EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000006547 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
8430 bases
Position
chrreftig_551:248378-256807
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000011192RRM_1PF00076.221.7e-2111
ENSCSAVP00000011194RRM_1PF00076.222.2e-1911
ENSCSAVP00000011193RRM_1PF00076.222.3e-1911
ENSCSAVP00000011195RRM_1PF00076.222.5e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000011326-948-ENSCSAVP00000011195316 (aa)-H2Z0T3
ENSCSAVT00000011325-1004-ENSCSAVP00000011194295 (aa)-H2Z0T2
ENSCSAVT00000011324-970-ENSCSAVP00000011193301 (aa)-H2Z0T1
ENSCSAVT00000011323-979-ENSCSAVP00000011192294 (aa)-H2Z0T0
Gene Model
Click here to download ENSCSAVG00000006547's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006547's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000006547-9963.758FBgn0028382cyp339963.758Drosophila_melanogaster
ENSCSAVG00000006547-9853.872ENSEASG00005014125-9764.865Equus_asinus_asinus
ENSCSAVG00000006547-7179.365ENSEEUG00000010232-7579.365Erinaceus_europaeus
ENSCSAVG00000006547-9967.224ENSLBEG00000013607-9867.224Labrus_bergylta
ENSCSAVG00000006547-9967.667ENSORLG00000017469-9867.667Oryzias_latipes
ENSCSAVG00000006547-9967.667ENSORLG00020018669-9867.667Oryzias_latipes_hni
ENSCSAVG00000006547-9766.096ENSPKIG00000009753-9966.096Paramormyrops_kingsleyae

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