EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000006357 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
2808 bases
Position
chrreftig_26:907766-910573
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000010845GTP_EFTUPF00009.275.6e-5411
ENSCSAVP00000010846GTP_EFTUPF00009.275.6e-5411
ENSCSAVP00000010842GTP_EFTUPF00009.272e-5011
ENSCSAVP00000010843GTP_EFTUPF00009.279.6e-5011
ENSCSAVP00000010841GTP_EFTUPF00009.271.6e-4311
ENSCSAVP00000010844GTP_EFTUPF00009.273.3e-3611
ENSCSAVP00000010842MMR_HSR1PF01926.231.2e-0611
ENSCSAVP00000010843MMR_HSR1PF01926.231.9e-0611
ENSCSAVP00000010845GTP_EFTU_D2PF03144.257e-1311
ENSCSAVP00000010846GTP_EFTU_D2PF03144.257e-1311
ENSCSAVP00000010840GTP_EFTU_D3PF03143.174e-4311
ENSCSAVP00000010845GTP_EFTU_D3PF03143.172.6e-4211
ENSCSAVP00000010846GTP_EFTU_D3PF03143.172.7e-4211
ENSCSAVP00000010841GTP_EFTU_D3PF03143.174.6e-3811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000010975-953-ENSCSAVP00000010844175 (aa)-H2YZT2
ENSCSAVT00000010974-895-ENSCSAVP00000010843220 (aa)-H2YZT1
ENSCSAVT00000010977-1471-ENSCSAVP00000010846461 (aa)-H2YZT4
ENSCSAVT00000010976-1695-ENSCSAVP00000010845460 (aa)-H2YZT3
ENSCSAVT00000010971-1094-ENSCSAVP00000010840166 (aa)-H2YZS8
ENSCSAVT00000010973-671-ENSCSAVP00000010842191 (aa)-H2YZT0
ENSCSAVT00000010972-1289-ENSCSAVP00000010841265 (aa)-H2YZS9
Gene Model
Click here to download ENSCSAVG00000006357's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006357's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000006357-8958.904ENSCSAVG00000002297-7037.892
ENSCSAVG00000006357-9688.235ENSCSAVG00000009663-9980.911
ENSCSAVG00000006357-9533.941ENSCSAVG00000010206-8233.790
ENSCSAVG00000006357-9886.842ENSCSAVG00000001085-9175.054
ENSCSAVG00000006357-9690.260ENSCSAVG00000003196-9978.925
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000006357-6682.569ENSAPOG00000004775-9481.739Acanthochromis_polyacanthus
ENSCSAVG00000006357-9687.333ENSAPOG00000004714-9981.400Acanthochromis_polyacanthus
ENSCSAVG00000006357-7685.714ENSAPOG00000004685-5380.412Acanthochromis_polyacanthus
ENSCSAVG00000006357-8293.137ENSACIG00000001219-10083.816Amphilophus_citrinellus
ENSCSAVG00000006357-7894.118ENSAOCG00000022002-9982.885Amphiprion_ocellaris
ENSCSAVG00000006357-9892.000ENSAOCG00000022039-9983.370Amphiprion_ocellaris
ENSCSAVG00000006357-9892.000ENSAPEG00000016361-9983.589Amphiprion_percula
ENSCSAVG00000006357-9694.667ENSATEG00000003244-9684.683Anabas_testudineus
ENSCSAVG00000006357-10094.000ENSACLG00000022560-10084.848Astatotilapia_calliptera
ENSCSAVG00000006357-10092.667WBGene00001168eef-1A.110079.914Caenorhabditis_elegans
ENSCSAVG00000006357-10092.667WBGene00001169eef-1A.210079.914Caenorhabditis_elegans
ENSCSAVG00000006357-9997.297ENSCING00000021478-9992.511Ciona_intestinalis
ENSCSAVG00000006357-9692.000ENSCING00000018894-9983.478Ciona_intestinalis
ENSCSAVG00000006357-9586.885ENSCING00000005126-9979.393Ciona_intestinalis
ENSCSAVG00000006357-9890.667ENSCING00000007703-9978.112Ciona_intestinalis
ENSCSAVG00000006357-9693.333ENSCSEG00000008011-9984.061Cynoglossus_semilaevis
ENSCSAVG00000006357-8093.137ENSCSEG00000007992-9981.907Cynoglossus_semilaevis
ENSCSAVG00000006357-8293.137ENSCSEG00000007972-9981.707Cynoglossus_semilaevis
ENSCSAVG00000006357-9694.000ENSCVAG00000019356-9984.464Cyprinodon_variegatus
ENSCSAVG00000006357-9693.333FBgn0000557eEF1alpha29980.786Drosophila_melanogaster
ENSCSAVG00000006357-10093.333FBgn0284245eEF1alpha110080.562Drosophila_melanogaster
ENSCSAVG00000006357-9889.333ENSEBUG00000015814-9979.869Eptatretus_burgeri
ENSCSAVG00000006357-9894.000ENSFHEG00000015054-9984.716Fundulus_heteroclitus
ENSCSAVG00000006357-9694.000ENSGAFG00000014646-9984.683Gambusia_affinis
ENSCSAVG00000006357-9694.000ENSGACG00000002182-9984.683Gasterosteus_aculeatus
ENSCSAVG00000006357-9894.000ENSGACG00000002143-9984.868Gasterosteus_aculeatus
ENSCSAVG00000006357-9083.333ENSHBUG00000017166-9581.028Haplochromis_burtoni
ENSCSAVG00000006357-9692.667ENSHCOG00000008468-9984.026Hippocampus_comes
ENSCSAVG00000006357-9892.000ENSHCOG00000008489-9981.441Hippocampus_comes
ENSCSAVG00000006357-9694.667ENSLBEG00000002759-9983.589Labrus_bergylta
ENSCSAVG00000006357-9893.333ENSLBEG00000002955-9983.370Labrus_bergylta
ENSCSAVG00000006357-9694.000ENSMAMG00000007715-9984.683Mastacembelus_armatus
ENSCSAVG00000006357-9695.139ENSMMOG00000001165-9890.909Mola_mola
ENSCSAVG00000006357-9892.667ENSMMOG00000001106-9980.963Mola_mola
ENSCSAVG00000006357-9888.000ENSMMOG00000018160-9985.870Mola_mola
ENSCSAVG00000006357-7380.992ENSMALG00000012689-7380.714Monopterus_albus
ENSCSAVG00000006357-10075.108ENSNBRG00000017346-10075.108Neolamprologus_brichardi
ENSCSAVG00000006357-9091.813ENSONIG00000017760-9881.534Oreochromis_niloticus
ENSCSAVG00000006357-9694.000ENSORLG00000007614eef1a9983.807Oryzias_latipes
ENSCSAVG00000006357-9894.000ENSORLG00015002397-9985.153Oryzias_latipes_hsok
ENSCSAVG00000006357-9694.000ENSOMEG00000018226-9984.245Oryzias_melastigma
ENSCSAVG00000006357-9065.185ENSPMGG00000022427-9658.750Periophthalmus_magnuspinnatus
ENSCSAVG00000006357-9694.000ENSPMGG00000023911-9794.118Periophthalmus_magnuspinnatus
ENSCSAVG00000006357-9694.000ENSPFOG00000003924-9884.683Poecilia_formosa
ENSCSAVG00000006357-9694.000ENSPLAG00000004316-9984.683Poecilia_latipinna
ENSCSAVG00000006357-9694.000ENSPMEG00000001010-9984.683Poecilia_mexicana
ENSCSAVG00000006357-9894.000ENSPREG00000008243-9985.153Poecilia_reticulata
ENSCSAVG00000006357-10094.000ENSPNYG00000007263-10084.848Pundamilia_nyererei
ENSCSAVG00000006357-9490.000YBR118WTEF29979.431Saccharomyces_cerevisiae
ENSCSAVG00000006357-9490.000YPR080WTEF19979.431Saccharomyces_cerevisiae
ENSCSAVG00000006357-8484.173ENSSMAG00000016277-9783.152Scophthalmus_maximus
ENSCSAVG00000006357-9088.889ENSSMAG00000018469-9974.739Scophthalmus_maximus
ENSCSAVG00000006357-6659.459ENSSMAG00000018446-9959.459Scophthalmus_maximus
ENSCSAVG00000006357-9694.667ENSSDUG00000008198-9983.370Seriola_dumerili
ENSCSAVG00000006357-9693.333ENSSPAG00000001710-9982.276Stegastes_partitus
ENSCSAVG00000006357-10093.333ENSTRUG00000005066-9983.151Takifugu_rubripes
ENSCSAVG00000006357-9694.000ENSTRUG00000005727ef-1a9984.683Takifugu_rubripes
ENSCSAVG00000006357-9594.000ENSTNIG00000002617-9481.514Tetraodon_nigroviridis
ENSCSAVG00000006357-9694.000ENSTNIG00000002619-9984.683Tetraodon_nigroviridis
ENSCSAVG00000006357-9694.964ENSXCOG00000001542-9794.118Xiphophorus_couchianus

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