EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000006627 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
2553 bases
Position
chrreftig_13:1358446-1360998
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000011324SYF2PF08231.128e-4511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000011457-1070-ENSCSAVP00000011324219 (aa)-H2Z162
Gene Model
Click here to download ENSCSAVG00000006627's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006627's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000006627-9751.174ENSG00000117614SYF29646.392Homo_sapiens
ENSCSAVG00000006627-9751.643ENSAPOG00000001174syf28951.643Acanthochromis_polyacanthus
ENSCSAVG00000006627-9052.284ENSAMEG00000010134-10052.284Ailuropoda_melanoleuca
ENSCSAVG00000006627-9751.174ENSAMEG00000010115-8751.174Ailuropoda_melanoleuca
ENSCSAVG00000006627-9751.643ENSACIG00000023688syf28451.643Amphilophus_citrinellus
ENSCSAVG00000006627-9751.174ENSAOCG00000022046syf29051.174Amphiprion_ocellaris
ENSCSAVG00000006627-8947.959ENSAOCG00000010912syf26047.959Amphiprion_ocellaris
ENSCSAVG00000006627-9751.174ENSAPEG00000018858syf28151.174Amphiprion_percula
ENSCSAVG00000006627-9752.113ENSATEG00000007745syf28952.113Anabas_testudineus
ENSCSAVG00000006627-9253.465ENSAPLG00000016435SYF29953.465Anas_platyrhynchos
ENSCSAVG00000006627-9252.475ENSACAG00000013653-9852.475Anolis_carolinensis
ENSCSAVG00000006627-7447.561ENSACAG00000026777-9647.561Anolis_carolinensis
ENSCSAVG00000006627-9751.174ENSANAG00000032473SYF28751.174Aotus_nancymaae
ENSCSAVG00000006627-9752.113ENSACLG00000019916syf28952.113Astatotilapia_calliptera
ENSCSAVG00000006627-9848.598ENSAMXG00000004051syf28948.598Astyanax_mexicanus
ENSCSAVG00000006627-9751.643ENSBTAG00000001651SYF28951.643Bos_taurus
ENSCSAVG00000006627-9639.810WBGene00019402syf-29039.810Caenorhabditis_elegans
ENSCSAVG00000006627-9751.174ENSCJAG00000046570SYF28751.174Callithrix_jacchus
ENSCSAVG00000006627-9648.585ENSCAFG00000030331-9148.585Canis_familiaris
ENSCSAVG00000006627-9751.174ENSCAFG00000012895-8651.174Canis_familiaris
ENSCSAVG00000006627-7352.500ENSCAFG00020021094-8452.500Canis_lupus_dingo
ENSCSAVG00000006627-9751.174ENSCAFG00020021091-8651.174Canis_lupus_dingo
ENSCSAVG00000006627-9751.643ENSCHIG00000020874SYF28851.643Capra_hircus
ENSCSAVG00000006627-9750.704ENSTSYG00000005114SYF28750.704Carlito_syrichta
ENSCSAVG00000006627-9152.000ENSCAPG00000010006SYF210052.000Cavia_aperea
ENSCSAVG00000006627-9751.174ENSCPOG00000005326SYF28651.174Cavia_porcellus
ENSCSAVG00000006627-9751.174ENSCCAG00000022459SYF28751.174Cebus_capucinus
ENSCSAVG00000006627-9751.174ENSCATG00000026917SYF29646.392Cercocebus_atys
ENSCSAVG00000006627-9751.174ENSCLAG00000008474SYF28651.174Chinchilla_lanigera
ENSCSAVG00000006627-9751.174ENSCSAG00000000948SYF28751.174Chlorocebus_sabaeus
ENSCSAVG00000006627-5846.825ENSCHOG00000005273-7646.825Choloepus_hoffmanni
ENSCSAVG00000006627-9851.402ENSCPBG00000025073SYF28551.402Chrysemys_picta_bellii
ENSCSAVG00000006627-10080.365ENSCING00000003017-9180.365Ciona_intestinalis
ENSCSAVG00000006627-9744.601ENSCANG00000037322SYF29539.175Colobus_angolensis_palliatus
ENSCSAVG00000006627-9750.235ENSCGRG00001020733Syf28750.235Cricetulus_griseus_chok1gshd
ENSCSAVG00000006627-9051.515ENSCGRG00000005095Syf29651.244Cricetulus_griseus_crigri
ENSCSAVG00000006627-9750.704ENSCSEG00000000117syf28850.704Cynoglossus_semilaevis
ENSCSAVG00000006627-9851.402ENSCVAG00000019543syf28951.402Cyprinodon_variegatus
ENSCSAVG00000006627-9850.467ENSDARG00000004706syf28950.467Danio_rerio
ENSCSAVG00000006627-9750.235ENSDNOG00000047605SYF28650.235Dasypus_novemcinctus
ENSCSAVG00000006627-9751.174ENSDORG00000001274Syf28651.174Dipodomys_ordii
ENSCSAVG00000006627-9650.237FBgn0033556CG123439350.237Drosophila_melanogaster
ENSCSAVG00000006627-9141.000ENSETEG00000015729SYF28641.000Echinops_telfairi
ENSCSAVG00000006627-9443.269ENSEBUG00000015402syf210044.019Eptatretus_burgeri
ENSCSAVG00000006627-9751.174ENSEASG00005004224-8651.174Equus_asinus_asinus
ENSCSAVG00000006627-9746.544ENSEASG00005004232-8746.544Equus_asinus_asinus
ENSCSAVG00000006627-9751.174ENSECAG00000012023-8651.174Equus_caballus
ENSCSAVG00000006627-9751.174ENSECAG00000010440-8851.174Equus_caballus
ENSCSAVG00000006627-6942.763ENSEEUG00000015084SYF28242.763Erinaceus_europaeus
ENSCSAVG00000006627-9850.000ENSELUG00000003465syf28950.000Esox_lucius
ENSCSAVG00000006627-9751.643ENSFCAG00000010324-7351.643Felis_catus
ENSCSAVG00000006627-9750.704ENSFCAG00000043095-9047.568Felis_catus
ENSCSAVG00000006627-9452.427ENSFALG00000000460SYF28651.869Ficedula_albicollis
ENSCSAVG00000006627-9750.704ENSFDAG00000008310SYF28750.704Fukomys_damarensis
ENSCSAVG00000006627-7352.830ENSFHEG00000007238syf27052.830Fundulus_heteroclitus
ENSCSAVG00000006627-9751.174ENSGMOG00000019138syf29451.174Gadus_morhua
ENSCSAVG00000006627-9851.869ENSGALG00000013639SYF28451.869Gallus_gallus
ENSCSAVG00000006627-9850.467ENSGAFG00000019435syf28950.467Gambusia_affinis
ENSCSAVG00000006627-9749.296ENSGACG00000007305syf28849.296Gasterosteus_aculeatus
ENSCSAVG00000006627-9851.869ENSGAGG00000010670SYF28551.869Gopherus_agassizii
ENSCSAVG00000006627-9751.174ENSGGOG00000012796SYF29646.392Gorilla_gorilla
ENSCSAVG00000006627-9752.113ENSHBUG00000020477syf29152.113Haplochromis_burtoni
ENSCSAVG00000006627-9751.174ENSHGLG00000014393SYF28651.174Heterocephalus_glaber_female
ENSCSAVG00000006627-9747.418ENSHGLG00000004304-8847.418Heterocephalus_glaber_female
ENSCSAVG00000006627-9751.174ENSHGLG00100014722SYF28651.174Heterocephalus_glaber_male
ENSCSAVG00000006627-9850.000ENSHCOG00000012904syf26950.000Hippocampus_comes
ENSCSAVG00000006627-9850.000ENSIPUG00000019859syf28950.000Ictalurus_punctatus
ENSCSAVG00000006627-6648.611ENSSTOG00000023984SYF29748.611Ictidomys_tridecemlineatus
ENSCSAVG00000006627-9251.741ENSJJAG00000013301Syf29451.741Jaculus_jaculus
ENSCSAVG00000006627-9750.704ENSKMAG00000013856syf28950.704Kryptolebias_marmoratus
ENSCSAVG00000006627-9850.935ENSLBEG00000014425syf28950.935Labrus_bergylta
ENSCSAVG00000006627-9850.935ENSLACG00000012064SYF28950.935Latimeria_chalumnae
ENSCSAVG00000006627-9850.935ENSLOCG00000002728syf28450.935Lepisosteus_oculatus
ENSCSAVG00000006627-8438.095ENSLAFG00000030814-10038.095Loxodonta_africana
ENSCSAVG00000006627-9750.704ENSLAFG00000023150-8650.704Loxodonta_africana
ENSCSAVG00000006627-9751.174ENSMFAG00000041831SYF29646.392Macaca_fascicularis
ENSCSAVG00000006627-9751.174ENSMMUG00000002968SYF29646.392Macaca_mulatta
ENSCSAVG00000006627-9751.174ENSMNEG00000030180SYF29646.392Macaca_nemestrina
ENSCSAVG00000006627-9751.174ENSMLEG00000030248SYF29646.392Mandrillus_leucophaeus
ENSCSAVG00000006627-9749.765ENSMAMG00000010403syf28849.765Mastacembelus_armatus
ENSCSAVG00000006627-9752.113ENSMZEG00005006429syf28952.113Maylandia_zebra
ENSCSAVG00000006627-9253.234ENSMGAG00000002019SYF210053.234Meleagris_gallopavo
ENSCSAVG00000006627-9750.235ENSMAUG00000018974Syf28750.235Mesocricetus_auratus
ENSCSAVG00000006627-9252.736ENSMICG00000016191SYF210052.736Microcebus_murinus
ENSCSAVG00000006627-9750.235ENSMOCG00000022938Syf28750.235Microtus_ochrogaster
ENSCSAVG00000006627-9749.765ENSMMOG00000002396syf28849.765Mola_mola
ENSCSAVG00000006627-9849.537ENSMODG00000013951-9349.537Monodelphis_domestica
ENSCSAVG00000006627-9750.704ENSMALG00000010706syf28850.704Monopterus_albus
ENSCSAVG00000006627-9750.704MGP_CAROLIEiJ_G0026633Syf28750.704Mus_caroli
ENSCSAVG00000006627-9750.704ENSMUSG00000028821Syf28750.704Mus_musculus
ENSCSAVG00000006627-9750.704MGP_PahariEiJ_G0028966Syf28750.704Mus_pahari
ENSCSAVG00000006627-9750.704MGP_SPRETEiJ_G0027613Syf28750.704Mus_spretus
ENSCSAVG00000006627-9751.643ENSMPUG00000015801-8651.643Mustela_putorius_furo
ENSCSAVG00000006627-9751.174ENSMPUG00000015802-8651.174Mustela_putorius_furo
ENSCSAVG00000006627-9751.174ENSMLUG00000001885SYF28651.174Myotis_lucifugus
ENSCSAVG00000006627-9750.704ENSNGAG00000007912Syf28650.704Nannospalax_galili
ENSCSAVG00000006627-10045.205ENSNBRG00000010720syf29345.205Neolamprologus_brichardi
ENSCSAVG00000006627-9751.174ENSNLEG00000035185SYF29646.392Nomascus_leucogenys
ENSCSAVG00000006627-9750.704ENSOPRG00000012870SYF28750.704Ochotona_princeps
ENSCSAVG00000006627-9750.704ENSODEG00000017664-8950.233Octodon_degus
ENSCSAVG00000006627-9747.418ENSODEG00000014338-8747.418Octodon_degus
ENSCSAVG00000006627-9751.643ENSONIG00000008213syf28951.643Oreochromis_niloticus
ENSCSAVG00000006627-9354.187ENSOANG00000009552SYF29954.187Ornithorhynchus_anatinus
ENSCSAVG00000006627-9751.174ENSOCUG00000013050SYF28651.174Oryctolagus_cuniculus
ENSCSAVG00000006627-9751.174ENSORLG00000028820syf29151.174Oryzias_latipes
ENSCSAVG00000006627-9751.174ENSORLG00020018333syf28951.174Oryzias_latipes_hni
ENSCSAVG00000006627-9751.174ENSORLG00015014665syf28951.174Oryzias_latipes_hsok
ENSCSAVG00000006627-9751.643ENSOMEG00000013911syf28951.643Oryzias_melastigma
ENSCSAVG00000006627-9751.174ENSOGAG00000009962SYF28651.174Otolemur_garnettii
ENSCSAVG00000006627-9751.163ENSOARG00000006348-8651.163Ovis_aries
ENSCSAVG00000006627-9039.086ENSOARG00000006269-10039.086Ovis_aries
ENSCSAVG00000006627-9751.174ENSPPAG00000036579SYF29646.392Pan_paniscus
ENSCSAVG00000006627-9750.704ENSPPRG00000001651-9047.568Panthera_pardus
ENSCSAVG00000006627-9751.643ENSPPRG00000001638-8651.643Panthera_pardus
ENSCSAVG00000006627-9751.643ENSPTIG00000005711-7751.643Panthera_tigris_altaica
ENSCSAVG00000006627-9750.704ENSPTIG00000007036-9047.568Panthera_tigris_altaica
ENSCSAVG00000006627-9751.174ENSPTRG00000000352SYF29646.392Pan_troglodytes
ENSCSAVG00000006627-9751.174ENSPANG00000008139SYF29646.392Papio_anubis
ENSCSAVG00000006627-9849.065ENSPKIG00000008130syf29049.065Paramormyrops_kingsleyae
ENSCSAVG00000006627-9853.271ENSPSIG00000011816SYF28253.271Pelodiscus_sinensis
ENSCSAVG00000006627-9852.336ENSPMGG00000008755syf28352.336Periophthalmus_magnuspinnatus
ENSCSAVG00000006627-9749.765ENSPEMG00000008283Syf28751.163Peromyscus_maniculatus_bairdii
ENSCSAVG00000006627-9851.869ENSPCIG00000014235SYF28551.869Phascolarctos_cinereus
ENSCSAVG00000006627-9850.935ENSPFOG00000004116syf28850.935Poecilia_formosa
ENSCSAVG00000006627-9850.935ENSPLAG00000006691syf29150.935Poecilia_latipinna
ENSCSAVG00000006627-9849.533ENSPMEG00000011684syf29149.533Poecilia_mexicana
ENSCSAVG00000006627-9850.935ENSPREG00000003009syf28950.935Poecilia_reticulata
ENSCSAVG00000006627-9751.174ENSPPYG00000001713SYF28751.174Pongo_abelii
ENSCSAVG00000006627-8840.102ENSPCOG00000027011SYF29640.102Propithecus_coquereli
ENSCSAVG00000006627-9746.009ENSPVAG00000005841SYF28646.009Pteropus_vampyrus
ENSCSAVG00000006627-9752.113ENSPNYG00000004979syf28952.113Pundamilia_nyererei
ENSCSAVG00000006627-9850.000ENSPNAG00000015570syf28950.000Pygocentrus_nattereri
ENSCSAVG00000006627-9750.704ENSRNOG00000060597Syf28750.704Rattus_norvegicus
ENSCSAVG00000006627-9749.765ENSRBIG00000042970SYF29644.845Rhinopithecus_bieti
ENSCSAVG00000006627-9751.174ENSRROG00000001347SYF29646.392Rhinopithecus_roxellana
ENSCSAVG00000006627-9751.174ENSSBOG00000020184SYF28751.174Saimiri_boliviensis_boliviensis
ENSCSAVG00000006627-9851.869ENSSHAG00000015630-8551.869Sarcophilus_harrisii
ENSCSAVG00000006627-9353.431ENSSHAG00000007152-9853.431Sarcophilus_harrisii
ENSCSAVG00000006627-9850.467ENSSFOG00015023647syf28950.467Scleropages_formosus
ENSCSAVG00000006627-9750.235ENSSMAG00000009867syf28950.235Scophthalmus_maximus
ENSCSAVG00000006627-9751.174ENSSDUG00000013072syf28951.174Seriola_dumerili
ENSCSAVG00000006627-9751.174ENSSLDG00000012677syf28951.174Seriola_lalandi_dorsalis
ENSCSAVG00000006627-7353.459ENSSARG00000012889SYF26453.459Sorex_araneus
ENSCSAVG00000006627-9850.935ENSSPUG00000005251SYF28450.935Sphenodon_punctatus
ENSCSAVG00000006627-9749.765ENSSPAG00000009626syf28949.765Stegastes_partitus
ENSCSAVG00000006627-9751.643ENSSSCG00000037481SYF28651.643Sus_scrofa
ENSCSAVG00000006627-9751.174ENSTRUG00000001499syf28551.174Takifugu_rubripes
ENSCSAVG00000006627-9749.765ENSTNIG00000016912syf29549.765Tetraodon_nigroviridis
ENSCSAVG00000006627-9739.906ENSTBEG00000017370SYF28439.906Tupaia_belangeri
ENSCSAVG00000006627-9751.643ENSTTRG00000003550SYF28651.643Tursiops_truncatus
ENSCSAVG00000006627-9750.704ENSUAMG00000002897SYF28650.704Ursus_americanus
ENSCSAVG00000006627-9750.704ENSUMAG00000013108SYF28650.704Ursus_maritimus
ENSCSAVG00000006627-9752.113ENSVPAG00000005705SYF28652.113Vicugna_pacos
ENSCSAVG00000006627-9751.174ENSVVUG00000027175-8651.174Vulpes_vulpes
ENSCSAVG00000006627-9451.456ENSVVUG00000027181-8550.704Vulpes_vulpes
ENSCSAVG00000006627-9750.704ENSXETG00000022797syf28550.704Xenopus_tropicalis
ENSCSAVG00000006627-9850.000ENSXMAG00000022698syf28950.000Xiphophorus_maculatus

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