EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000006409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4563 bases
Position: chrreftig_17:870213-874775
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000010938	GTP_EFTU	PF00009.27	1.5e-06	1	1
ENSCSAVP00000010938	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011069	-	1137	-	ENSCSAVP00000010938	267 (aa)	-	H2Z026

Gene Model

Click here to download ENSCSAVG00000006409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000006409	-	64	31.977	ENSCSAVG00000000160	-	78	31.977
ENSCSAVG00000006409	-	59	30.380	ENSCSAVG00000002088	-	72	30.380
ENSCSAVG00000006409	-	62	33.533	ENSCSAVG00000011162	-	81	33.533
ENSCSAVG00000006409	-	61	32.317	ENSCSAVG00000001356	-	66	32.317
ENSCSAVG00000006409	-	61	32.121	ENSCSAVG00000005689	-	78	32.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006409	-	99	65.543	ENSG00000115137	DNAJC27	96	70.930	Homo_sapiens
ENSCSAVG00000006409	-	99	65.152	ENSAPOG00000020278	dnajc27	97	65.152	Acanthochromis_polyacanthus
ENSCSAVG00000006409	-	99	64.552	ENSAMEG00000002554	DNAJC27	98	64.552	Ailuropoda_melanoleuca
ENSCSAVG00000006409	-	99	65.038	ENSACIG00000009139	dnajc27	97	65.038	Amphilophus_citrinellus
ENSCSAVG00000006409	-	99	65.152	ENSAOCG00000006604	dnajc27	97	65.152	Amphiprion_ocellaris
ENSCSAVG00000006409	-	99	65.152	ENSAPEG00000009586	dnajc27	97	65.152	Amphiprion_percula
ENSCSAVG00000006409	-	99	66.038	ENSATEG00000008796	dnajc27	97	66.038	Anabas_testudineus
ENSCSAVG00000006409	-	99	63.258	ENSACAG00000010248	DNAJC27	98	63.258	Anolis_carolinensis
ENSCSAVG00000006409	-	99	65.169	ENSANAG00000032274	DNAJC27	97	68.023	Aotus_nancymaae
ENSCSAVG00000006409	-	99	66.038	ENSACLG00000004019	dnajc27	97	66.038	Astatotilapia_calliptera
ENSCSAVG00000006409	-	99	64.045	ENSAMXG00000041488	dnajc27	97	64.045	Astyanax_mexicanus
ENSCSAVG00000006409	-	99	64.045	ENSBTAG00000018239	DNAJC27	98	64.045	Bos_taurus
ENSCSAVG00000006409	-	99	65.169	ENSCJAG00000008094	DNAJC27	97	68.023	Callithrix_jacchus
ENSCSAVG00000006409	-	99	64.925	ENSCAFG00000004098	DNAJC27	98	64.925	Canis_familiaris
ENSCSAVG00000006409	-	99	64.794	ENSCAFG00020025277	DNAJC27	98	64.794	Canis_lupus_dingo
ENSCSAVG00000006409	-	99	64.045	ENSCHIG00000013821	DNAJC27	98	64.045	Capra_hircus
ENSCSAVG00000006409	-	99	65.543	ENSTSYG00000014096	DNAJC27	97	68.605	Carlito_syrichta
ENSCSAVG00000006409	-	99	65.169	ENSCPOG00000006843	DNAJC27	98	65.169	Cavia_porcellus
ENSCSAVG00000006409	-	99	64.794	ENSCCAG00000021410	DNAJC27	97	67.442	Cebus_capucinus
ENSCSAVG00000006409	-	99	65.543	ENSCATG00000029231	DNAJC27	97	68.605	Cercocebus_atys
ENSCSAVG00000006409	-	99	64.552	ENSCLAG00000008212	DNAJC27	98	64.552	Chinchilla_lanigera
ENSCSAVG00000006409	-	99	65.543	ENSCSAG00000008536	DNAJC27	98	65.543	Chlorocebus_sabaeus
ENSCSAVG00000006409	-	99	64.045	ENSCPBG00000022284	DNAJC27	98	64.045	Chrysemys_picta_bellii
ENSCSAVG00000006409	-	100	90.637	ENSCING00000000917	rbj	100	90.637	Ciona_intestinalis
ENSCSAVG00000006409	-	99	65.543	ENSCANG00000029144	-	97	69.186	Colobus_angolensis_palliatus
ENSCSAVG00000006409	-	99	65.152	ENSCGRG00001023794	Dnajc27	97	65.152	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006409	-	99	65.152	ENSCGRG00000007127	Dnajc27	97	65.152	Cricetulus_griseus_crigri
ENSCSAVG00000006409	-	99	66.038	ENSCSEG00000014284	dnajc27	97	66.038	Cynoglossus_semilaevis
ENSCSAVG00000006409	-	99	64.794	ENSDARG00000070916	dnajc27	98	64.794	Danio_rerio
ENSCSAVG00000006409	-	99	64.925	ENSDNOG00000040043	DNAJC27	98	64.925	Dasypus_novemcinctus
ENSCSAVG00000006409	-	99	65.152	ENSDORG00000015134	Dnajc27	97	65.152	Dipodomys_ordii
ENSCSAVG00000006409	-	99	64.045	ENSEASG00005010598	DNAJC27	98	64.045	Equus_asinus_asinus
ENSCSAVG00000006409	-	99	64.419	ENSECAG00000024595	DNAJC27	98	64.419	Equus_caballus
ENSCSAVG00000006409	-	99	63.296	ENSELUG00000019264	dnajc27	98	63.296	Esox_lucius
ENSCSAVG00000006409	-	99	64.794	ENSFCAG00000038919	DNAJC27	97	68.023	Felis_catus
ENSCSAVG00000006409	-	99	56.015	ENSFALG00000012658	DNAJC27	97	56.015	Ficedula_albicollis
ENSCSAVG00000006409	-	99	65.152	ENSGALG00000028967	DNAJC27	97	65.152	Gallus_gallus
ENSCSAVG00000006409	-	99	66.038	ENSGACG00000015457	dnajc27	97	66.038	Gasterosteus_aculeatus
ENSCSAVG00000006409	-	99	65.169	ENSGGOG00000004081	DNAJC27	97	68.023	Gorilla_gorilla
ENSCSAVG00000006409	-	99	66.038	ENSHBUG00000001491	dnajc27	97	66.038	Haplochromis_burtoni
ENSCSAVG00000006409	-	99	64.794	ENSHGLG00000013756	DNAJC27	98	64.794	Heterocephalus_glaber_female
ENSCSAVG00000006409	-	99	64.794	ENSHGLG00100009434	DNAJC27	98	64.794	Heterocephalus_glaber_male
ENSCSAVG00000006409	-	99	66.038	ENSHCOG00000002948	dnajc27	97	66.038	Hippocampus_comes
ENSCSAVG00000006409	-	99	63.670	ENSIPUG00000015086	dnajc27	98	63.670	Ictalurus_punctatus
ENSCSAVG00000006409	-	99	65.169	ENSSTOG00000006080	DNAJC27	98	65.169	Ictidomys_tridecemlineatus
ENSCSAVG00000006409	-	99	65.530	ENSJJAG00000016683	Dnajc27	97	65.530	Jaculus_jaculus
ENSCSAVG00000006409	-	99	66.038	ENSKMAG00000011954	dnajc27	97	66.038	Kryptolebias_marmoratus
ENSCSAVG00000006409	-	93	53.640	ENSLBEG00000018738	-	93	54.054	Labrus_bergylta
ENSCSAVG00000006409	-	99	64.773	ENSLBEG00000028391	dnajc27	97	64.773	Labrus_bergylta
ENSCSAVG00000006409	-	99	63.433	ENSLACG00000012994	DNAJC27	98	63.433	Latimeria_chalumnae
ENSCSAVG00000006409	-	99	61.798	ENSLOCG00000016679	dnajc27	98	61.798	Lepisosteus_oculatus
ENSCSAVG00000006409	-	99	66.292	ENSLAFG00000002742	DNAJC27	98	66.292	Loxodonta_africana
ENSCSAVG00000006409	-	99	65.543	ENSMFAG00000043229	DNAJC27	97	68.605	Macaca_fascicularis
ENSCSAVG00000006409	-	99	65.543	ENSMMUG00000009603	DNAJC27	97	68.605	Macaca_mulatta
ENSCSAVG00000006409	-	99	66.038	ENSMAMG00000022707	dnajc27	97	66.038	Mastacembelus_armatus
ENSCSAVG00000006409	-	99	66.038	ENSMZEG00005012058	dnajc27	97	66.038	Maylandia_zebra
ENSCSAVG00000006409	-	99	65.530	ENSMAUG00000000099	Dnajc27	97	65.530	Mesocricetus_auratus
ENSCSAVG00000006409	-	99	65.169	ENSMICG00000027424	DNAJC27	97	69.186	Microcebus_murinus
ENSCSAVG00000006409	-	99	64.773	ENSMOCG00000015357	Dnajc27	96	64.773	Microtus_ochrogaster
ENSCSAVG00000006409	-	99	64.794	ENSMODG00000015869	DNAJC27	98	64.794	Monodelphis_domestica
ENSCSAVG00000006409	-	99	66.038	ENSMALG00000001189	dnajc27	97	66.038	Monopterus_albus
ENSCSAVG00000006409	-	99	65.909	MGP_CAROLIEiJ_G0017579	Dnajc27	97	65.909	Mus_caroli
ENSCSAVG00000006409	-	99	65.909	ENSMUSG00000020657	Dnajc27	97	65.909	Mus_musculus
ENSCSAVG00000006409	-	64	68.605	MGP_PahariEiJ_G0029339	-	79	68.605	Mus_pahari
ENSCSAVG00000006409	-	99	65.909	MGP_SPRETEiJ_G0018423	Dnajc27	97	65.909	Mus_spretus
ENSCSAVG00000006409	-	99	64.419	ENSMPUG00000014032	DNAJC27	98	64.419	Mustela_putorius_furo
ENSCSAVG00000006409	-	99	64.394	ENSMLUG00000014143	DNAJC27	97	64.394	Myotis_lucifugus
ENSCSAVG00000006409	-	99	66.038	ENSNBRG00000022552	dnajc27	97	66.038	Neolamprologus_brichardi
ENSCSAVG00000006409	-	99	65.543	ENSNLEG00000001103	DNAJC27	97	68.605	Nomascus_leucogenys
ENSCSAVG00000006409	-	99	64.773	ENSOPRG00000008650	DNAJC27	97	64.773	Ochotona_princeps
ENSCSAVG00000006409	-	99	64.394	ENSODEG00000007488	DNAJC27	97	64.394	Octodon_degus
ENSCSAVG00000006409	-	95	65.625	ENSONIG00000009008	dnajc27	95	65.625	Oreochromis_niloticus
ENSCSAVG00000006409	-	99	65.152	ENSOCUG00000011260	DNAJC27	97	65.152	Oryctolagus_cuniculus
ENSCSAVG00000006409	-	99	65.660	ENSORLG00000001134	dnajc27	97	65.660	Oryzias_latipes
ENSCSAVG00000006409	-	99	65.660	ENSORLG00020006790	dnajc27	97	65.660	Oryzias_latipes_hni
ENSCSAVG00000006409	-	99	65.660	ENSORLG00015010005	dnajc27	97	65.660	Oryzias_latipes_hsok
ENSCSAVG00000006409	-	99	65.660	ENSOMEG00000017890	dnajc27	97	65.660	Oryzias_melastigma
ENSCSAVG00000006409	-	99	65.169	ENSOGAG00000015168	DNAJC27	98	65.169	Otolemur_garnettii
ENSCSAVG00000006409	-	99	64.179	ENSOARG00000018127	DNAJC27	98	64.179	Ovis_aries
ENSCSAVG00000006409	-	99	65.543	ENSPPAG00000031678	DNAJC27	97	68.605	Pan_paniscus
ENSCSAVG00000006409	-	99	64.794	ENSPPRG00000022920	DNAJC27	97	68.023	Panthera_pardus
ENSCSAVG00000006409	-	99	64.794	ENSPTIG00000013443	DNAJC27	97	68.023	Panthera_tigris_altaica
ENSCSAVG00000006409	-	99	65.543	ENSPTRG00000011719	DNAJC27	97	68.605	Pan_troglodytes
ENSCSAVG00000006409	-	99	65.543	ENSPANG00000023972	DNAJC27	97	68.605	Papio_anubis
ENSCSAVG00000006409	-	65	64.368	ENSPKIG00000005039	dnajc27	95	64.368	Paramormyrops_kingsleyae
ENSCSAVG00000006409	-	99	61.798	ENSPKIG00000005931	DNAJC27	98	61.798	Paramormyrops_kingsleyae
ENSCSAVG00000006409	-	99	63.670	ENSPSIG00000009930	DNAJC27	98	63.670	Pelodiscus_sinensis
ENSCSAVG00000006409	-	99	65.056	ENSPMAG00000005573	dnajc27	96	65.056	Petromyzon_marinus
ENSCSAVG00000006409	-	99	65.918	ENSPCIG00000025239	DNAJC27	98	65.918	Phascolarctos_cinereus
ENSCSAVG00000006409	-	99	66.038	ENSPFOG00000006335	dnajc27	97	66.038	Poecilia_formosa
ENSCSAVG00000006409	-	99	65.660	ENSPLAG00000008845	dnajc27	97	65.660	Poecilia_latipinna
ENSCSAVG00000006409	-	99	66.038	ENSPMEG00000018256	dnajc27	97	66.038	Poecilia_mexicana
ENSCSAVG00000006409	-	64	67.052	ENSPREG00000010228	dnajc27	89	67.052	Poecilia_reticulata
ENSCSAVG00000006409	-	99	65.543	ENSPPYG00000012594	DNAJC27	98	65.543	Pongo_abelii
ENSCSAVG00000006409	-	99	65.543	ENSPCOG00000025665	DNAJC27	97	69.186	Propithecus_coquereli
ENSCSAVG00000006409	-	99	65.543	ENSPVAG00000017520	DNAJC27	98	65.543	Pteropus_vampyrus
ENSCSAVG00000006409	-	99	66.038	ENSPNYG00000023681	dnajc27	97	66.038	Pundamilia_nyererei
ENSCSAVG00000006409	-	99	64.045	ENSPNAG00000025619	dnajc27	98	64.045	Pygocentrus_nattereri
ENSCSAVG00000006409	-	99	64.773	ENSRNOG00000003988	Dnajc27	97	64.773	Rattus_norvegicus
ENSCSAVG00000006409	-	99	65.543	ENSRBIG00000041935	-	97	69.186	Rhinopithecus_bieti
ENSCSAVG00000006409	-	99	65.543	ENSRROG00000031027	-	97	69.186	Rhinopithecus_roxellana
ENSCSAVG00000006409	-	99	62.172	ENSSFOG00015020074	DNAJC27	98	62.172	Scleropages_formosus
ENSCSAVG00000006409	-	99	62.264	ENSSFOG00015017512	dnajc27	97	62.264	Scleropages_formosus
ENSCSAVG00000006409	-	99	65.152	ENSSMAG00000000032	dnajc27	97	65.152	Scophthalmus_maximus
ENSCSAVG00000006409	-	99	66.038	ENSSDUG00000003036	dnajc27	97	66.038	Seriola_dumerili
ENSCSAVG00000006409	-	99	66.038	ENSSLDG00000015143	dnajc27	97	66.038	Seriola_lalandi_dorsalis
ENSCSAVG00000006409	-	99	65.152	ENSSPAG00000009154	dnajc27	97	65.152	Stegastes_partitus
ENSCSAVG00000006409	-	99	64.015	ENSSSCG00000008577	DNAJC27	95	68.639	Sus_scrofa
ENSCSAVG00000006409	-	99	65.152	ENSTRUG00000023427	dnajc27	97	65.152	Takifugu_rubripes
ENSCSAVG00000006409	-	99	64.773	ENSTNIG00000006596	dnajc27	97	64.773	Tetraodon_nigroviridis
ENSCSAVG00000006409	-	99	65.169	ENSTBEG00000005463	DNAJC27	98	65.169	Tupaia_belangeri
ENSCSAVG00000006409	-	99	64.773	ENSTTRG00000015163	DNAJC27	97	64.773	Tursiops_truncatus
ENSCSAVG00000006409	-	99	64.794	ENSUAMG00000009585	DNAJC27	98	64.794	Ursus_americanus
ENSCSAVG00000006409	-	99	64.794	ENSUMAG00000022558	DNAJC27	98	64.794	Ursus_maritimus
ENSCSAVG00000006409	-	99	59.023	ENSVPAG00000006953	DNAJC27	98	59.023	Vicugna_pacos
ENSCSAVG00000006409	-	99	64.419	ENSVVUG00000015241	DNAJC27	98	64.419	Vulpes_vulpes
ENSCSAVG00000006409	-	99	65.660	ENSXCOG00000010812	dnajc27	97	65.660	Xiphophorus_couchianus
ENSCSAVG00000006409	-	99	65.660	ENSXMAG00000003407	dnajc27	97	65.660	Xiphophorus_maculatus