EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006333 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 959 bases
Position: chrreftig_4:627150-628108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010794	Ribosomal_S16	PF00886.19	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000010925	-	687	-	ENSCSAVP00000010794	172 (aa)	-	H2YZN2

Gene Model

Click here to download ENSCSAVG00000006333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006333	-	72	47.200	ENSG00000182180	MRPS16	86	52.941	Homo_sapiens
ENSCSAVG00000006333	-	55	54.082	ENSAPOG00000012117	mrps16	87	47.541	Acanthochromis_polyacanthus
ENSCSAVG00000006333	-	66	51.304	ENSAMEG00000016931	MRPS16	88	51.304	Ailuropoda_melanoleuca
ENSCSAVG00000006333	-	62	51.376	ENSACIG00000008004	mrps16	78	51.376	Amphilophus_citrinellus
ENSCSAVG00000006333	-	55	54.082	ENSAOCG00000006801	mrps16	82	50.000	Amphiprion_ocellaris
ENSCSAVG00000006333	-	55	53.061	ENSAPEG00000004562	mrps16	82	49.138	Amphiprion_percula
ENSCSAVG00000006333	-	67	48.361	ENSATEG00000024962	mrps16	87	48.361	Anabas_testudineus
ENSCSAVG00000006333	-	67	48.276	ENSANAG00000036208	MRPS16	85	48.276	Aotus_nancymaae
ENSCSAVG00000006333	-	67	49.153	ENSACLG00000016154	mrps16	85	50.420	Astatotilapia_calliptera
ENSCSAVG00000006333	-	56	52.475	ENSAMXG00000040279	mrps16	94	46.825	Astyanax_mexicanus
ENSCSAVG00000006333	-	52	49.451	ENSBTAG00000053412	-	83	49.451	Bos_taurus
ENSCSAVG00000006333	-	71	50.000	ENSBTAG00000000950	MRPS16	92	50.000	Bos_taurus
ENSCSAVG00000006333	-	67	47.414	ENSCJAG00000007538	MRPS16	85	47.414	Callithrix_jacchus
ENSCSAVG00000006333	-	66	51.304	ENSCAFG00000031286	-	58	51.304	Canis_familiaris
ENSCSAVG00000006333	-	69	35.833	ENSCAFG00000008928	-	90	35.833	Canis_familiaris
ENSCSAVG00000006333	-	59	51.485	ENSCAFG00020025503	-	90	48.246	Canis_lupus_dingo
ENSCSAVG00000006333	-	66	50.435	ENSCAFG00020023773	-	85	50.435	Canis_lupus_dingo
ENSCSAVG00000006333	-	54	47.872	ENSCHIG00000016255	-	68	47.872	Capra_hircus
ENSCSAVG00000006333	-	67	49.138	ENSTSYG00000034400	-	86	49.138	Carlito_syrichta
ENSCSAVG00000006333	-	72	40.800	ENSCAPG00000015053	MRPS16	96	40.800	Cavia_aperea
ENSCSAVG00000006333	-	72	46.400	ENSCPOG00000025500	MRPS16	93	46.400	Cavia_porcellus
ENSCSAVG00000006333	-	67	49.138	ENSCCAG00000037051	MRPS16	82	53.750	Cebus_capucinus
ENSCSAVG00000006333	-	71	47.581	ENSCATG00000040457	MRPS16	91	47.581	Cercocebus_atys
ENSCSAVG00000006333	-	71	47.581	ENSCLAG00000010443	MRPS16	92	47.581	Chinchilla_lanigera
ENSCSAVG00000006333	-	67	48.276	ENSCSAG00000018977	-	85	48.276	Chlorocebus_sabaeus
ENSCSAVG00000006333	-	67	48.276	ENSCSAG00000018976	-	85	48.276	Chlorocebus_sabaeus
ENSCSAVG00000006333	-	67	48.276	ENSCSAG00000000413	-	85	48.276	Chlorocebus_sabaeus
ENSCSAVG00000006333	-	66	48.696	ENSCHOG00000012520	MRPS16	88	48.696	Choloepus_hoffmanni
ENSCSAVG00000006333	-	62	46.296	ENSCPBG00000022282	MRPS16	84	46.296	Chrysemys_picta_bellii
ENSCSAVG00000006333	-	89	84.967	ENSCING00000024826	-	99	84.431	Ciona_intestinalis
ENSCSAVG00000006333	-	72	48.800	ENSCANG00000010568	MRPS16	86	55.294	Colobus_angolensis_palliatus
ENSCSAVG00000006333	-	67	50.000	ENSCGRG00001023386	Mrps16	86	50.000	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006333	-	67	50.000	ENSCGRG00000002182	Mrps16	86	50.000	Cricetulus_griseus_crigri
ENSCSAVG00000006333	-	70	44.531	ENSCSEG00000021662	mrps16	93	44.531	Cynoglossus_semilaevis
ENSCSAVG00000006333	-	66	47.863	ENSCVAG00000012001	mrps16	87	51.695	Cyprinodon_variegatus
ENSCSAVG00000006333	-	64	48.649	ENSDARG00000098972	mrps16	84	48.649	Danio_rerio
ENSCSAVG00000006333	-	59	53.922	ENSDNOG00000047675	MRPS16	86	49.573	Dasypus_novemcinctus
ENSCSAVG00000006333	-	72	48.800	ENSDORG00000008275	-	93	48.800	Dipodomys_ordii
ENSCSAVG00000006333	-	66	38.136	FBgn0033907	mRpS16	88	38.136	Drosophila_melanogaster
ENSCSAVG00000006333	-	55	46.875	ENSEBUG00000001088	mrps16	82	46.875	Eptatretus_burgeri
ENSCSAVG00000006333	-	66	49.565	ENSEASG00005017192	MRPS16	87	49.565	Equus_asinus_asinus
ENSCSAVG00000006333	-	66	49.565	ENSECAG00000009146	MRPS16	87	49.565	Equus_caballus
ENSCSAVG00000006333	-	70	46.094	ENSELUG00000011609	mrps16	94	46.094	Esox_lucius
ENSCSAVG00000006333	-	66	51.304	ENSFCAG00000037310	MRPS16	85	51.304	Felis_catus
ENSCSAVG00000006333	-	53	44.792	ENSFALG00000009917	MRPS16	84	44.828	Ficedula_albicollis
ENSCSAVG00000006333	-	60	51.887	ENSFDAG00000014014	MRPS16	94	46.512	Fukomys_damarensis
ENSCSAVG00000006333	-	67	50.847	ENSFHEG00000022624	mrps16	84	50.847	Fundulus_heteroclitus
ENSCSAVG00000006333	-	54	53.125	ENSGMOG00000001558	mrps16	74	53.125	Gadus_morhua
ENSCSAVG00000006333	-	57	48.000	ENSGALG00000050621	MRPS16	82	46.988	Gallus_gallus
ENSCSAVG00000006333	-	67	51.240	ENSGAFG00000012456	mrps16	87	51.240	Gambusia_affinis
ENSCSAVG00000006333	-	70	44.615	ENSGACG00000001715	mrps16	94	44.615	Gasterosteus_aculeatus
ENSCSAVG00000006333	-	64	50.450	ENSGAGG00000000097	-	76	50.450	Gopherus_agassizii
ENSCSAVG00000006333	-	56	38.144	ENSGAGG00000005030	-	74	38.144	Gopherus_agassizii
ENSCSAVG00000006333	-	72	47.200	ENSGGOG00000015055	MRPS16	91	47.200	Gorilla_gorilla
ENSCSAVG00000006333	-	67	50.847	ENSHBUG00000015492	mrps16	85	50.847	Haplochromis_burtoni
ENSCSAVG00000006333	-	67	47.414	ENSHGLG00000012797	MRPS16	86	47.414	Heterocephalus_glaber_female
ENSCSAVG00000006333	-	67	47.414	ENSHGLG00100007890	MRPS16	86	47.414	Heterocephalus_glaber_male
ENSCSAVG00000006333	-	52	54.945	ENSIPUG00000003397	mrps16	87	48.739	Ictalurus_punctatus
ENSCSAVG00000006333	-	67	48.276	ENSSTOG00000027184	MRPS16	86	48.276	Ictidomys_tridecemlineatus
ENSCSAVG00000006333	-	67	50.862	ENSJJAG00000023255	Mrps16	87	50.862	Jaculus_jaculus
ENSCSAVG00000006333	-	66	45.690	ENSKMAG00000009755	mrps16	83	45.690	Kryptolebias_marmoratus
ENSCSAVG00000006333	-	67	48.333	ENSLBEG00000024661	mrps16	87	48.333	Labrus_bergylta
ENSCSAVG00000006333	-	56	52.577	ENSLACG00000019160	MRPS16	90	46.341	Latimeria_chalumnae
ENSCSAVG00000006333	-	70	48.413	ENSLOCG00000003927	mrps16	92	48.413	Lepisosteus_oculatus
ENSCSAVG00000006333	-	67	45.690	ENSLAFG00000023124	MRPS16	89	45.690	Loxodonta_africana
ENSCSAVG00000006333	-	71	47.581	ENSMFAG00000032103	MRPS16	91	47.581	Macaca_fascicularis
ENSCSAVG00000006333	-	71	47.581	ENSMNEG00000041963	MRPS16	91	47.581	Macaca_nemestrina
ENSCSAVG00000006333	-	71	47.581	ENSMLEG00000044343	MRPS16	91	47.581	Mandrillus_leucophaeus
ENSCSAVG00000006333	-	67	49.153	ENSMAMG00000015181	mrps16	85	49.153	Mastacembelus_armatus
ENSCSAVG00000006333	-	57	46.535	ENSMGAG00000000893	MRPS16	78	48.598	Meleagris_gallopavo
ENSCSAVG00000006333	-	67	50.000	ENSMAUG00000010491	Mrps16	86	50.000	Mesocricetus_auratus
ENSCSAVG00000006333	-	67	47.414	ENSMICG00000042573	MRPS16	86	47.414	Microcebus_murinus
ENSCSAVG00000006333	-	72	47.200	ENSMOCG00000006927	Mrps16	93	47.200	Microtus_ochrogaster
ENSCSAVG00000006333	-	71	46.774	ENSMODG00000000168	MRPS16	94	46.774	Monodelphis_domestica
ENSCSAVG00000006333	-	67	44.915	ENSMALG00000007222	mrps16	82	44.915	Monopterus_albus
ENSCSAVG00000006333	-	67	51.724	MGP_CAROLIEiJ_G0018987	Mrps16	86	51.724	Mus_caroli
ENSCSAVG00000006333	-	67	51.724	ENSMUSG00000049960	Mrps16	86	51.724	Mus_musculus
ENSCSAVG00000006333	-	54	52.632	MGP_PahariEiJ_G0030001	Mrps16	93	48.800	Mus_pahari
ENSCSAVG00000006333	-	67	51.724	MGP_SPRETEiJ_G0019865	Mrps16	86	51.724	Mus_spretus
ENSCSAVG00000006333	-	71	48.387	ENSMPUG00000003777	MRPS16	80	48.387	Mustela_putorius_furo
ENSCSAVG00000006333	-	59	51.961	ENSMLUG00000022951	MRPS16	86	48.276	Myotis_lucifugus
ENSCSAVG00000006333	-	72	46.400	ENSNGAG00000019881	Mrps16	93	46.400	Nannospalax_galili
ENSCSAVG00000006333	-	67	48.305	ENSNBRG00000020914	mrps16	85	49.580	Neolamprologus_brichardi
ENSCSAVG00000006333	-	72	47.200	ENSNLEG00000016597	-	86	52.941	Nomascus_leucogenys
ENSCSAVG00000006333	-	72	45.600	ENSNLEG00000018904	-	91	45.600	Nomascus_leucogenys
ENSCSAVG00000006333	-	65	37.838	ENSNLEG00000029922	-	85	37.838	Nomascus_leucogenys
ENSCSAVG00000006333	-	62	52.294	ENSMEUG00000008644	MRPS16	89	52.294	Notamacropus_eugenii
ENSCSAVG00000006333	-	69	49.180	ENSOPRG00000018616	MRPS16	93	49.180	Ochotona_princeps
ENSCSAVG00000006333	-	56	51.546	ENSODEG00000019541	-	86	46.552	Octodon_degus
ENSCSAVG00000006333	-	67	50.847	ENSONIG00000014282	mrps16	85	50.847	Oreochromis_niloticus
ENSCSAVG00000006333	-	65	47.788	ENSOANG00000012378	MRPS16	82	47.788	Ornithorhynchus_anatinus
ENSCSAVG00000006333	-	63	51.351	ENSOCUG00000023231	-	93	47.200	Oryctolagus_cuniculus
ENSCSAVG00000006333	-	63	48.649	ENSOCUG00000024223	-	93	44.800	Oryctolagus_cuniculus
ENSCSAVG00000006333	-	58	50.980	ENSORLG00000022084	mrps16	84	45.763	Oryzias_latipes
ENSCSAVG00000006333	-	58	52.941	ENSORLG00020019793	mrps16	82	49.138	Oryzias_latipes_hni
ENSCSAVG00000006333	-	58	51.961	ENSORLG00015015664	mrps16	84	46.610	Oryzias_latipes_hsok
ENSCSAVG00000006333	-	66	49.138	ENSOMEG00000021490	mrps16	84	49.138	Oryzias_melastigma
ENSCSAVG00000006333	-	67	50.000	ENSOGAG00000033867	MRPS16	85	50.000	Otolemur_garnettii
ENSCSAVG00000006333	-	71	50.000	ENSOARG00000007548	MRPS16	80	50.000	Ovis_aries
ENSCSAVG00000006333	-	72	47.200	ENSPPAG00000009406	MRPS16	91	47.200	Pan_paniscus
ENSCSAVG00000006333	-	66	51.304	ENSPPRG00000024759	MRPS16	85	51.304	Panthera_pardus
ENSCSAVG00000006333	-	66	51.304	ENSPTIG00000021428	MRPS16	85	51.304	Panthera_tigris_altaica
ENSCSAVG00000006333	-	72	47.200	ENSPTRG00000002627	MRPS16	91	47.200	Pan_troglodytes
ENSCSAVG00000006333	-	56	42.708	ENSPTRG00000044912	-	88	42.708	Pan_troglodytes
ENSCSAVG00000006333	-	71	46.774	ENSPANG00000022374	MRPS16	91	46.774	Papio_anubis
ENSCSAVG00000006333	-	69	44.615	ENSPKIG00000013816	mrps16	94	44.615	Paramormyrops_kingsleyae
ENSCSAVG00000006333	-	58	50.000	ENSPSIG00000005589	MRPS16	70	50.000	Pelodiscus_sinensis
ENSCSAVG00000006333	-	65	50.000	ENSPMGG00000013450	mrps16	87	50.000	Periophthalmus_magnuspinnatus
ENSCSAVG00000006333	-	72	48.800	ENSPEMG00000021378	Mrps16	93	48.800	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006333	-	62	50.459	ENSPCIG00000015166	MRPS16	83	50.459	Phascolarctos_cinereus
ENSCSAVG00000006333	-	67	53.659	ENSPFOG00000014130	mrps16	87	53.659	Poecilia_formosa
ENSCSAVG00000006333	-	67	53.659	ENSPLAG00000018686	mrps16	87	53.659	Poecilia_latipinna
ENSCSAVG00000006333	-	67	53.659	ENSPMEG00000009648	mrps16	87	53.659	Poecilia_mexicana
ENSCSAVG00000006333	-	67	52.066	ENSPREG00000005800	mrps16	87	52.066	Poecilia_reticulata
ENSCSAVG00000006333	-	67	48.276	ENSPCOG00000009898	MRPS16	86	48.276	Propithecus_coquereli
ENSCSAVG00000006333	-	69	49.580	ENSPVAG00000012996	MRPS16	89	49.580	Pteropus_vampyrus
ENSCSAVG00000006333	-	67	50.847	ENSPNYG00000018439	mrps16	85	50.847	Pundamilia_nyererei
ENSCSAVG00000006333	-	65	48.673	ENSPNAG00000027291	mrps16	85	48.673	Pygocentrus_nattereri
ENSCSAVG00000006333	-	67	49.138	ENSRNOG00000006898	Mrps16	86	49.138	Rattus_norvegicus
ENSCSAVG00000006333	-	72	48.800	ENSRBIG00000037015	MRPS16	86	55.294	Rhinopithecus_bieti
ENSCSAVG00000006333	-	72	48.800	ENSRROG00000040939	MRPS16	86	55.294	Rhinopithecus_roxellana
ENSCSAVG00000006333	-	67	49.138	ENSSBOG00000016492	MRPS16	85	49.138	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006333	-	68	46.218	ENSSHAG00000003006	MRPS16	88	46.218	Sarcophilus_harrisii
ENSCSAVG00000006333	-	62	50.467	ENSSFOG00015007264	mrps16	83	48.246	Scleropages_formosus
ENSCSAVG00000006333	-	67	48.305	ENSSMAG00000014748	mrps16	87	48.305	Scophthalmus_maximus
ENSCSAVG00000006333	-	63	47.321	ENSSDUG00000015177	mrps16	80	47.321	Seriola_dumerili
ENSCSAVG00000006333	-	67	45.902	ENSSLDG00000004507	mrps16	87	45.902	Seriola_lalandi_dorsalis
ENSCSAVG00000006333	-	66	45.833	ENSSPUG00000012312	MRPS16	87	45.833	Sphenodon_punctatus
ENSCSAVG00000006333	-	59	51.852	ENSTNIG00000006736	mrps16	77	51.852	Tetraodon_nigroviridis
ENSCSAVG00000006333	-	59	51.852	ENSTNIG00000014796	MRPS16	77	51.852	Tetraodon_nigroviridis
ENSCSAVG00000006333	-	66	50.435	ENSTTRG00000000825	MRPS16	90	50.435	Tursiops_truncatus
ENSCSAVG00000006333	-	70	49.593	ENSUAMG00000005153	MRPS16	91	49.593	Ursus_americanus
ENSCSAVG00000006333	-	71	49.194	ENSUMAG00000009089	MRPS16	91	49.593	Ursus_maritimus
ENSCSAVG00000006333	-	71	48.387	ENSVPAG00000007263	MRPS16	97	48.387	Vicugna_pacos
ENSCSAVG00000006333	-	66	50.435	ENSVVUG00000022733	-	85	50.435	Vulpes_vulpes
ENSCSAVG00000006333	-	56	49.485	ENSXETG00000001399	mrps16	69	49.485	Xenopus_tropicalis
ENSCSAVG00000006333	-	67	54.237	ENSXCOG00000008280	mrps16	91	54.237	Xiphophorus_couchianus
ENSCSAVG00000006333	-	67	53.390	ENSXMAG00000000052	mrps16	86	53.390	Xiphophorus_maculatus