EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000006512 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
15631 bases
Position
chrreftig_86:364986-380616
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000011137MMR_HSR1PF01926.236.1e-2011
ENSCSAVP00000011138MMR_HSR1PF01926.231.1e-1911
ENSCSAVP00000011136MMR_HSR1PF01926.231.7e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000011266-1386-ENSCSAVP00000011135277 (aa)-H2Z0M3
ENSCSAVT00000011267-1348-ENSCSAVP00000011136397 (aa)-H2Z0M4
ENSCSAVT00000011268-1041-ENSCSAVP00000011137343 (aa)-H2Z0M5
ENSCSAVT00000011269-1032-ENSCSAVP00000011138344 (aa)-H2Z0M6
Gene Model
Click here to download ENSCSAVG00000006512's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006512's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000006512-10070.677ENSG00000138430OLA110080.172Homo_sapiens
ENSCSAVG00000006512-9969.018ENSAPOG00000015861OLA19969.018Acanthochromis_polyacanthus
ENSCSAVG00000006512-10071.679ENSAPOG00000023705ola19971.679Acanthochromis_polyacanthus
ENSCSAVG00000006512-6169.547ENSAMEG00000012204OLA19269.547Ailuropoda_melanoleuca
ENSCSAVG00000006512-10061.153ENSACIG00000016766ola19961.153Amphilophus_citrinellus
ENSCSAVG00000006512-9571.164ENSACIG00000000692OLA19971.164Amphilophus_citrinellus
ENSCSAVG00000006512-10072.180ENSAOCG00000019135ola19972.180Amphiprion_ocellaris
ENSCSAVG00000006512-10069.576ENSAOCG00000012625OLA19969.576Amphiprion_ocellaris
ENSCSAVG00000006512-10069.327ENSAPEG00000022047OLA19969.327Amphiprion_percula
ENSCSAVG00000006512-10072.180ENSAPEG00000014283ola19972.180Amphiprion_percula
ENSCSAVG00000006512-10071.930ENSATEG00000009394ola19971.930Anabas_testudineus
ENSCSAVG00000006512-9571.164ENSATEG00000015763OLA19971.164Anabas_testudineus
ENSCSAVG00000006512-9169.863ENSAPLG00000008147OLA19969.863Anas_platyrhynchos
ENSCSAVG00000006512-10069.925ENSACAG00000017018OLA19969.925Anolis_carolinensis
ENSCSAVG00000006512-10070.426ENSANAG00000029072-9570.426Aotus_nancymaae
ENSCSAVG00000006512-9651.823ENSANAG00000023787-9949.219Aotus_nancymaae
ENSCSAVG00000006512-10069.173ENSACLG00000009505OLA19969.173Astatotilapia_calliptera
ENSCSAVG00000006512-10070.927ENSACLG00000011067ola19970.927Astatotilapia_calliptera
ENSCSAVG00000006512-10069.925ENSAMXG00000004913ola19969.925Astyanax_mexicanus
ENSCSAVG00000006512-10070.677ENSBTAG00000006970OLA19480.000Bos_taurus
ENSCSAVG00000006512-9866.837WBGene00012344ola-19866.837Caenorhabditis_elegans
ENSCSAVG00000006512-10070.677ENSCJAG00000007877OLA19570.677Callithrix_jacchus
ENSCSAVG00000006512-6864.815ENSCJAG00000046788-8264.815Callithrix_jacchus
ENSCSAVG00000006512-10070.426ENSCAFG00000013178OLA19970.426Canis_familiaris
ENSCSAVG00000006512-10070.677ENSCHIG00000024019OLA19870.677Capra_hircus
ENSCSAVG00000006512-10070.677ENSTSYG00000005517-9970.677Carlito_syrichta
ENSCSAVG00000006512-10070.677ENSCPOG00000031110OLA19970.677Cavia_porcellus
ENSCSAVG00000006512-6266.935ENSCCAG00000030871-9475.806Cebus_capucinus
ENSCSAVG00000006512-10070.677ENSCCAG00000017844-9970.677Cebus_capucinus
ENSCSAVG00000006512-9966.162ENSCCAG00000022561-9966.162Cebus_capucinus
ENSCSAVG00000006512-10070.677ENSCATG00000038920-9570.677Cercocebus_atys
ENSCSAVG00000006512-10070.677ENSCATG00000040710-9670.677Cercocebus_atys
ENSCSAVG00000006512-10070.677ENSCLAG00000008657OLA19970.677Chinchilla_lanigera
ENSCSAVG00000006512-6169.547ENSCSAG00000014670OLA19269.547Chlorocebus_sabaeus
ENSCSAVG00000006512-8982.222ENSCHOG00000005044OLA18482.222Choloepus_hoffmanni
ENSCSAVG00000006512-10069.000ENSCPBG00000003917OLA19969.000Chrysemys_picta_bellii
ENSCSAVG00000006512-9788.571ENSCING00000006759-9988.442Ciona_intestinalis
ENSCSAVG00000006512-9170.411ENSCANG00000039286-9570.411Colobus_angolensis_palliatus
ENSCSAVG00000006512-10052.754ENSCANG00000029540-8754.252Colobus_angolensis_palliatus
ENSCSAVG00000006512-10070.677ENSCGRG00001001469Ola19970.677Cricetulus_griseus_chok1gshd
ENSCSAVG00000006512-10070.677ENSCGRG00000017472Ola19970.677Cricetulus_griseus_crigri
ENSCSAVG00000006512-9769.330ENSCSEG00000005504OLA17665.684Cynoglossus_semilaevis
ENSCSAVG00000006512-10070.677ENSCSEG00000005434ola19970.677Cynoglossus_semilaevis
ENSCSAVG00000006512-10069.424ENSCVAG00000018673OLA19969.424Cyprinodon_variegatus
ENSCSAVG00000006512-10070.677ENSCVAG00000003966ola19970.677Cyprinodon_variegatus
ENSCSAVG00000006512-10069.424ENSDARG00000044565ola19870.445Danio_rerio
ENSCSAVG00000006512-10070.426ENSDNOG00000010630OLA19970.426Dasypus_novemcinctus
ENSCSAVG00000006512-9960.325ENSDORG00000024064-9960.325Dipodomys_ordii
ENSCSAVG00000006512-10070.677ENSDORG00000008681-9970.677Dipodomys_ordii
ENSCSAVG00000006512-9869.133FBgn0030151CG13549769.133Drosophila_melanogaster
ENSCSAVG00000006512-7292.308ENSETEG00000012453OLA16990.625Echinops_telfairi
ENSCSAVG00000006512-10070.677ENSEBUG00000006035ola19970.677Eptatretus_burgeri
ENSCSAVG00000006512-9766.237ENSEASG00005022603OLA19166.237Equus_asinus_asinus
ENSCSAVG00000006512-10070.677ENSECAG00000016353OLA19970.677Equus_caballus
ENSCSAVG00000006512-9273.387ENSEEUG00000015203OLA19962.192Erinaceus_europaeus
ENSCSAVG00000006512-9959.012ENSELUG00000010548ola19959.012Esox_lucius
ENSCSAVG00000006512-9267.120ENSELUG00000022548OLA18967.120Esox_lucius
ENSCSAVG00000006512-10070.677ENSFCAG00000036661-9970.677Felis_catus
ENSCSAVG00000006512-9263.415ENSFCAG00000022771-8063.415Felis_catus
ENSCSAVG00000006512-10069.424ENSFALG00000002944OLA19969.424Ficedula_albicollis
ENSCSAVG00000006512-10070.927ENSFDAG00000011277OLA19970.927Fukomys_damarensis
ENSCSAVG00000006512-10069.327ENSFHEG00000000700OLA19969.327Fundulus_heteroclitus
ENSCSAVG00000006512-10070.677ENSFHEG00000009030ola19970.677Fundulus_heteroclitus
ENSCSAVG00000006512-9967.085ENSGMOG00000000608ola19967.085Gadus_morhua
ENSCSAVG00000006512-10069.424ENSGALG00000009325OLA19969.424Gallus_gallus
ENSCSAVG00000006512-10058.145ENSGAFG00000003776OLA19958.145Gambusia_affinis
ENSCSAVG00000006512-10070.927ENSGAFG00000019733ola19970.927Gambusia_affinis
ENSCSAVG00000006512-10069.424ENSGACG00000010083ola19969.424Gasterosteus_aculeatus
ENSCSAVG00000006512-10070.426ENSGGOG00000022215OLA19970.426Gorilla_gorilla
ENSCSAVG00000006512-10070.677ENSHBUG00000006078ola19970.677Haplochromis_burtoni
ENSCSAVG00000006512-10069.077ENSHBUG00000019432OLA19969.077Haplochromis_burtoni
ENSCSAVG00000006512-10062.376ENSHGLG00000012199-9962.376Heterocephalus_glaber_female
ENSCSAVG00000006512-10052.618ENSHGLG00000007643-9952.618Heterocephalus_glaber_female
ENSCSAVG00000006512-10059.649ENSHGLG00000003777-9959.649Heterocephalus_glaber_female
ENSCSAVG00000006512-10070.677ENSHGLG00000006618-9970.677Heterocephalus_glaber_female
ENSCSAVG00000006512-10052.618ENSHGLG00100008457-9952.618Heterocephalus_glaber_male
ENSCSAVG00000006512-10062.376ENSHGLG00100009225-9962.376Heterocephalus_glaber_male
ENSCSAVG00000006512-10069.925ENSHCOG00000020085ola19969.925Hippocampus_comes
ENSCSAVG00000006512-10069.424ENSIPUG00000019139ola19969.424Ictalurus_punctatus
ENSCSAVG00000006512-10070.677ENSSTOG00000015547OLA19970.677Ictidomys_tridecemlineatus
ENSCSAVG00000006512-10070.677ENSJJAG00000022958-9970.677Jaculus_jaculus
ENSCSAVG00000006512-9957.468ENSJJAG00000018538-9957.468Jaculus_jaculus
ENSCSAVG00000006512-10067.830ENSKMAG00000015578OLA19967.830Kryptolebias_marmoratus
ENSCSAVG00000006512-10070.927ENSKMAG00000012576ola19970.927Kryptolebias_marmoratus
ENSCSAVG00000006512-10068.579ENSLBEG00000016137OLA19968.593Labrus_bergylta
ENSCSAVG00000006512-10069.674ENSLBEG00000018929ola19969.674Labrus_bergylta
ENSCSAVG00000006512-10072.180ENSLACG00000007258OLA19972.180Latimeria_chalumnae
ENSCSAVG00000006512-10071.930ENSLOCG00000007399ola19971.930Lepisosteus_oculatus
ENSCSAVG00000006512-10070.927ENSLAFG00000002706OLA19179.200Loxodonta_africana
ENSCSAVG00000006512-10070.677ENSMFAG00000044124OLA19970.677Macaca_fascicularis
ENSCSAVG00000006512-10070.677ENSMMUG00000007092OLA19570.677Macaca_mulatta
ENSCSAVG00000006512-10070.677ENSMNEG00000040767OLA19970.677Macaca_nemestrina
ENSCSAVG00000006512-10070.677ENSMLEG00000040175OLA19570.677Mandrillus_leucophaeus
ENSCSAVG00000006512-10060.902ENSMAMG00000003717ola19960.902Mastacembelus_armatus
ENSCSAVG00000006512-10070.324ENSMAMG00000005934OLA19970.324Mastacembelus_armatus
ENSCSAVG00000006512-10070.927ENSMZEG00005001203ola19970.927Maylandia_zebra
ENSCSAVG00000006512-10069.077ENSMZEG00005005008OLA19969.077Maylandia_zebra
ENSCSAVG00000006512-9663.660ENSMGAG00000009826OLA19967.598Meleagris_gallopavo
ENSCSAVG00000006512-10070.677ENSMAUG00000019168Ola19970.677Mesocricetus_auratus
ENSCSAVG00000006512-10070.677ENSMICG00000000354OLA19970.677Microcebus_murinus
ENSCSAVG00000006512-10064.160ENSMOCG00000011603-9964.160Microtus_ochrogaster
ENSCSAVG00000006512-10070.677ENSMOCG00000003125-9970.677Microtus_ochrogaster
ENSCSAVG00000006512-10059.900ENSMMOG00000008941ola19959.900Mola_mola
ENSCSAVG00000006512-10058.897ENSMMOG00000001661OLA19958.897Mola_mola
ENSCSAVG00000006512-10067.920ENSMODG00000009296OLA19967.920Monodelphis_domestica
ENSCSAVG00000006512-9769.588ENSMALG00000009196OLA19659.021Monopterus_albus
ENSCSAVG00000006512-10071.429ENSMALG00000017692ola19271.429Monopterus_albus
ENSCSAVG00000006512-10070.677MGP_CAROLIEiJ_G0023655Ola19970.677Mus_caroli
ENSCSAVG00000006512-10070.677ENSMUSG00000027108Ola19970.677Mus_musculus
ENSCSAVG00000006512-10070.677MGP_PahariEiJ_G0025107Ola19970.677Mus_pahari
ENSCSAVG00000006512-10070.677MGP_SPRETEiJ_G0024578Ola19970.677Mus_spretus
ENSCSAVG00000006512-10070.677ENSMPUG00000013906OLA19970.677Mustela_putorius_furo
ENSCSAVG00000006512-10070.677ENSNGAG00000017639Ola19970.677Nannospalax_galili
ENSCSAVG00000006512-9950.754ENSNGAG00000017257-9750.754Nannospalax_galili
ENSCSAVG00000006512-10060.401ENSNBRG00000022738ola19960.401Neolamprologus_brichardi
ENSCSAVG00000006512-9570.185ENSNBRG00000011698OLA19970.185Neolamprologus_brichardi
ENSCSAVG00000006512-10067.168ENSNLEG00000015824-9967.168Nomascus_leucogenys
ENSCSAVG00000006512-10070.426ENSNLEG00000005817OLA19570.426Nomascus_leucogenys
ENSCSAVG00000006512-10058.647ENSMEUG00000009973OLA19958.647Notamacropus_eugenii
ENSCSAVG00000006512-8866.129ENSOPRG00000005569OLA18371.585Ochotona_princeps
ENSCSAVG00000006512-10070.677ENSODEG00000009011OLA19970.677Octodon_degus
ENSCSAVG00000006512-10069.327ENSONIG00000008658OLA19969.327Oreochromis_niloticus
ENSCSAVG00000006512-10070.927ENSONIG00000001265ola19970.927Oreochromis_niloticus
ENSCSAVG00000006512-10071.178ENSOANG00000008601OLA19971.178Ornithorhynchus_anatinus
ENSCSAVG00000006512-10070.677ENSOCUG00000003574OLA19970.677Oryctolagus_cuniculus
ENSCSAVG00000006512-9770.876ENSORLG00000017489OLA19770.876Oryzias_latipes
ENSCSAVG00000006512-10060.902ENSORLG00000013788ola19960.902Oryzias_latipes
ENSCSAVG00000006512-10070.426ENSORLG00020021173OLA19970.426Oryzias_latipes_hni
ENSCSAVG00000006512-10060.902ENSORLG00020015238ola19960.902Oryzias_latipes_hni
ENSCSAVG00000006512-10070.000ENSORLG00015015230OLA19970.000Oryzias_latipes_hsok
ENSCSAVG00000006512-9269.482ENSORLG00015013782ola19469.482Oryzias_latipes_hsok
ENSCSAVG00000006512-10070.250ENSOMEG00000004469OLA19970.250Oryzias_melastigma
ENSCSAVG00000006512-10071.178ENSOMEG00000012796ola19971.178Oryzias_melastigma
ENSCSAVG00000006512-10070.677ENSOGAG00000016557OLA19970.677Otolemur_garnettii
ENSCSAVG00000006512-10070.677ENSOARG00000000451-9570.677Ovis_aries
ENSCSAVG00000006512-7167.368ENSOARG00000000967-9867.368Ovis_aries
ENSCSAVG00000006512-10070.927ENSPPAG00000035004OLA19970.927Pan_paniscus
ENSCSAVG00000006512-9663.351ENSPPAG00000037463-9963.351Pan_paniscus
ENSCSAVG00000006512-10070.677ENSPPRG00000004233-9970.677Panthera_pardus
ENSCSAVG00000006512-9966.332ENSPPRG00000003845-9766.332Panthera_pardus
ENSCSAVG00000006512-10066.667ENSPTIG00000021823-9766.667Panthera_tigris_altaica
ENSCSAVG00000006512-10070.677ENSPTIG00000011872-9970.677Panthera_tigris_altaica
ENSCSAVG00000006512-9663.089ENSPTRG00000048207-9963.089Pan_troglodytes
ENSCSAVG00000006512-10070.677ENSPTRG00000012650OLA19970.677Pan_troglodytes
ENSCSAVG00000006512-10070.677ENSPANG00000020854OLA19570.677Papio_anubis
ENSCSAVG00000006512-10070.175ENSPKIG00000004546OLA19970.175Paramormyrops_kingsleyae
ENSCSAVG00000006512-10068.672ENSPSIG00000017495OLA19968.672Pelodiscus_sinensis
ENSCSAVG00000006512-9670.909ENSPMGG00000001339ola19970.677Periophthalmus_magnuspinnatus
ENSCSAVG00000006512-10070.250ENSPMGG00000000277OLA19970.250Periophthalmus_magnuspinnatus
ENSCSAVG00000006512-10070.677ENSPEMG00000021970Ola19970.677Peromyscus_maniculatus_bairdii
ENSCSAVG00000006512-10070.927ENSPFOG00000016213ola19970.927Poecilia_formosa
ENSCSAVG00000006512-10070.927ENSPLAG00000016640ola19970.927Poecilia_latipinna
ENSCSAVG00000006512-10069.173ENSPLAG00000017971OLA19969.173Poecilia_latipinna
ENSCSAVG00000006512-10068.672ENSPMEG00000002033OLA19968.672Poecilia_mexicana
ENSCSAVG00000006512-10070.927ENSPMEG00000015915ola19970.927Poecilia_mexicana
ENSCSAVG00000006512-10060.652ENSPREG00000005840ola19960.652Poecilia_reticulata
ENSCSAVG00000006512-9570.712ENSPREG00000005171OLA19970.712Poecilia_reticulata
ENSCSAVG00000006512-10070.426ENSPPYG00000012943OLA19970.426Pongo_abelii
ENSCSAVG00000006512-10070.677ENSPCOG00000017353-9970.677Propithecus_coquereli
ENSCSAVG00000006512-10055.721ENSPCOG00000022010-8570.400Propithecus_coquereli
ENSCSAVG00000006512-9166.849ENSPVAG00000000982OLA19966.849Pteropus_vampyrus
ENSCSAVG00000006512-10070.677ENSPNYG00000014943ola19970.677Pundamilia_nyererei
ENSCSAVG00000006512-10069.173ENSPNYG00000007912OLA19969.173Pundamilia_nyererei
ENSCSAVG00000006512-10060.401ENSPNAG00000012638ola19960.401Pygocentrus_nattereri
ENSCSAVG00000006512-10069.925ENSRNOG00000019047Ola19969.925Rattus_norvegicus
ENSCSAVG00000006512-10068.215ENSRBIG00000006151OLA19968.215Rhinopithecus_bieti
ENSCSAVG00000006512-5863.203ENSRBIG00000018330-9473.810Rhinopithecus_bieti
ENSCSAVG00000006512-6151.659ENSRBIG00000013930-9869.048Rhinopithecus_bieti
ENSCSAVG00000006512-9853.846ENSRROG00000032626-9070.909Rhinopithecus_roxellana
ENSCSAVG00000006512-10070.677ENSRROG00000038551OLA19970.677Rhinopithecus_roxellana
ENSCSAVG00000006512-9836.020YHL014CYLF29639.130Saccharomyces_cerevisiae
ENSCSAVG00000006512-9852.525YBR025C-9852.525Saccharomyces_cerevisiae
ENSCSAVG00000006512-10059.750ENSSBOG00000031656-8975.000Saimiri_boliviensis_boliviensis
ENSCSAVG00000006512-10069.925ENSSBOG00000002999OLA19969.925Saimiri_boliviensis_boliviensis
ENSCSAVG00000006512-10071.178ENSSHAG00000014637OLA19971.178Sarcophilus_harrisii
ENSCSAVG00000006512-10071.178ENSSFOG00015018477ola19971.178Scleropages_formosus
ENSCSAVG00000006512-10070.927ENSSMAG00000017661ola19970.927Scophthalmus_maximus
ENSCSAVG00000006512-10068.828ENSSMAG00000014909OLA19968.844Scophthalmus_maximus
ENSCSAVG00000006512-10070.175ENSSDUG00000013714ola19970.175Seriola_dumerili
ENSCSAVG00000006512-9671.204ENSSDUG00000021482OLA19971.204Seriola_dumerili
ENSCSAVG00000006512-10069.576ENSSLDG00000018580OLA19969.576Seriola_lalandi_dorsalis
ENSCSAVG00000006512-10070.175ENSSLDG00000014654ola19970.175Seriola_lalandi_dorsalis
ENSCSAVG00000006512-10070.677ENSSARG00000010743OLA19970.677Sorex_araneus
ENSCSAVG00000006512-10070.927ENSSPUG00000002409OLA19970.927Sphenodon_punctatus
ENSCSAVG00000006512-10071.178ENSSPAG00000021138ola19971.178Stegastes_partitus
ENSCSAVG00000006512-10070.175ENSSPAG00000000415OLA19970.175Stegastes_partitus
ENSCSAVG00000006512-10070.854ENSSSCG00000015963OLA19970.854Sus_scrofa
ENSCSAVG00000006512-10069.750ENSTGUG00000008710-9969.750Taeniopygia_guttata
ENSCSAVG00000006512-9560.053ENSTRUG00000017614OLA19960.053Takifugu_rubripes
ENSCSAVG00000006512-10070.677ENSTRUG00000015215ola19971.178Takifugu_rubripes
ENSCSAVG00000006512-7567.333ENSTNIG00000017209ola19967.333Tetraodon_nigroviridis
ENSCSAVG00000006512-6885.106ENSTBEG00000007574OLA17085.106Tupaia_belangeri
ENSCSAVG00000006512-10069.674ENSTTRG00000016999OLA19969.674Tursiops_truncatus
ENSCSAVG00000006512-10070.677ENSUMAG00000015410OLA19570.677Ursus_maritimus
ENSCSAVG00000006512-10065.414ENSVPAG00000009660OLA19965.414Vicugna_pacos
ENSCSAVG00000006512-7167.368ENSVVUG00000014108-9367.368Vulpes_vulpes
ENSCSAVG00000006512-10070.677ENSVVUG00000012991-9870.677Vulpes_vulpes
ENSCSAVG00000006512-10070.426ENSXETG00000008500ola19970.426Xenopus_tropicalis
ENSCSAVG00000006512-10063.158ENSXCOG00000019180OLA19963.158Xiphophorus_couchianus
ENSCSAVG00000006512-10061.153ENSXCOG00000014121ola19961.153Xiphophorus_couchianus
ENSCSAVG00000006512-10069.173ENSXMAG00000005330OLA19969.173Xiphophorus_maculatus
ENSCSAVG00000006512-10070.927ENSXMAG00000009840ola19970.927Xiphophorus_maculatus

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