EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000006566 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 729 bases
Position: chrreftig_72:2163415-2164143
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011223	PARP	PF00644.20	1.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011354	-	459	-	ENSCSAVP00000011223	153 (aa)	-	H2Z0W1

Gene Model

Click here to download ENSCSAVG00000006566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000006566	-	100	48.366	ENSCSAVG00000004787	-	91	48.366
ENSCSAVG00000006566	-	100	88.235	ENSCSAVG00000006569	-	99	88.235
ENSCSAVG00000006566	-	100	45.223	ENSCSAVG00000007132	-	100	45.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006566	-	100	45.223	ENSCING00000015928	-	63	45.223	Ciona_intestinalis
ENSCSAVG00000006566	-	85	70.769	ENSCING00000023401	-	98	70.769	Ciona_intestinalis
ENSCSAVG00000006566	-	77	47.934	ENSLACG00000000311	-	97	47.934	Latimeria_chalumnae