG00000006210	-	92	66.887	ENSORLG00015004382	rnf113a	82	70.455	Oryzias_latipes_hsok
ENSCSAVG00000006210	-	92	66.887	ENSOMEG00000020197	rnf113a	81	70.722	Oryzias_melastigma
ENSCSAVG00000006210	-	93	63.548	ENSOGAG00000031602	RNF113A	70	69.835	Otolemur_garnettii
ENSCSAVG00000006210	-	90	61.204	ENSOGAG00000011638	RNF113B	65	70.536	Otolemur_garnettii
ENSCSAVG00000006210	-	83	62.593	ENSOARG00000015294	-	64	69.058	Ovis_aries
ENSCSAVG00000006210	-	89	62.671	ENSOARG00000009771	-	65	72.768	Ovis_aries
ENSCSAVG00000006210	-	94	61.755	ENSPPAG00000009537	RNF113A	70	70.248	Pan_paniscus
ENSCSAVG00000006210	-	75	59.336	ENSPPAG00000040641	RNF113B	69	62.500	Pan_paniscus
ENSCSAVG00000006210	-	90	62.791	ENSPPRG00000011512	-	87	63.455	Panthera_pardus
ENSCSAVG00000006210	-	82	65.414	ENSPPRG00000020640	-	65	71.429	Panthera_pardus
ENSCSAVG00000006210	-	90	62.791	ENSPTIG00000007986	-	87	63.455	Panthera_tigris_altaica
ENSCSAVG00000006210	-	94	61.755	ENSPTRG00000022231	RNF113A	70	70.248	Pan_troglodytes
ENSCSAVG00000006210	-	75	59.336	ENSPTRG00000005987	RNF113B	69	62.500	Pan_troglodytes
ENSCSAVG00000006210	-	92	63.312	ENSPANG00000011522	RNF113A	77	67.790	Papio_anubis
ENSCSAVG00000006210	-	90	67.235	ENSPKIG00000016796	rnf113a	82	70.342	Paramormyrops_kingsleyae
ENSCSAVG00000006210	-	84	69.231	ENSPSIG00000012676	-	77	75.446	Pelodiscus_sinensis
ENSCSAVG00000006210	-	92	67.327	ENSPMGG00000009668	rnf113a	93	65.677	Periophthalmus_magnuspinnatus
ENSCSAVG00000006210	-	93	62.866	ENSPEMG00000002490	Rnf113a1	89	62.215	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006210	-	84	71.691	ENSPMAG00000005184	rnf113a	76	78.571	Petromyzon_marinus
ENSCSAVG00000006210	-	90	63.871	ENSPCIG00000028916	-	64	75.446	Phascolarctos_cinereus
ENSCSAVG00000006210	-	90	68.259	ENSPFOG00000014248	rnf113a	81	71.212	Poecilia_formosa
ENSCSAVG00000006210	-	90	68.259	ENSPLAG00000010435	rnf113a	81	71.212	Poecilia_latipinna
ENSCSAVG00000006210	-	90	68.601	ENSPMEG00000010641	rnf113a	81	71.591	Poecilia_mexicana
ENSCSAVG00000006210	-	90	68.601	ENSPREG00000009900	rnf113a	81	71.591	Poecilia_reticulata
ENSCSAVG00000006210	-	76	59.836	ENSPPYG00000005460	RNF113B	70	63.839	Pongo_abelii
ENSCSAVG00000006210	-	94	61.442	ENSPPYG00000020676	RNF113A	83	64.912	Pongo_abelii
ENSCSAVG00000006210	-	93	63.636	ENSPCAG00000014633	-	70	70.248	Procavia_capensis
ENSCSAVG00000006210	-	91	58.497	ENSPCOG00000005671	-	64	70.089	Propithecus_coquereli
ENSCSAVG00000006210	-	90	66.327	ENSPNYG00000013863	rnf113a	81	69.582	Pundamilia_nyererei
ENSCSAVG00000006210	-	96	65.916	ENSPNAG00000017428	rnf113a	82	72.348	Pygocentrus_nattereri
ENSCSAVG00000006210	-	93	63.072	ENSRNOG00000059412	Rnf113a1	82	64.539	Rattus_norvegicus
ENSCSAVG00000006210	-	93	63.072	ENSRNOG00000034040	LOC108348079	82	64.539	Rattus_norvegicus
ENSCSAVG00000006210	-	94	62.382	ENSRBIG00000017389	RNF113A	83	65.263	Rhinopithecus_bieti
ENSCSAVG00000006210	-	75	59.336	ENSRBIG00000036094	RNF113B	69	62.500	Rhinopithecus_bieti
ENSCSAVG00000006210	-	75	59.336	ENSRROG00000045661	RNF113B	69	62.500	Rhinopithecus_roxellana
ENSCSAVG00000006210	-	94	62.382	ENSRROG00000012149	RNF113A	83	65.263	Rhinopithecus_roxellana
ENSCSAVG00000006210	-	70	66.222	ENSSBOG00000029719	RNF113B	69	66.071	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006210	-	94	60.502	ENSSBOG00000017704	RNF113A	83	64.336	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006210	-	92	62.136	ENSSHAG00000008839	-	66	72.103	Sarcophilus_harrisii
ENSCSAVG00000006210	-	90	65.870	ENSSFOG00015016567	rnf113a	81	69.202	Scleropages_formosus
ENSCSAVG00000006210	-	92	65.101	ENSSMAG00000009235	rnf113a	83	68.914	Scophthalmus_maximus
ENSCSAVG00000006210	-	92	66.556	ENSSDUG00000022244	rnf113a	82	70.833	Seriola_dumerili
ENSCSAVG00000006210	-	92	66.556	ENSSLDG00000018582	rnf113a	82	70.833	Seriola_lalandi_dorsalis
ENSCSAVG00000006210	-	93	61.935	ENSSARG00000010436	-	78	66.667	Sorex_araneus
ENSCSAVG00000006210	-	90	64.527	ENSSPUG00000018786	-	62	75.000	Sphenodon_punctatus
ENSCSAVG00000006210	-	92	64.803	ENSSPAG00000013187	rnf113a	82	69.318	Stegastes_partitus
ENSCSAVG00000006210	-	93	60.129	ENSSSCG00000032973	-	70	66.942	Sus_scrofa
ENSCSAVG00000006210	-	88	66.316	ENSTGUG00000001947	-	84	66.667	Taeniopygia_guttata
ENSCSAVG00000006210	-	93	65.017	ENSTRUG00000011142	rnf113a	84	69.742	Takifugu_rubripes
ENSCSAVG00000006210	-	90	65.646	ENSTNIG00000014938	rnf113a	82	69.811	Tetraodon_nigroviridis
ENSCSAVG00000006210	-	94	60.000	ENSTBEG00000012687	-	70	69.835	Tupaia_belangeri
ENSCSAVG00000006210	-	81	66.165	ENSUAMG00000024564	-	66	73.214	Ursus_americanus
ENSCSAVG00000006210	-	81	66.165	ENSUMAG00000002167	-	67	73.214	Ursus_maritimus
ENSCSAVG00000006210	-	84	64.260	ENSVPAG00000004521	-	71	70.270	Vicugna_pacos
ENSCSAVG00000006210	-	58	59.474	ENSVVUG00000004522	-	64	58.947	Vulpes_vulpes
ENSCSAVG00000006210	-	94	59.877	ENSVVUG00000011662	-	69	69.835	Vulpes_vulpes
ENSCSAVG00000006210	-	90	68.027	ENSXETG00000002042	rnf113a	92	67.687	Xenopus_tropicalis
ENSCSAVG00000006210	-	88	68.182	ENSXCOG00000017542	rnf113a	82	71.206	Xiphophorus_couchianus
ENSCSAVG00000006210	-	90	69.492	ENSXMAG00000008169	rnf113a	81	71.591	Xiphophorus_maculatus