EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006653 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 16355 bases
Position: chrreftig_77:2352151-2368505
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011375	BOP1NT	PF08145.12	1.1e-107	1	1
ENSCSAVP00000011378	BOP1NT	PF08145.12	1.7e-107	1	1
ENSCSAVP00000011377	BOP1NT	PF08145.12	2e-107	1	1
ENSCSAVP00000011376	BOP1NT	PF08145.12	2.1e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011510	-	1987	-	ENSCSAVP00000011377	637 (aa)	-	H2Z1B5
ENSCSAVT00000011511	-	1755	-	ENSCSAVP00000011378	584 (aa)	-	H2Z1B6
ENSCSAVT00000011509	-	2016	-	ENSCSAVP00000011376	639 (aa)	-	H2Z1B4
ENSCSAVT00000011508	-	2236	-	ENSCSAVP00000011375	626 (aa)	-	H2Z1B3

Gene Model

Click here to download ENSCSAVG00000006653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006653	-	99	59.746	ENSG00000261236	BOP1	83	59.746	Homo_sapiens
ENSCSAVG00000006653	-	100	62.205	ENSAPOG00000019208	bop1	94	61.164	Acanthochromis_polyacanthus
ENSCSAVG00000006653	-	99	57.211	ENSAMEG00000005886	BOP1	88	57.211	Ailuropoda_melanoleuca
ENSCSAVG00000006653	-	99	60.731	ENSACIG00000007313	bop1	88	60.000	Amphilophus_citrinellus
ENSCSAVG00000006653	-	100	61.417	ENSAOCG00000016222	bop1	84	60.787	Amphiprion_ocellaris
ENSCSAVG00000006653	-	100	61.260	ENSAPEG00000018843	bop1	84	60.630	Amphiprion_percula
ENSCSAVG00000006653	-	100	61.321	ENSATEG00000010331	bop1	90	58.665	Anabas_testudineus
ENSCSAVG00000006653	-	91	58.152	ENSAPLG00000008324	BOP1	100	57.417	Anas_platyrhynchos
ENSCSAVG00000006653	-	99	59.588	ENSANAG00000035474	BOP1	84	59.968	Aotus_nancymaae
ENSCSAVG00000006653	-	100	60.597	ENSACLG00000005923	bop1	97	60.597	Astatotilapia_calliptera
ENSCSAVG00000006653	-	91	57.465	ENSAMXG00000011549	bop1	87	57.465	Astyanax_mexicanus
ENSCSAVG00000006653	-	99	60.063	ENSBTAG00000009811	BOP1	83	59.905	Bos_taurus
ENSCSAVG00000006653	-	100	44.921	WBGene00012978	Y48B6A.1	93	44.921	Caenorhabditis_elegans
ENSCSAVG00000006653	-	94	58.319	ENSCJAG00000021437	BOP1	74	58.319	Callithrix_jacchus
ENSCSAVG00000006653	-	99	55.151	ENSCAFG00000001554	BOP1	83	55.151	Canis_familiaris
ENSCSAVG00000006653	-	99	54.992	ENSCHIG00000013489	BOP1	83	54.834	Capra_hircus
ENSCSAVG00000006653	-	99	60.063	ENSTSYG00000035588	BOP1	84	60.063	Carlito_syrichta
ENSCSAVG00000006653	-	100	58.452	ENSCAPG00000005636	BOP1	96	58.720	Cavia_aperea
ENSCSAVG00000006653	-	99	58.954	ENSCPOG00000005456	BOP1	85	58.954	Cavia_porcellus
ENSCSAVG00000006653	-	99	60.539	ENSCCAG00000028318	BOP1	84	60.285	Cebus_capucinus
ENSCSAVG00000006653	-	99	59.464	ENSCATG00000032450	BOP1	83	59.588	Cercocebus_atys
ENSCSAVG00000006653	-	99	58.796	ENSCLAG00000010297	BOP1	85	58.796	Chinchilla_lanigera
ENSCSAVG00000006653	-	99	59.464	ENSCSAG00000008653	BOP1	83	59.588	Chlorocebus_sabaeus
ENSCSAVG00000006653	-	100	61.102	ENSCPBG00000018884	BOP1	85	60.979	Chrysemys_picta_bellii
ENSCSAVG00000006653	-	100	81.720	ENSCING00000006069	-	87	81.720	Ciona_intestinalis
ENSCSAVG00000006653	-	99	59.306	ENSCANG00000038730	BOP1	85	59.113	Colobus_angolensis_palliatus
ENSCSAVG00000006653	-	100	57.997	ENSCGRG00001022601	BOP1	85	59.242	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006653	-	100	57.997	ENSCGRG00000012159	Bop1	85	59.242	Cricetulus_griseus_crigri
ENSCSAVG00000006653	-	99	60.510	ENSCSEG00000018121	bop1	94	55.689	Cynoglossus_semilaevis
ENSCSAVG00000006653	-	100	61.006	ENSCVAG00000023063	bop1	82	60.535	Cyprinodon_variegatus
ENSCSAVG00000006653	-	100	62.776	ENSDARG00000063627	bop1	80	62.776	Danio_rerio
ENSCSAVG00000006653	-	100	59.084	ENSDNOG00000047347	BOP1	83	58.768	Dasypus_novemcinctus
ENSCSAVG00000006653	-	99	58.637	ENSDORG00000004860	Bop1	90	58.320	Dipodomys_ordii
ENSCSAVG00000006653	-	100	49.844	FBgn0028744	CG5033	81	49.377	Drosophila_melanogaster
ENSCSAVG00000006653	-	99	56.320	ENSEBUG00000003348	bop1	96	56.160	Eptatretus_burgeri
ENSCSAVG00000006653	-	99	59.905	ENSEASG00005010217	BOP1	84	59.905	Equus_asinus_asinus
ENSCSAVG00000006653	-	99	60.063	ENSECAG00000016440	BOP1	75	60.063	Equus_caballus
ENSCSAVG00000006653	-	81	56.395	ENSEEUG00000005437	BOP1	96	56.395	Erinaceus_europaeus
ENSCSAVG00000006653	-	100	62.934	ENSELUG00000022099	bop1	79	62.461	Esox_lucius
ENSCSAVG00000006653	-	99	58.479	ENSFCAG00000022942	BOP1	84	58.479	Felis_catus
ENSCSAVG00000006653	-	91	53.534	ENSFALG00000000360	BOP1	100	54.419	Ficedula_albicollis
ENSCSAVG00000006653	-	99	58.796	ENSFDAG00000015755	BOP1	88	58.796	Fukomys_damarensis
ENSCSAVG00000006653	-	84	59.555	ENSFHEG00000017233	bop1	88	59.555	Fundulus_heteroclitus
ENSCSAVG00000006653	-	99	55.024	ENSGMOG00000000569	bop1	100	53.616	Gadus_morhua
ENSCSAVG00000006653	-	100	60.420	ENSGALG00000053353	BOP1	88	61.295	Gallus_gallus
ENSCSAVG00000006653	-	100	61.321	ENSGAFG00000011248	bop1	87	60.890	Gambusia_affinis
ENSCSAVG00000006653	-	99	61.068	ENSGACG00000010420	bop1	94	60.692	Gasterosteus_aculeatus
ENSCSAVG00000006653	-	100	60.345	ENSGAGG00000012770	BOP1	85	60.506	Gopherus_agassizii
ENSCSAVG00000006653	-	99	59.621	ENSGGOG00000013590	BOP1	87	59.746	Gorilla_gorilla
ENSCSAVG00000006653	-	100	60.911	ENSHBUG00000013186	bop1	87	60.911	Haplochromis_burtoni
ENSCSAVG00000006653	-	99	58.796	ENSHGLG00000017934	BOP1	85	58.796	Heterocephalus_glaber_female
ENSCSAVG00000006653	-	99	58.796	ENSHGLG00100007897	BOP1	91	58.796	Heterocephalus_glaber_male
ENSCSAVG00000006653	-	100	60.312	ENSHCOG00000018713	bop1	85	60.377	Hippocampus_comes
ENSCSAVG00000006653	-	100	61.830	ENSIPUG00000012277	bop1	81	61.830	Ictalurus_punctatus
ENSCSAVG00000006653	-	99	58.833	ENSSTOG00000020925	BOP1	84	58.796	Ictidomys_tridecemlineatus
ENSCSAVG00000006653	-	100	57.674	ENSJJAG00000003954	Bop1	88	58.926	Jaculus_jaculus
ENSCSAVG00000006653	-	99	61.890	ENSKMAG00000001743	bop1	92	61.049	Kryptolebias_marmoratus
ENSCSAVG00000006653	-	99	60.945	ENSLBEG00000022444	bop1	82	60.630	Labrus_bergylta
ENSCSAVG00000006653	-	99	60.945	ENSLBEG00000023751	-	82	60.630	Labrus_bergylta
ENSCSAVG00000006653	-	100	64.297	ENSLACG00000013738	BOP1	82	64.297	Latimeria_chalumnae
ENSCSAVG00000006653	-	99	63.840	ENSLOCG00000007429	bop1	100	63.840	Lepisosteus_oculatus
ENSCSAVG00000006653	-	99	54.818	ENSLAFG00000000686	BOP1	91	55.521	Loxodonta_africana
ENSCSAVG00000006653	-	99	59.306	ENSMFAG00000031321	BOP1	86	59.429	Macaca_fascicularis
ENSCSAVG00000006653	-	99	59.306	ENSMMUG00000014724	BOP1	83	59.429	Macaca_mulatta
ENSCSAVG00000006653	-	99	49.371	ENSMNEG00000040269	BOP1	82	48.980	Macaca_nemestrina
ENSCSAVG00000006653	-	99	59.464	ENSMLEG00000039202	BOP1	87	59.588	Mandrillus_leucophaeus
ENSCSAVG00000006653	-	100	61.006	ENSMAMG00000022191	bop1	87	60.413	Mastacembelus_armatus
ENSCSAVG00000006653	-	100	60.754	ENSMZEG00005011990	bop1	88	60.754	Maylandia_zebra
ENSCSAVG00000006653	-	98	55.776	ENSMAUG00000012534	Bop1	88	56.082	Mesocricetus_auratus
ENSCSAVG00000006653	-	99	60.063	ENSMICG00000015653	BOP1	84	59.905	Microcebus_murinus
ENSCSAVG00000006653	-	100	58.320	ENSMOCG00000011668	Bop1	86	59.558	Microtus_ochrogaster
ENSCSAVG00000006653	-	100	60.522	ENSMMOG00000017547	bop1	88	59.618	Mola_mola
ENSCSAVG00000006653	-	99	57.845	ENSMODG00000010589	BOP1	76	57.845	Monodelphis_domestica
ENSCSAVG00000006653	-	99	61.890	ENSMALG00000011552	bop1	81	61.575	Monopterus_albus
ENSCSAVG00000006653	-	100	57.027	MGP_CAROLIEiJ_G0019928	Bop1	85	58.294	Mus_caroli
ENSCSAVG00000006653	-	100	57.027	ENSMUSG00000022557	Bop1	85	58.294	Mus_musculus
ENSCSAVG00000006653	-	100	57.512	MGP_PahariEiJ_G0019938	Bop1	85	58.768	Mus_pahari
ENSCSAVG00000006653	-	100	56.866	MGP_SPRETEiJ_G0020831	Bop1	97	64.844	Mus_spretus
ENSCSAVG00000006653	-	99	60.063	ENSMPUG00000006831	BOP1	85	59.905	Mustela_putorius_furo
ENSCSAVG00000006653	-	99	60.063	ENSMLUG00000030120	BOP1	88	60.063	Myotis_lucifugus
ENSCSAVG00000006653	-	99	59.265	ENSNGAG00000009053	Bop1	98	59.265	Nannospalax_galili
ENSCSAVG00000006653	-	99	57.052	ENSNBRG00000021004	bop1	88	57.052	Neolamprologus_brichardi
ENSCSAVG00000006653	-	99	57.760	ENSMEUG00000000450	BOP1	82	57.760	Notamacropus_eugenii
ENSCSAVG00000006653	-	54	61.224	ENSOPRG00000011373	-	74	60.784	Ochotona_princeps
ENSCSAVG00000006653	-	99	58.954	ENSODEG00000013361	BOP1	86	58.637	Octodon_degus
ENSCSAVG00000006653	-	100	61.068	ENSONIG00000015336	bop1	87	61.068	Oreochromis_niloticus
ENSCSAVG00000006653	-	100	61.792	ENSORLG00000001674	bop1	84	61.478	Oryzias_latipes
ENSCSAVG00000006653	-	100	61.792	ENSORLG00020010315	bop1	84	61.478	Oryzias_latipes_hni
ENSCSAVG00000006653	-	100	61.950	ENSORLG00015017381	bop1	84	61.635	Oryzias_latipes_hsok
ENSCSAVG00000006653	-	100	61.950	ENSOMEG00000009341	bop1	84	61.635	Oryzias_melastigma
ENSCSAVG00000006653	-	99	58.796	ENSOGAG00000017175	BOP1	85	58.796	Otolemur_garnettii
ENSCSAVG00000006653	-	79	63.910	ENSOARG00000014255	BOP1	77	62.411	Ovis_aries
ENSCSAVG00000006653	-	99	59.621	ENSPPAG00000043028	BOP1	87	59.746	Pan_paniscus
ENSCSAVG00000006653	-	86	59.316	ENSPPRG00000008442	BOP1	81	60.618	Panthera_pardus
ENSCSAVG00000006653	-	99	59.621	ENSPTRG00000020690	BOP1	83	59.746	Pan_troglodytes
ENSCSAVG00000006653	-	99	59.464	ENSPANG00000024950	BOP1	83	59.588	Papio_anubis
ENSCSAVG00000006653	-	100	62.401	ENSPKIG00000020273	bop1	74	62.401	Paramormyrops_kingsleyae
ENSCSAVG00000006653	-	99	59.618	ENSPMGG00000023998	bop1	90	59.236	Periophthalmus_magnuspinnatus
ENSCSAVG00000006653	-	99	61.342	ENSPMAG00000004108	bop1	100	61.465	Petromyzon_marinus
ENSCSAVG00000006653	-	99	58.796	ENSPCIG00000009070	BOP1	82	58.796	Phascolarctos_cinereus
ENSCSAVG00000006653	-	100	61.164	ENSPFOG00000007988	bop1	83	60.849	Poecilia_formosa
ENSCSAVG00000006653	-	99	60.669	ENSPLAG00000006820	bop1	85	60.572	Poecilia_latipinna
ENSCSAVG00000006653	-	99	60.828	ENSPMEG00000015671	bop1	83	60.731	Poecilia_mexicana
ENSCSAVG00000006653	-	100	61.538	ENSPREG00000015440	bop1	85	60.597	Poecilia_reticulata
ENSCSAVG00000006653	-	90	58.172	ENSPPYG00000029621	-	98	58.348	Pongo_abelii
ENSCSAVG00000006653	-	99	57.845	ENSPCAG00000006873	BOP1	84	57.845	Procavia_capensis
ENSCSAVG00000006653	-	99	59.746	ENSPCOG00000023196	BOP1	84	59.746	Propithecus_coquereli
ENSCSAVG00000006653	-	99	60.572	ENSPNYG00000010914	bop1	91	60.572	Pundamilia_nyererei
ENSCSAVG00000006653	-	100	61.199	ENSPNAG00000008525	bop1	78	61.199	Pygocentrus_nattereri
ENSCSAVG00000006653	-	100	57.997	ENSRNOG00000021773	Bop1	85	59.242	Rattus_norvegicus
ENSCSAVG00000006653	-	99	59.148	ENSRBIG00000027555	BOP1	83	59.271	Rhinopithecus_bieti
ENSCSAVG00000006653	-	99	54.016	ENSRROG00000043244	BOP1	88	53.701	Rhinopithecus_roxellana
ENSCSAVG00000006653	-	100	43.091	YMR049C	-	82	43.070	Saccharomyces_cerevisiae
ENSCSAVG00000006653	-	99	60.380	ENSSBOG00000030140	BOP1	82	60.063	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006653	-	99	58.599	ENSSHAG00000000887	BOP1	99	58.599	Sarcophilus_harrisii
ENSCSAVG00000006653	-	99	61.927	ENSSFOG00015010596	bop1	95	61.920	Scleropages_formosus
ENSCSAVG00000006653	-	99	61.950	ENSSMAG00000014623	bop1	83	61.635	Scophthalmus_maximus
ENSCSAVG00000006653	-	100	60.064	ENSSDUG00000021097	bop1	93	60.883	Seriola_dumerili
ENSCSAVG00000006653	-	99	61.732	ENSSLDG00000001209	bop1	95	60.625	Seriola_lalandi_dorsalis
ENSCSAVG00000006653	-	100	56.704	ENSSPUG00000017700	BOP1	94	57.188	Sphenodon_punctatus
ENSCSAVG00000006653	-	99	60.669	ENSSPAG00000013925	bop1	92	60.350	Stegastes_partitus
ENSCSAVG00000006653	-	99	59.464	ENSSSCG00000005920	BOP1	96	59.429	Sus_scrofa
ENSCSAVG00000006653	-	100	61.381	ENSTNIG00000018156	bop1	90	61.538	Tetraodon_nigroviridis
ENSCSAVG00000006653	-	89	60.360	ENSTTRG00000006423	BOP1	88	52.615	Tursiops_truncatus
ENSCSAVG00000006653	-	99	59.105	ENSVVUG00000007851	BOP1	91	59.105	Vulpes_vulpes
ENSCSAVG00000006653	-	100	57.524	ENSXCOG00000019431	bop1	89	57.210	Xiphophorus_couchianus