EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006671 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2771 bases
Position: chrreftig_65:957903-960673
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011406	Ribosomal_S10	PF00338.22	9.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011539	-	803	-	ENSCSAVP00000011406	209 (aa)	-	H2Z1E4

Gene Model

Click here to download ENSCSAVG00000006671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006671's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006671	-	85	33.333	ENSG00000175581	MRPL48	99	34.167	Homo_sapiens
ENSCSAVG00000006671	-	82	35.465	ENSAPOG00000013955	mrpl48	77	35.465	Acanthochromis_polyacanthus
ENSCSAVG00000006671	-	89	32.804	ENSAMEG00000017282	MRPL48	84	32.804	Ailuropoda_melanoleuca
ENSCSAVG00000006671	-	90	32.804	ENSACIG00000009743	mrpl48	93	33.333	Amphilophus_citrinellus
ENSCSAVG00000006671	-	88	34.896	ENSAOCG00000004158	mrpl48	86	34.896	Amphiprion_ocellaris
ENSCSAVG00000006671	-	88	34.896	ENSAPEG00000024029	mrpl48	86	34.896	Amphiprion_percula
ENSCSAVG00000006671	-	97	31.429	ENSATEG00000012425	mrpl48	95	32.381	Anabas_testudineus
ENSCSAVG00000006671	-	89	32.447	ENSAPLG00000008046	MRPL48	85	32.447	Anas_platyrhynchos
ENSCSAVG00000006671	-	72	33.333	ENSACAG00000006382	MRPL48	69	33.333	Anolis_carolinensis
ENSCSAVG00000006671	-	86	33.333	ENSANAG00000036546	MRPL48	80	33.333	Aotus_nancymaae
ENSCSAVG00000006671	-	82	33.721	ENSACLG00000024077	mrpl48	77	33.721	Astatotilapia_calliptera
ENSCSAVG00000006671	-	80	32.335	ENSAMXG00000006784	mrpl48	82	32.515	Astyanax_mexicanus
ENSCSAVG00000006671	-	87	34.973	ENSBTAG00000008347	MRPL48	81	34.973	Bos_taurus
ENSCSAVG00000006671	-	86	32.778	ENSCJAG00000015867	MRPL48	80	32.778	Callithrix_jacchus
ENSCSAVG00000006671	-	86	35.359	ENSCAFG00000005585	-	96	35.359	Canis_familiaris
ENSCSAVG00000006671	-	88	33.155	ENSCAFG00000008462	-	83	33.155	Canis_familiaris
ENSCSAVG00000006671	-	58	30.952	ENSCAFG00020002202	-	62	30.000	Canis_lupus_dingo
ENSCSAVG00000006671	-	89	32.632	ENSCHIG00000013981	MRPL48	84	34.211	Capra_hircus
ENSCSAVG00000006671	-	89	32.979	ENSTSYG00000012895	MRPL48	83	32.979	Carlito_syrichta
ENSCSAVG00000006671	-	89	31.915	ENSCPOG00000013291	MRPL48	83	31.915	Cavia_porcellus
ENSCSAVG00000006671	-	86	30.000	ENSCCAG00000037377	-	77	30.000	Cebus_capucinus
ENSCSAVG00000006671	-	86	32.222	ENSCCAG00000024861	-	80	32.222	Cebus_capucinus
ENSCSAVG00000006671	-	85	33.146	ENSCATG00000008832	MRPL48	79	33.146	Cercocebus_atys
ENSCSAVG00000006671	-	89	32.447	ENSCLAG00000014653	MRPL48	83	32.447	Chinchilla_lanigera
ENSCSAVG00000006671	-	86	32.778	ENSCSAG00000004059	MRPL48	80	32.778	Chlorocebus_sabaeus
ENSCSAVG00000006671	-	100	68.421	ENSCING00000013289	-	100	68.421	Ciona_intestinalis
ENSCSAVG00000006671	-	86	32.778	ENSCANG00000030769	MRPL48	80	32.778	Colobus_angolensis_palliatus
ENSCSAVG00000006671	-	89	32.275	ENSCGRG00001021190	Mrpl48	84	32.275	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006671	-	89	32.275	ENSCGRG00000004097	Mrpl48	84	32.275	Cricetulus_griseus_crigri
ENSCSAVG00000006671	-	78	35.976	ENSCSEG00000017376	mrpl48	75	35.976	Cynoglossus_semilaevis
ENSCSAVG00000006671	-	90	33.158	ENSCVAG00000014692	mrpl48	87	33.158	Cyprinodon_variegatus
ENSCSAVG00000006671	-	88	32.821	ENSDARG00000035167	mrpl48	90	32.821	Danio_rerio
ENSCSAVG00000006671	-	85	32.022	ENSDNOG00000002177	MRPL48	95	32.022	Dasypus_novemcinctus
ENSCSAVG00000006671	-	58	33.884	ENSDORG00000000644	-	100	33.884	Dipodomys_ordii
ENSCSAVG00000006671	-	79	32.727	ENSETEG00000009413	MRPL48	61	32.727	Echinops_telfairi
ENSCSAVG00000006671	-	83	32.768	ENSEBUG00000003240	mrpl48	88	32.768	Eptatretus_burgeri
ENSCSAVG00000006671	-	86	32.778	ENSEASG00005017939	MRPL48	87	32.778	Equus_asinus_asinus
ENSCSAVG00000006671	-	89	32.275	ENSECAG00000022115	MRPL48	84	32.275	Equus_caballus
ENSCSAVG00000006671	-	82	34.884	ENSELUG00000008942	mrpl48	78	36.628	Esox_lucius
ENSCSAVG00000006671	-	89	33.333	ENSFCAG00000025668	MRPL48	100	32.231	Felis_catus
ENSCSAVG00000006671	-	89	32.447	ENSFALG00000008015	MRPL48	86	32.447	Ficedula_albicollis
ENSCSAVG00000006671	-	89	31.746	ENSFDAG00000010990	MRPL48	83	31.746	Fukomys_damarensis
ENSCSAVG00000006671	-	85	35.754	ENSFHEG00000020130	mrpl48	80	35.754	Fundulus_heteroclitus
ENSCSAVG00000006671	-	78	31.707	ENSGMOG00000018272	mrpl48	91	31.707	Gadus_morhua
ENSCSAVG00000006671	-	84	33.898	ENSGALG00000017319	MRPL48	78	33.898	Gallus_gallus
ENSCSAVG00000006671	-	82	36.257	ENSGAFG00000004136	mrpl48	77	36.257	Gambusia_affinis
ENSCSAVG00000006671	-	90	32.984	ENSGACG00000018902	mrpl48	89	31.937	Gasterosteus_aculeatus
ENSCSAVG00000006671	-	87	32.065	ENSGAGG00000005045	MRPL48	81	32.065	Gopherus_agassizii
ENSCSAVG00000006671	-	78	33.133	ENSGGOG00000013682	-	76	33.133	Gorilla_gorilla
ENSCSAVG00000006671	-	85	33.333	ENSGGOG00000022915	MRPL48	99	34.167	Gorilla_gorilla
ENSCSAVG00000006671	-	82	33.721	ENSHBUG00000002169	mrpl48	77	33.721	Haplochromis_burtoni
ENSCSAVG00000006671	-	89	33.333	ENSHGLG00000006113	MRPL48	100	33.607	Heterocephalus_glaber_female
ENSCSAVG00000006671	-	89	33.333	ENSHGLG00100014660	MRPL48	83	33.333	Heterocephalus_glaber_male
ENSCSAVG00000006671	-	88	36.170	ENSHCOG00000013282	mrpl48	88	36.170	Hippocampus_comes
ENSCSAVG00000006671	-	88	33.333	ENSIPUG00000021795	Mrpl48	81	32.787	Ictalurus_punctatus
ENSCSAVG00000006671	-	92	33.503	ENSSTOG00000010694	MRPL48	88	33.503	Ictidomys_tridecemlineatus
ENSCSAVG00000006671	-	89	30.890	ENSKMAG00000010818	mrpl48	88	30.890	Kryptolebias_marmoratus
ENSCSAVG00000006671	-	86	31.667	ENSLBEG00000002181	mrpl48	83	31.667	Labrus_bergylta
ENSCSAVG00000006671	-	97	32.178	ENSLOCG00000006190	mrpl48	88	32.673	Lepisosteus_oculatus
ENSCSAVG00000006671	-	86	35.359	ENSLAFG00000003800	MRPL48	95	35.359	Loxodonta_africana
ENSCSAVG00000006671	-	85	33.146	ENSMFAG00000003172	MRPL48	81	33.146	Macaca_fascicularis
ENSCSAVG00000006671	-	85	33.146	ENSMMUG00000014680	MRPL48	83	33.146	Macaca_mulatta
ENSCSAVG00000006671	-	88	32.065	ENSMNEG00000043715	MRPL48	100	33.884	Macaca_nemestrina
ENSCSAVG00000006671	-	85	33.146	ENSMLEG00000025711	MRPL48	79	33.146	Mandrillus_leucophaeus
ENSCSAVG00000006671	-	88	33.684	ENSMAMG00000011802	mrpl48	86	33.684	Mastacembelus_armatus
ENSCSAVG00000006671	-	82	33.721	ENSMZEG00005021086	mrpl48	79	33.133	Maylandia_zebra
ENSCSAVG00000006671	-	84	30.857	ENSMGAG00000015300	MRPL48	79	30.857	Meleagris_gallopavo
ENSCSAVG00000006671	-	89	31.746	ENSMAUG00000000711	Mrpl48	84	33.333	Mesocricetus_auratus
ENSCSAVG00000006671	-	86	34.254	ENSMICG00000028005	-	70	34.254	Microcebus_murinus
ENSCSAVG00000006671	-	86	32.778	ENSMICG00000012645	-	80	32.778	Microcebus_murinus
ENSCSAVG00000006671	-	58	33.884	ENSMOCG00000013808	Mrpl48	100	33.884	Microtus_ochrogaster
ENSCSAVG00000006671	-	57	30.000	ENSMMOG00000020651	mrpl48	96	30.000	Mola_mola
ENSCSAVG00000006671	-	85	33.333	ENSMODG00000007576	MRPL48	78	33.333	Monodelphis_domestica
ENSCSAVG00000006671	-	96	33.816	ENSMALG00000008851	mrpl48	91	33.816	Monopterus_albus
ENSCSAVG00000006671	-	89	31.551	ENSMUSG00000030706	Mrpl48	98	33.613	Mus_musculus
ENSCSAVG00000006671	-	89	33.155	MGP_PahariEiJ_G0013272	Mrpl48	83	33.155	Mus_pahari
ENSCSAVG00000006671	-	89	33.690	MGP_SPRETEiJ_G0031161	Mrpl48	83	33.690	Mus_spretus
ENSCSAVG00000006671	-	86	31.285	ENSMPUG00000019110	-	78	31.285	Mustela_putorius_furo
ENSCSAVG00000006671	-	89	32.275	ENSMLUG00000012083	MRPL48	84	32.275	Myotis_lucifugus
ENSCSAVG00000006671	-	86	33.333	ENSNGAG00000006402	Mrpl48	80	33.333	Nannospalax_galili
ENSCSAVG00000006671	-	63	33.333	ENSNBRG00000011494	mrpl48	63	33.333	Neolamprologus_brichardi
ENSCSAVG00000006671	-	86	33.333	ENSNLEG00000017097	MRPL48	80	33.333	Nomascus_leucogenys
ENSCSAVG00000006671	-	85	34.270	ENSOPRG00000010373	MRPL48	89	34.270	Ochotona_princeps
ENSCSAVG00000006671	-	86	32.222	ENSODEG00000005929	MRPL48	100	33.058	Octodon_degus
ENSCSAVG00000006671	-	82	31.792	ENSONIG00000012529	mrpl48	77	30.899	Oreochromis_niloticus
ENSCSAVG00000006671	-	85	34.831	ENSOANG00000013906	-	79	34.831	Ornithorhynchus_anatinus
ENSCSAVG00000006671	-	86	33.333	ENSOCUG00000025915	-	80	33.333	Oryctolagus_cuniculus
ENSCSAVG00000006671	-	86	33.333	ENSOCUG00000009302	-	85	33.333	Oryctolagus_cuniculus
ENSCSAVG00000006671	-	90	31.250	ENSORLG00000008682	mrpl48	92	32.292	Oryzias_latipes
ENSCSAVG00000006671	-	90	31.250	ENSORLG00020004801	MRPL48	92	32.292	Oryzias_latipes_hni
ENSCSAVG00000006671	-	92	30.769	ENSORLG00015021506	mrpl48	92	32.292	Oryzias_latipes_hsok
ENSCSAVG00000006671	-	90	30.208	ENSOMEG00000019182	mrpl48	92	31.250	Oryzias_melastigma
ENSCSAVG00000006671	-	86	32.778	ENSOGAG00000027978	-	80	32.778	Otolemur_garnettii
ENSCSAVG00000006671	-	64	32.331	ENSOGAG00000004771	-	86	32.331	Otolemur_garnettii
ENSCSAVG00000006671	-	89	32.632	ENSOARG00000008118	MRPL48	84	34.211	Ovis_aries
ENSCSAVG00000006671	-	85	33.333	ENSPPAG00000039192	MRPL48	78	33.333	Pan_paniscus
ENSCSAVG00000006671	-	89	33.862	ENSPPRG00000008470	MRPL48	100	33.058	Panthera_pardus
ENSCSAVG00000006671	-	89	33.862	ENSPTIG00000020025	MRPL48	100	33.058	Panthera_tigris_altaica
ENSCSAVG00000006671	-	85	33.333	ENSPTRG00000004049	MRPL48	80	33.333	Pan_troglodytes
ENSCSAVG00000006671	-	85	33.146	ENSPANG00000019128	MRPL48	79	33.146	Papio_anubis
ENSCSAVG00000006671	-	57	32.500	ENSPKIG00000024210	mrpl48	98	32.500	Paramormyrops_kingsleyae
ENSCSAVG00000006671	-	86	32.778	ENSPSIG00000014248	MRPL48	85	32.778	Pelodiscus_sinensis
ENSCSAVG00000006671	-	75	37.037	ENSPMGG00000004557	mrpl48	95	37.654	Periophthalmus_magnuspinnatus
ENSCSAVG00000006671	-	58	33.884	ENSPEMG00000021769	Mrpl48	100	33.884	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006671	-	90	32.105	ENSPCIG00000021813	MRPL48	68	32.105	Phascolarctos_cinereus
ENSCSAVG00000006671	-	82	34.302	ENSPFOG00000014883	mrpl48	77	34.302	Poecilia_formosa
ENSCSAVG00000006671	-	82	33.526	ENSPLAG00000004162	mrpl48	82	32.749	Poecilia_latipinna
ENSCSAVG00000006671	-	82	34.302	ENSPMEG00000015944	mrpl48	78	34.302	Poecilia_mexicana
ENSCSAVG00000006671	-	82	32.164	ENSPREG00000020427	mrpl48	78	32.164	Poecilia_reticulata
ENSCSAVG00000006671	-	93	31.795	ENSPPYG00000003664	-	70	31.795	Pongo_abelii
ENSCSAVG00000006671	-	86	33.333	ENSPCOG00000025047	-	80	33.333	Propithecus_coquereli
ENSCSAVG00000006671	-	86	34.444	ENSPCOG00000020385	-	80	34.444	Propithecus_coquereli
ENSCSAVG00000006671	-	82	33.721	ENSPNYG00000020778	mrpl48	77	33.721	Pundamilia_nyererei
ENSCSAVG00000006671	-	96	31.683	ENSPNAG00000027512	mrpl48	78	31.683	Pygocentrus_nattereri
ENSCSAVG00000006671	-	86	33.333	ENSRNOG00000018042	Mrpl48	80	33.333	Rattus_norvegicus
ENSCSAVG00000006671	-	86	32.222	ENSRROG00000043160	MRPL48	80	32.222	Rhinopithecus_roxellana
ENSCSAVG00000006671	-	86	32.778	ENSSHAG00000014091	MRPL48	97	32.778	Sarcophilus_harrisii
ENSCSAVG00000006671	-	85	32.967	ENSSFOG00015002052	mrpl48	79	33.516	Scleropages_formosus
ENSCSAVG00000006671	-	94	30.542	ENSSMAG00000015781	mrpl48	90	30.542	Scophthalmus_maximus
ENSCSAVG00000006671	-	78	32.515	ENSSDUG00000014937	mrpl48	74	32.515	Seriola_dumerili
ENSCSAVG00000006671	-	78	32.515	ENSSLDG00000008081	mrpl48	74	32.515	Seriola_lalandi_dorsalis
ENSCSAVG00000006671	-	86	31.111	ENSSARG00000003792	MRPL48	66	31.111	Sorex_araneus
ENSCSAVG00000006671	-	78	33.742	ENSSPUG00000017310	MRPL48	73	33.742	Sphenodon_punctatus
ENSCSAVG00000006671	-	90	34.921	ENSSPAG00000012763	mrpl48	88	34.872	Stegastes_partitus
ENSCSAVG00000006671	-	89	33.862	ENSSSCG00000014829	MRPL48	84	33.862	Sus_scrofa
ENSCSAVG00000006671	-	84	33.714	ENSTGUG00000013469	-	94	33.714	Taeniopygia_guttata
ENSCSAVG00000006671	-	96	30.244	ENSTRUG00000005273	mrpl48	96	30.244	Takifugu_rubripes
ENSCSAVG00000006671	-	89	33.511	ENSTNIG00000007416	mrpl48	83	33.511	Tetraodon_nigroviridis
ENSCSAVG00000006671	-	89	33.333	ENSTTRG00000005403	MRPL48	93	33.333	Tursiops_truncatus
ENSCSAVG00000006671	-	89	32.804	ENSUMAG00000010317	MRPL48	84	32.804	Ursus_maritimus
ENSCSAVG00000006671	-	89	33.333	ENSVPAG00000004657	MRPL48	93	33.333	Vicugna_pacos
ENSCSAVG00000006671	-	67	34.286	ENSVVUG00000024543	-	100	34.426	Vulpes_vulpes
ENSCSAVG00000006671	-	87	33.149	ENSXETG00000023199	mrpl48	81	33.149	Xenopus_tropicalis
ENSCSAVG00000006671	-	82	34.104	ENSXCOG00000004111	mrpl48	82	32.164	Xiphophorus_couchianus
ENSCSAVG00000006671	-	82	35.465	ENSXMAG00000011518	mrpl48	78	35.465	Xiphophorus_maculatus