EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000006544 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2165 bases
Position: chrreftig_19:536270-538434
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011189	DcpS_C	PF11969.8	1.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011320	-	732	-	ENSCSAVP00000011189	168 (aa)	-	H2Z0S7

Gene Model

Click here to download ENSCSAVG00000006544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000006544	-	71	65.833	ENSCSAVG00000008721	-	90	65.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006544	-	82	59.124	ENSG00000137133	HINT2	84	59.124	Homo_sapiens
ENSCSAVG00000006544	-	75	70.635	ENSAPOG00000005822	hint2	98	71.186	Acanthochromis_polyacanthus
ENSCSAVG00000006544	-	83	59.574	ENSAMEG00000009919	HINT2	85	59.574	Ailuropoda_melanoleuca
ENSCSAVG00000006544	-	77	68.992	ENSACIG00000024176	hint2	83	68.992	Amphilophus_citrinellus
ENSCSAVG00000006544	-	77	68.217	ENSAOCG00000018892	hint2	98	69.048	Amphiprion_ocellaris
ENSCSAVG00000006544	-	77	68.217	ENSAPEG00000012800	hint2	84	68.217	Amphiprion_percula
ENSCSAVG00000006544	-	76	68.750	ENSATEG00000001240	hint2	81	68.750	Anabas_testudineus
ENSCSAVG00000006544	-	54	72.222	ENSACAG00000003036	HINT2	87	72.222	Anolis_carolinensis
ENSCSAVG00000006544	-	82	59.124	ENSANAG00000036887	HINT2	84	59.124	Aotus_nancymaae
ENSCSAVG00000006544	-	77	68.992	ENSACLG00000020144	hint2	90	68.992	Astatotilapia_calliptera
ENSCSAVG00000006544	-	77	68.217	ENSAMXG00000016137	hint2	78	68.217	Astyanax_mexicanus
ENSCSAVG00000006544	-	82	59.420	ENSBTAG00000011444	HINT2	88	60.150	Bos_taurus
ENSCSAVG00000006544	-	76	63.281	ENSCJAG00000010068	HINT2	93	54.305	Callithrix_jacchus
ENSCSAVG00000006544	-	82	58.571	ENSCAFG00000002240	HINT2	84	58.993	Canis_familiaris
ENSCSAVG00000006544	-	76	57.812	ENSCAFG00020017487	HINT2	77	57.812	Canis_lupus_dingo
ENSCSAVG00000006544	-	82	59.420	ENSCHIG00000010130	HINT2	85	59.420	Capra_hircus
ENSCSAVG00000006544	-	82	58.696	ENSTSYG00000030020	-	84	59.124	Carlito_syrichta
ENSCSAVG00000006544	-	79	57.143	ENSTSYG00000000640	-	84	57.143	Carlito_syrichta
ENSCSAVG00000006544	-	85	57.534	ENSCAPG00000007065	HINT2	99	57.534	Cavia_aperea
ENSCSAVG00000006544	-	82	59.124	ENSCPOG00000040327	HINT2	93	55.263	Cavia_porcellus
ENSCSAVG00000006544	-	82	59.854	ENSCCAG00000023291	HINT2	93	55.263	Cebus_capucinus
ENSCSAVG00000006544	-	76	64.062	ENSCATG00000033387	HINT2	77	64.062	Cercocebus_atys
ENSCSAVG00000006544	-	60	48.515	ENSCLAG00000013492	-	95	48.515	Chinchilla_lanigera
ENSCSAVG00000006544	-	76	64.062	ENSCLAG00000002682	-	93	55.263	Chinchilla_lanigera
ENSCSAVG00000006544	-	82	59.854	ENSCSAG00000010622	HINT2	84	59.854	Chlorocebus_sabaeus
ENSCSAVG00000006544	-	77	60.902	ENSCPBG00000002797	HINT2	99	60.902	Chrysemys_picta_bellii
ENSCSAVG00000006544	-	77	58.015	ENSCING00000023160	-	100	58.015	Ciona_intestinalis
ENSCSAVG00000006544	-	100	68.391	ENSCING00000011420	-	100	68.391	Ciona_intestinalis
ENSCSAVG00000006544	-	76	63.281	ENSCANG00000042118	HINT2	77	63.281	Colobus_angolensis_palliatus
ENSCSAVG00000006544	-	77	60.000	ENSCGRG00001022361	Hint2	80	60.000	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006544	-	77	60.000	ENSCGRG00000017831	Hint2	80	60.000	Cricetulus_griseus_crigri
ENSCSAVG00000006544	-	71	63.025	ENSCSEG00000003930	hint1	94	63.025	Cynoglossus_semilaevis
ENSCSAVG00000006544	-	76	67.188	ENSCSEG00000018825	hint2	92	68.966	Cynoglossus_semilaevis
ENSCSAVG00000006544	-	71	60.504	ENSCVAG00000013656	hint1	94	60.504	Cyprinodon_variegatus
ENSCSAVG00000006544	-	77	67.442	ENSCVAG00000015693	hint2	88	67.442	Cyprinodon_variegatus
ENSCSAVG00000006544	-	71	62.185	ENSDARG00000103824	hint1	94	62.185	Danio_rerio
ENSCSAVG00000006544	-	77	66.923	ENSDARG00000100938	hint2	81	66.923	Danio_rerio
ENSCSAVG00000006544	-	65	67.273	ENSDNOG00000009083	HINT2	77	64.062	Dasypus_novemcinctus
ENSCSAVG00000006544	-	79	61.654	ENSDORG00000006268	Hint2	82	61.654	Dipodomys_ordii
ENSCSAVG00000006544	-	78	59.542	FBgn0031459	CG2862	100	60.000	Drosophila_melanogaster
ENSCSAVG00000006544	-	77	63.566	ENSETEG00000017929	HINT2	93	57.237	Echinops_telfairi
ENSCSAVG00000006544	-	77	61.538	ENSEBUG00000015709	-	100	61.538	Eptatretus_burgeri
ENSCSAVG00000006544	-	76	60.305	ENSEBUG00000009253	hint2	76	60.305	Eptatretus_burgeri
ENSCSAVG00000006544	-	82	55.714	ENSEASG00005014042	HINT2	84	55.714	Equus_asinus_asinus
ENSCSAVG00000006544	-	82	54.745	ENSECAG00000000037	HINT2	84	54.348	Equus_caballus
ENSCSAVG00000006544	-	79	61.654	ENSEEUG00000011866	HINT2	98	61.654	Erinaceus_europaeus
ENSCSAVG00000006544	-	95	60.000	ENSELUG00000014618	HINT2	95	60.000	Esox_lucius
ENSCSAVG00000006544	-	65	64.545	ENSELUG00000016515	hint1	87	64.545	Esox_lucius
ENSCSAVG00000006544	-	76	62.500	ENSFCAG00000012755	HINT2	77	62.500	Felis_catus
ENSCSAVG00000006544	-	66	64.865	ENSFALG00000000137	HINT2	99	63.717	Ficedula_albicollis
ENSCSAVG00000006544	-	79	62.406	ENSFDAG00000007090	HINT2	85	61.594	Fukomys_damarensis
ENSCSAVG00000006544	-	77	67.442	ENSFHEG00000004041	hint2	70	67.442	Fundulus_heteroclitus
ENSCSAVG00000006544	-	71	62.185	ENSFHEG00000001761	hint1	67	62.185	Fundulus_heteroclitus
ENSCSAVG00000006544	-	68	60.526	ENSGMOG00000005105	hint1	90	60.526	Gadus_morhua
ENSCSAVG00000006544	-	76	61.719	ENSGALG00000027418	-	80	61.719	Gallus_gallus
ENSCSAVG00000006544	-	71	62.185	ENSGAFG00000001228	hint1	94	62.185	Gambusia_affinis
ENSCSAVG00000006544	-	77	68.217	ENSGAFG00000016884	hint2	98	69.048	Gambusia_affinis
ENSCSAVG00000006544	-	82	59.124	ENSGGOG00000011265	HINT2	84	59.124	Gorilla_gorilla
ENSCSAVG00000006544	-	77	68.992	ENSHBUG00000007106	hint2	90	68.992	Haplochromis_burtoni
ENSCSAVG00000006544	-	82	58.993	ENSHGLG00000018803	HINT2	84	58.993	Heterocephalus_glaber_female
ENSCSAVG00000006544	-	82	58.993	ENSHGLG00100009260	HINT2	84	58.993	Heterocephalus_glaber_male
ENSCSAVG00000006544	-	77	65.891	ENSHCOG00000008201	hint2	98	67.500	Hippocampus_comes
ENSCSAVG00000006544	-	71	61.345	ENSIPUG00000003460	hint1	94	61.345	Ictalurus_punctatus
ENSCSAVG00000006544	-	82	65.217	ENSIPUG00000015540	Hint2	82	65.217	Ictalurus_punctatus
ENSCSAVG00000006544	-	82	59.420	ENSSTOG00000006975	HINT2	93	55.921	Ictidomys_tridecemlineatus
ENSCSAVG00000006544	-	85	61.268	ENSJJAG00000005863	Hint2	89	64.179	Jaculus_jaculus
ENSCSAVG00000006544	-	77	65.891	ENSKMAG00000007624	hint2	93	65.891	Kryptolebias_marmoratus
ENSCSAVG00000006544	-	76	70.312	ENSLBEG00000026254	hint2	99	62.500	Labrus_bergylta
ENSCSAVG00000006544	-	80	60.584	ENSLACG00000013400	HINT2	97	59.286	Latimeria_chalumnae
ENSCSAVG00000006544	-	74	68.548	ENSLOCG00000011981	hint2	98	68.548	Lepisosteus_oculatus
ENSCSAVG00000006544	-	76	63.281	ENSLAFG00000015022	HINT2	77	63.281	Loxodonta_africana
ENSCSAVG00000006544	-	82	59.854	ENSMFAG00000034091	HINT2	84	59.854	Macaca_fascicularis
ENSCSAVG00000006544	-	82	59.854	ENSMMUG00000016337	HINT2	84	59.854	Macaca_mulatta
ENSCSAVG00000006544	-	82	59.854	ENSMNEG00000044230	HINT2	93	55.263	Macaca_nemestrina
ENSCSAVG00000006544	-	77	62.016	ENSMLEG00000029409	HINT2	95	62.016	Mandrillus_leucophaeus
ENSCSAVG00000006544	-	77	63.566	ENSMAMG00000006530	hint2	83	63.566	Mastacembelus_armatus
ENSCSAVG00000006544	-	77	68.992	ENSMZEG00005013690	hint2	90	68.992	Maylandia_zebra
ENSCSAVG00000006544	-	71	65.289	ENSMAUG00000008164	Hint2	74	65.289	Mesocricetus_auratus
ENSCSAVG00000006544	-	82	59.854	ENSMICG00000002572	HINT2	77	64.844	Microcebus_murinus
ENSCSAVG00000006544	-	77	60.000	ENSMOCG00000022371	Hint2	80	60.000	Microtus_ochrogaster
ENSCSAVG00000006544	-	77	65.116	ENSMMOG00000017956	hint2	71	65.116	Mola_mola
ENSCSAVG00000006544	-	71	62.185	ENSMMOG00000007854	hint1	94	62.185	Mola_mola
ENSCSAVG00000006544	-	76	63.281	ENSMODG00000006947	HINT2	98	63.281	Monodelphis_domestica
ENSCSAVG00000006544	-	65	61.818	ENSMALG00000001063	hint1	87	61.818	Monopterus_albus
ENSCSAVG00000006544	-	77	67.442	ENSMALG00000005121	hint2	79	67.442	Monopterus_albus
ENSCSAVG00000006544	-	77	59.231	MGP_CAROLIEiJ_G0025948	Hint2	93	53.947	Mus_caroli
ENSCSAVG00000006544	-	77	59.231	ENSMUSG00000028470	Hint2	80	59.231	Mus_musculus
ENSCSAVG00000006544	-	87	56.849	MGP_PahariEiJ_G0024093	Hint2	88	56.849	Mus_pahari
ENSCSAVG00000006544	-	77	59.231	MGP_SPRETEiJ_G0026909	Hint2	93	53.947	Mus_spretus
ENSCSAVG00000006544	-	76	59.375	ENSMPUG00000005589	HINT2	84	56.115	Mustela_putorius_furo
ENSCSAVG00000006544	-	85	59.155	ENSMLUG00000023856	HINT2	86	59.155	Myotis_lucifugus
ENSCSAVG00000006544	-	76	64.844	ENSNGAG00000003065	Hint2	77	64.844	Nannospalax_galili
ENSCSAVG00000006544	-	86	65.101	ENSNBRG00000022918	hint2	99	71.186	Neolamprologus_brichardi
ENSCSAVG00000006544	-	82	59.854	ENSNLEG00000033123	HINT2	84	59.854	Nomascus_leucogenys
ENSCSAVG00000006544	-	65	67.273	ENSODEG00000013829	HINT2	88	57.931	Octodon_degus
ENSCSAVG00000006544	-	79	60.150	ENSOCUG00000027206	-	80	60.150	Oryctolagus_cuniculus
ENSCSAVG00000006544	-	79	56.391	ENSOCUG00000006472	-	93	51.974	Oryctolagus_cuniculus
ENSCSAVG00000006544	-	97	56.970	ENSORLG00000001235	hint2	88	56.970	Oryzias_latipes
ENSCSAVG00000006544	-	87	60.274	ENSORLG00020009336	hint2	95	69.912	Oryzias_latipes_hni
ENSCSAVG00000006544	-	97	57.055	ENSORLG00015018872	hint2	95	69.027	Oryzias_latipes_hsok
ENSCSAVG00000006544	-	79	62.879	ENSOMEG00000012866	hint2	88	62.879	Oryzias_melastigma
ENSCSAVG00000006544	-	77	60.000	ENSOGAG00000011830	HINT2	80	60.000	Otolemur_garnettii
ENSCSAVG00000006544	-	82	59.420	ENSOARG00000011729	HINT2	85	59.420	Ovis_aries
ENSCSAVG00000006544	-	82	59.124	ENSPPAG00000002836	HINT2	84	59.124	Pan_paniscus
ENSCSAVG00000006544	-	82	56.934	ENSPPRG00000020701	HINT2	97	52.795	Panthera_pardus
ENSCSAVG00000006544	-	91	52.941	ENSPTIG00000015400	HINT2	99	55.484	Panthera_tigris_altaica
ENSCSAVG00000006544	-	82	59.124	ENSPTRG00000020923	HINT2	84	59.124	Pan_troglodytes
ENSCSAVG00000006544	-	82	59.854	ENSPANG00000025487	HINT2	79	62.016	Papio_anubis
ENSCSAVG00000006544	-	83	62.590	ENSPKIG00000024049	hint2	97	66.942	Paramormyrops_kingsleyae
ENSCSAVG00000006544	-	71	61.345	ENSPKIG00000021119	hint1	83	61.345	Paramormyrops_kingsleyae
ENSCSAVG00000006544	-	100	56.213	ENSPMGG00000006589	hint2	88	72.973	Periophthalmus_magnuspinnatus
ENSCSAVG00000006544	-	77	59.231	ENSPEMG00000014390	Hint2	80	59.231	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006544	-	78	58.779	ENSPMAG00000006075	hint1	87	58.779	Petromyzon_marinus
ENSCSAVG00000006544	-	76	63.359	ENSPMAG00000002715	hint2	75	63.359	Petromyzon_marinus
ENSCSAVG00000006544	-	57	50.515	ENSPCIG00000021660	-	61	48.696	Phascolarctos_cinereus
ENSCSAVG00000006544	-	77	67.442	ENSPFOG00000007209	hint2	79	67.442	Poecilia_formosa
ENSCSAVG00000006544	-	71	60.504	ENSPFOG00000012020	hint1	94	60.504	Poecilia_formosa
ENSCSAVG00000006544	-	71	60.504	ENSPLAG00000003800	hint1	94	60.504	Poecilia_latipinna
ENSCSAVG00000006544	-	77	68.217	ENSPLAG00000004768	hint2	97	70.339	Poecilia_latipinna
ENSCSAVG00000006544	-	77	67.442	ENSPMEG00000017523	hint2	77	67.442	Poecilia_mexicana
ENSCSAVG00000006544	-	71	60.504	ENSPMEG00000016327	hint1	94	60.504	Poecilia_mexicana
ENSCSAVG00000006544	-	71	60.504	ENSPREG00000003867	hint1	94	60.504	Poecilia_reticulata
ENSCSAVG00000006544	-	79	67.424	ENSPREG00000008004	hint2	80	67.424	Poecilia_reticulata
ENSCSAVG00000006544	-	82	59.124	ENSPPYG00000019082	HINT2	84	59.124	Pongo_abelii
ENSCSAVG00000006544	-	77	61.240	ENSPCOG00000023948	HINT2	93	55.263	Propithecus_coquereli
ENSCSAVG00000006544	-	82	58.394	ENSPVAG00000003028	HINT2	84	58.394	Pteropus_vampyrus
ENSCSAVG00000006544	-	77	68.992	ENSPNYG00000017024	hint2	99	69.531	Pundamilia_nyererei
ENSCSAVG00000006544	-	91	63.871	ENSPNAG00000029879	hint2	95	63.871	Pygocentrus_nattereri
ENSCSAVG00000006544	-	77	59.231	ENSRNOG00000015866	Hint2	80	59.231	Rattus_norvegicus
ENSCSAVG00000006544	-	82	59.124	ENSRBIG00000044870	HINT2	84	59.124	Rhinopithecus_bieti
ENSCSAVG00000006544	-	82	59.124	ENSRROG00000035123	HINT2	84	59.124	Rhinopithecus_roxellana
ENSCSAVG00000006544	-	77	62.308	ENSSBOG00000025840	HINT2	88	57.241	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006544	-	65	58.182	ENSSHAG00000012507	-	87	58.182	Sarcophilus_harrisii
ENSCSAVG00000006544	-	65	67.273	ENSSHAG00000013965	HINT2	91	63.281	Sarcophilus_harrisii
ENSCSAVG00000006544	-	70	65.254	ENSSFOG00015001540	hint2	87	57.857	Scleropages_formosus
ENSCSAVG00000006544	-	77	66.667	ENSSMAG00000008382	hint2	72	66.667	Scophthalmus_maximus
ENSCSAVG00000006544	-	77	68.217	ENSSDUG00000022415	hint2	72	68.217	Seriola_dumerili
ENSCSAVG00000006544	-	98	58.182	ENSSLDG00000004617	hint2	93	67.500	Seriola_lalandi_dorsalis
ENSCSAVG00000006544	-	92	61.111	ENSSPAG00000013723	hint2	86	61.111	Stegastes_partitus
ENSCSAVG00000006544	-	67	63.717	ENSTGUG00000001823	HINT2	99	63.717	Taeniopygia_guttata
ENSCSAVG00000006544	-	91	61.438	ENSTRUG00000023015	hint2	96	69.167	Takifugu_rubripes
ENSCSAVG00000006544	-	71	65.546	ENSTRUG00000009900	hint1	94	65.546	Takifugu_rubripes
ENSCSAVG00000006544	-	76	68.750	ENSTNIG00000015580	hint2	79	68.750	Tetraodon_nigroviridis
ENSCSAVG00000006544	-	82	58.394	ENSTBEG00000013020	HINT2	84	58.394	Tupaia_belangeri
ENSCSAVG00000006544	-	82	59.124	ENSTTRG00000011932	HINT2	84	59.124	Tursiops_truncatus
ENSCSAVG00000006544	-	82	58.571	ENSUAMG00000009907	HINT2	61	58.571	Ursus_americanus
ENSCSAVG00000006544	-	96	52.410	ENSUMAG00000007451	HINT2	97	52.410	Ursus_maritimus
ENSCSAVG00000006544	-	82	59.124	ENSVPAG00000005592	HINT2	84	59.124	Vicugna_pacos
ENSCSAVG00000006544	-	76	57.812	ENSVVUG00000020192	HINT2	51	57.812	Vulpes_vulpes
ENSCSAVG00000006544	-	61	54.286	ENSXETG00000005083	hint2	65	54.286	Xenopus_tropicalis
ENSCSAVG00000006544	-	82	65.942	ENSXCOG00000009621	hint2	97	68.548	Xiphophorus_couchianus
ENSCSAVG00000006544	-	71	62.185	ENSXMAG00000023903	hint1	94	62.185	Xiphophorus_maculatus
ENSCSAVG00000006544	-	82	65.693	ENSXMAG00000026925	hint2	81	68.217	Xiphophorus_maculatus