EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000006572 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1395 bases
Position: chrreftig_19:651241-652635
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011230	RRM_1	PF00076.22	1.2e-38	1	2
ENSCSAVP00000011230	RRM_1	PF00076.22	1.2e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011361	-	1395	-	ENSCSAVP00000011230	465 (aa)	-	H2Z0W8

Gene Model

Click here to download ENSCSAVG00000006572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000006572	-	68	31.068	ENSCSAVG00000004765	-	88	31.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006572	-	82	45.802	WBGene00021921	Y55F3AM.3	83	46.113	Caenorhabditis_elegans
ENSCSAVG00000006572	-	99	86.853	ENSCING00000020692	-	79	90.489	Ciona_intestinalis
ENSCSAVG00000006572	-	81	55.990	FBgn0031883	Caper	59	56.906	Drosophila_melanogaster