EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006556 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3705 bases
Position: chrreftig_193:85410-89114
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011207	GCD14	PF08704.10	6.1e-89	1	1
ENSCSAVP00000011207	Methyltransf_31	PF13847.6	7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011338	-	888	-	ENSCSAVP00000011207	284 (aa)	-	H2Z0U5

Gene Model

Click here to download ENSCSAVG00000006556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006556	-	90	55.039	ENSG00000166166	TRMT61A	89	55.039	Homo_sapiens
ENSCSAVG00000006556	-	88	59.055	ENSAPOG00000004599	trmt61a	85	59.055	Acanthochromis_polyacanthus
ENSCSAVG00000006556	-	88	55.336	ENSAMEG00000018154	TRMT61A	87	55.336	Ailuropoda_melanoleuca
ENSCSAVG00000006556	-	88	57.937	ENSACIG00000023818	trmt61a	84	57.937	Amphilophus_citrinellus
ENSCSAVG00000006556	-	88	58.661	ENSAOCG00000016986	trmt61a	85	58.661	Amphiprion_ocellaris
ENSCSAVG00000006556	-	88	58.268	ENSAPEG00000003541	trmt61a	85	58.268	Amphiprion_percula
ENSCSAVG00000006556	-	94	58.889	ENSATEG00000017286	trmt61a	88	58.889	Anabas_testudineus
ENSCSAVG00000006556	-	94	57.249	ENSAPLG00000011344	TRMT61A	86	57.249	Anas_platyrhynchos
ENSCSAVG00000006556	-	90	60.311	ENSACAG00000000860	TRMT61A	88	60.311	Anolis_carolinensis
ENSCSAVG00000006556	-	90	55.039	ENSANAG00000020615	TRMT61A	89	55.039	Aotus_nancymaae
ENSCSAVG00000006556	-	88	58.333	ENSACLG00000010779	trmt61a	87	58.333	Astatotilapia_calliptera
ENSCSAVG00000006556	-	90	60.465	ENSAMXG00000037952	trmt61a	83	60.465	Astyanax_mexicanus
ENSCSAVG00000006556	-	88	54.941	ENSBTAG00000031327	TRMT61A	88	54.941	Bos_taurus
ENSCSAVG00000006556	-	82	48.498	WBGene00012192	W02A11.1	74	48.498	Caenorhabditis_elegans
ENSCSAVG00000006556	-	90	55.039	ENSCJAG00000017117	TRMT61A	89	55.039	Callithrix_jacchus
ENSCSAVG00000006556	-	88	54.941	ENSCAFG00000029557	TRMT61A	87	54.941	Canis_familiaris
ENSCSAVG00000006556	-	88	55.336	ENSCAFG00020008720	TRMT61A	87	55.336	Canis_lupus_dingo
ENSCSAVG00000006556	-	88	55.336	ENSCHIG00000021168	TRMT61A	88	55.336	Capra_hircus
ENSCSAVG00000006556	-	88	54.941	ENSTSYG00000025609	TRMT61A	87	54.941	Carlito_syrichta
ENSCSAVG00000006556	-	88	54.545	ENSCAPG00000003680	TRMT61A	89	54.545	Cavia_aperea
ENSCSAVG00000006556	-	88	54.545	ENSCPOG00000033200	TRMT61A	87	54.545	Cavia_porcellus
ENSCSAVG00000006556	-	90	55.039	ENSCCAG00000021969	TRMT61A	89	55.039	Cebus_capucinus
ENSCSAVG00000006556	-	90	55.039	ENSCATG00000000028	TRMT61A	89	55.039	Cercocebus_atys
ENSCSAVG00000006556	-	88	54.941	ENSCLAG00000007887	TRMT61A	87	54.941	Chinchilla_lanigera
ENSCSAVG00000006556	-	90	55.039	ENSCSAG00000010059	TRMT61A	89	55.039	Chlorocebus_sabaeus
ENSCSAVG00000006556	-	65	57.979	ENSCHOG00000010189	TRMT61A	94	57.979	Choloepus_hoffmanni
ENSCSAVG00000006556	-	90	59.144	ENSCPBG00000020287	TRMT61A	83	59.144	Chrysemys_picta_bellii
ENSCSAVG00000006556	-	95	80.741	ENSCING00000018222	-	89	80.741	Ciona_intestinalis
ENSCSAVG00000006556	-	90	55.039	ENSCANG00000031243	TRMT61A	89	55.039	Colobus_angolensis_palliatus
ENSCSAVG00000006556	-	89	55.469	ENSCGRG00001020952	Trmt61a	88	55.469	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006556	-	89	55.469	ENSCGRG00000005700	Trmt61a	88	55.469	Cricetulus_griseus_crigri
ENSCSAVG00000006556	-	88	60.474	ENSCSEG00000013165	trmt61a	84	60.474	Cynoglossus_semilaevis
ENSCSAVG00000006556	-	88	60.079	ENSCVAG00000018399	trmt61a	83	60.079	Cyprinodon_variegatus
ENSCSAVG00000006556	-	88	63.636	ENSDARG00000008480	trmt61a	100	66.480	Danio_rerio
ENSCSAVG00000006556	-	88	37.643	ENSDNOG00000035967	TRMT61A	88	37.879	Dasypus_novemcinctus
ENSCSAVG00000006556	-	89	54.118	ENSDORG00000014905	Trmt61a	88	54.118	Dipodomys_ordii
ENSCSAVG00000006556	-	88	52.672	FBgn0039407	CG14544	82	52.672	Drosophila_melanogaster
ENSCSAVG00000006556	-	69	51.269	ENSETEG00000008670	TRMT61A	99	51.269	Echinops_telfairi
ENSCSAVG00000006556	-	88	55.731	ENSEASG00005004127	TRMT61A	88	55.731	Equus_asinus_asinus
ENSCSAVG00000006556	-	88	55.731	ENSECAG00000012599	TRMT61A	88	55.731	Equus_caballus
ENSCSAVG00000006556	-	88	62.055	ENSELUG00000012611	trmt61a	85	62.055	Esox_lucius
ENSCSAVG00000006556	-	88	54.941	ENSFCAG00000030816	TRMT61A	87	54.941	Felis_catus
ENSCSAVG00000006556	-	90	59.144	ENSFALG00000002855	TRMT61A	83	59.144	Ficedula_albicollis
ENSCSAVG00000006556	-	88	54.545	ENSFDAG00000007454	TRMT61A	87	54.545	Fukomys_damarensis
ENSCSAVG00000006556	-	88	59.684	ENSFHEG00000010814	trmt61a	82	59.684	Fundulus_heteroclitus
ENSCSAVG00000006556	-	85	58.025	ENSGMOG00000011395	trmt61a	99	58.025	Gadus_morhua
ENSCSAVG00000006556	-	94	56.877	ENSGALG00000011522	TRMT61A	87	56.877	Gallus_gallus
ENSCSAVG00000006556	-	88	58.893	ENSGAFG00000011815	trmt61a	88	56.667	Gambusia_affinis
ENSCSAVG00000006556	-	92	58.397	ENSGACG00000004779	trmt61a	86	58.397	Gasterosteus_aculeatus
ENSCSAVG00000006556	-	90	59.144	ENSGAGG00000015121	TRMT61A	83	59.144	Gopherus_agassizii
ENSCSAVG00000006556	-	90	55.039	ENSGGOG00000007401	TRMT61A	89	55.039	Gorilla_gorilla
ENSCSAVG00000006556	-	88	58.730	ENSHBUG00000022709	trmt61a	84	58.730	Haplochromis_burtoni
ENSCSAVG00000006556	-	88	56.126	ENSHGLG00000005604	TRMT61A	87	56.126	Heterocephalus_glaber_female
ENSCSAVG00000006556	-	88	56.126	ENSHGLG00100008206	TRMT61A	87	56.126	Heterocephalus_glaber_male
ENSCSAVG00000006556	-	88	58.103	ENSHCOG00000000889	trmt61a	86	58.103	Hippocampus_comes
ENSCSAVG00000006556	-	94	57.194	ENSIPUG00000003613	trmt61a	90	57.194	Ictalurus_punctatus
ENSCSAVG00000006556	-	89	54.688	ENSSTOG00000009792	TRMT61A	86	54.688	Ictidomys_tridecemlineatus
ENSCSAVG00000006556	-	88	55.731	ENSJJAG00000000428	Trmt61a	88	55.731	Jaculus_jaculus
ENSCSAVG00000006556	-	88	59.684	ENSKMAG00000018005	trmt61a	86	59.684	Kryptolebias_marmoratus
ENSCSAVG00000006556	-	88	58.893	ENSLBEG00000004835	trmt61a	84	58.893	Labrus_bergylta
ENSCSAVG00000006556	-	88	59.289	ENSLACG00000010801	TRMT61A	81	59.289	Latimeria_chalumnae
ENSCSAVG00000006556	-	95	56.044	ENSLOCG00000009920	trmt61a	92	56.044	Lepisosteus_oculatus
ENSCSAVG00000006556	-	88	55.731	ENSLAFG00000014714	TRMT61A	88	55.731	Loxodonta_africana
ENSCSAVG00000006556	-	90	55.039	ENSMFAG00000032239	TRMT61A	89	55.039	Macaca_fascicularis
ENSCSAVG00000006556	-	88	55.556	ENSMMUG00000007673	TRMT61A	88	55.556	Macaca_mulatta
ENSCSAVG00000006556	-	90	55.039	ENSMNEG00000036125	TRMT61A	89	55.039	Macaca_nemestrina
ENSCSAVG00000006556	-	90	55.039	ENSMLEG00000027585	TRMT61A	89	55.039	Mandrillus_leucophaeus
ENSCSAVG00000006556	-	96	57.299	ENSMAMG00000000062	trmt61a	89	57.299	Mastacembelus_armatus
ENSCSAVG00000006556	-	88	58.333	ENSMZEG00005001914	trmt61a	84	58.333	Maylandia_zebra
ENSCSAVG00000006556	-	94	56.877	ENSMGAG00000013412	TRMT61A	87	56.877	Meleagris_gallopavo
ENSCSAVG00000006556	-	90	55.212	ENSMAUG00000007728	Trmt61a	89	55.212	Mesocricetus_auratus
ENSCSAVG00000006556	-	88	55.336	ENSMICG00000047207	TRMT61A	87	55.336	Microcebus_murinus
ENSCSAVG00000006556	-	90	55.212	ENSMOCG00000014726	Trmt61a	89	55.212	Microtus_ochrogaster
ENSCSAVG00000006556	-	88	59.684	ENSMMOG00000014772	trmt61a	90	59.684	Mola_mola
ENSCSAVG00000006556	-	88	59.127	ENSMODG00000013507	TRMT61A	60	59.127	Monodelphis_domestica
ENSCSAVG00000006556	-	60	58.235	ENSMALG00000021531	trmt61a	61	58.235	Monopterus_albus
ENSCSAVG00000006556	-	88	55.731	MGP_CAROLIEiJ_G0018137	Trmt61a	87	55.731	Mus_caroli
ENSCSAVG00000006556	-	88	55.731	ENSMUSG00000060950	Trmt61a	100	56.725	Mus_musculus
ENSCSAVG00000006556	-	88	55.731	MGP_PahariEiJ_G0029894	Trmt61a	87	55.731	Mus_pahari
ENSCSAVG00000006556	-	88	55.731	MGP_SPRETEiJ_G0018986	Trmt61a	87	55.731	Mus_spretus
ENSCSAVG00000006556	-	88	55.731	ENSMPUG00000002358	TRMT61A	88	55.731	Mustela_putorius_furo
ENSCSAVG00000006556	-	89	55.469	ENSNGAG00000021119	Trmt61a	88	55.469	Nannospalax_galili
ENSCSAVG00000006556	-	91	57.143	ENSNBRG00000023686	trmt61a	87	57.143	Neolamprologus_brichardi
ENSCSAVG00000006556	-	90	35.849	ENSNLEG00000016202	-	87	35.849	Nomascus_leucogenys
ENSCSAVG00000006556	-	88	60.474	ENSMEUG00000005233	TRMT61A	90	60.474	Notamacropus_eugenii
ENSCSAVG00000006556	-	51	58.621	ENSOPRG00000009039	TRMT61A	81	58.621	Ochotona_princeps
ENSCSAVG00000006556	-	88	54.150	ENSODEG00000001775	TRMT61A	89	54.150	Octodon_degus
ENSCSAVG00000006556	-	88	58.333	ENSONIG00000012420	trmt61a	84	58.333	Oreochromis_niloticus
ENSCSAVG00000006556	-	50	58.042	ENSOANG00000000785	-	73	58.042	Ornithorhynchus_anatinus
ENSCSAVG00000006556	-	88	54.941	ENSOCUG00000022502	TRMT61A	87	54.941	Oryctolagus_cuniculus
ENSCSAVG00000006556	-	88	60.474	ENSORLG00000017903	trmt61a	83	60.474	Oryzias_latipes
ENSCSAVG00000006556	-	94	57.993	ENSORLG00020013741	trmt61a	88	57.993	Oryzias_latipes_hni
ENSCSAVG00000006556	-	88	59.684	ENSORLG00015010153	trmt61a	77	59.684	Oryzias_latipes_hsok
ENSCSAVG00000006556	-	95	57.721	ENSOMEG00000003744	-	90	57.721	Oryzias_melastigma
ENSCSAVG00000006556	-	88	54.941	ENSOGAG00000027762	TRMT61A	87	54.941	Otolemur_garnettii
ENSCSAVG00000006556	-	62	55.056	ENSOARG00000005895	TRMT61A	92	55.056	Ovis_aries
ENSCSAVG00000006556	-	90	55.039	ENSPPAG00000027799	TRMT61A	89	55.039	Pan_paniscus
ENSCSAVG00000006556	-	88	54.941	ENSPPRG00000009410	TRMT61A	87	54.941	Panthera_pardus
ENSCSAVG00000006556	-	69	55.838	ENSPTIG00000012664	TRMT61A	68	55.838	Panthera_tigris_altaica
ENSCSAVG00000006556	-	90	55.039	ENSPTRG00000006757	TRMT61A	89	55.039	Pan_troglodytes
ENSCSAVG00000006556	-	90	55.039	ENSPANG00000007028	TRMT61A	89	55.039	Papio_anubis
ENSCSAVG00000006556	-	89	60.156	ENSPKIG00000019170	-	85	60.156	Paramormyrops_kingsleyae
ENSCSAVG00000006556	-	94	56.985	ENSPSIG00000015186	TRMT61A	88	56.985	Pelodiscus_sinensis
ENSCSAVG00000006556	-	88	59.524	ENSPMGG00000011374	trmt61a	87	56.929	Periophthalmus_magnuspinnatus
ENSCSAVG00000006556	-	89	54.688	ENSPEMG00000023413	Trmt61a	88	54.688	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006556	-	97	54.122	ENSPMAG00000009190	TRMT61A	89	54.122	Petromyzon_marinus
ENSCSAVG00000006556	-	70	61.500	ENSPCIG00000011257	-	67	61.500	Phascolarctos_cinereus
ENSCSAVG00000006556	-	88	59.289	ENSPFOG00000007249	trmt61a	88	57.249	Poecilia_formosa
ENSCSAVG00000006556	-	88	59.684	ENSPLAG00000013604	trmt61a	88	57.621	Poecilia_latipinna
ENSCSAVG00000006556	-	94	57.249	ENSPMEG00000006985	trmt61a	88	57.249	Poecilia_mexicana
ENSCSAVG00000006556	-	88	59.289	ENSPREG00000005313	trmt61a	88	57.249	Poecilia_reticulata
ENSCSAVG00000006556	-	90	55.039	ENSPPYG00000006172	-	65	55.039	Pongo_abelii
ENSCSAVG00000006556	-	88	54.150	ENSPCAG00000010827	TRMT61A	91	54.150	Procavia_capensis
ENSCSAVG00000006556	-	88	54.941	ENSPCOG00000028487	TRMT61A	87	54.941	Propithecus_coquereli
ENSCSAVG00000006556	-	88	58.730	ENSPNYG00000016989	trmt61a	84	58.730	Pundamilia_nyererei
ENSCSAVG00000006556	-	95	59.041	ENSPNAG00000029500	trmt61a	88	59.041	Pygocentrus_nattereri
ENSCSAVG00000006556	-	89	55.469	ENSRNOG00000011398	Trmt61a	88	55.469	Rattus_norvegicus
ENSCSAVG00000006556	-	90	55.039	ENSRBIG00000042669	TRMT61A	89	55.039	Rhinopithecus_bieti
ENSCSAVG00000006556	-	90	55.039	ENSRROG00000042448	TRMT61A	89	55.039	Rhinopithecus_roxellana
ENSCSAVG00000006556	-	86	39.259	YJL125C	GCD14	69	39.259	Saccharomyces_cerevisiae
ENSCSAVG00000006556	-	88	55.378	ENSSBOG00000022999	TRMT61A	90	55.378	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006556	-	70	62.000	ENSSHAG00000016357	TRMT61A	99	62.000	Sarcophilus_harrisii
ENSCSAVG00000006556	-	89	60.156	ENSSFOG00015013951	trmt61a	84	60.156	Scleropages_formosus
ENSCSAVG00000006556	-	88	59.289	ENSSMAG00000005682	trmt61a	84	59.289	Scophthalmus_maximus
ENSCSAVG00000006556	-	94	55.762	ENSSDUG00000004840	trmt61a	88	55.762	Seriola_dumerili
ENSCSAVG00000006556	-	96	55.839	ENSSLDG00000014160	trmt61a	89	55.839	Seriola_lalandi_dorsalis
ENSCSAVG00000006556	-	90	59.144	ENSSPUG00000004293	TRMT61A	83	59.144	Sphenodon_punctatus
ENSCSAVG00000006556	-	88	58.268	ENSSPAG00000017259	trmt61a	86	58.268	Stegastes_partitus
ENSCSAVG00000006556	-	88	54.941	ENSSSCG00000034738	TRMT61A	88	54.941	Sus_scrofa
ENSCSAVG00000006556	-	100	54.895	ENSTGUG00000012865	-	96	54.895	Taeniopygia_guttata
ENSCSAVG00000006556	-	88	59.684	ENSTRUG00000007942	trmt61a	84	59.684	Takifugu_rubripes
ENSCSAVG00000006556	-	92	59.245	ENSTNIG00000012391	trmt61a	91	59.245	Tetraodon_nigroviridis
ENSCSAVG00000006556	-	88	55.731	ENSTTRG00000006456	TRMT61A	82	55.731	Tursiops_truncatus
ENSCSAVG00000006556	-	88	55.336	ENSUAMG00000012092	TRMT61A	72	55.336	Ursus_americanus
ENSCSAVG00000006556	-	86	55.510	ENSUMAG00000024893	TRMT61A	69	55.510	Ursus_maritimus
ENSCSAVG00000006556	-	88	55.336	ENSVVUG00000000754	TRMT61A	87	55.336	Vulpes_vulpes
ENSCSAVG00000006556	-	90	60.311	ENSXETG00000026907	trmt61a	84	60.311	Xenopus_tropicalis
ENSCSAVG00000006556	-	57	56.364	ENSXCOG00000004760	trmt61a	70	56.627	Xiphophorus_couchianus
ENSCSAVG00000006556	-	88	59.289	ENSXMAG00000018447	trmt61a	83	59.289	Xiphophorus_maculatus