EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000006531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3152 bases
Position: chrreftig_20:691933-695084
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011176	Methyltransf_31	PF13847.6	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011307	-	802	-	ENSCSAVP00000011176	220 (aa)	-	H2Z0R4

Gene Model

Click here to download ENSCSAVG00000006531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000006531	-	81	32.973	ENSCSAVG00000003331	-	73	32.973
ENSCSAVG00000006531	-	63	31.159	ENSCSAVG00000004347	-	64	31.159
ENSCSAVG00000006531	-	67	30.872	ENSCSAVG00000007262	-	80	30.872
ENSCSAVG00000006531	-	65	30.137	ENSCSAVG00000011296	-	65	30.137
ENSCSAVG00000006531	-	75	30.409	ENSCSAVG00000011293	-	74	30.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006531	-	96	31.944	ENSCING00000019704	-	93	31.944	Ciona_intestinalis
ENSCSAVG00000006531	-	98	60.550	ENSCING00000004647	-	97	60.550	Ciona_intestinalis
ENSCSAVG00000006531	-	81	34.973	ENSCING00000005119	-	73	34.973	Ciona_intestinalis