EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006744 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2481 bases
Position: chrreftig_44:1056435-1058915
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011519	eIF-3c_N	PF05470.12	6.4e-195	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011652	-	2316	-	ENSCSAVP00000011519	752 (aa)	-	H2Z1Q7

Gene Model

Click here to download ENSCSAVG00000006744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006744	-	96	57.018	ENSG00000205609	EIF3CL	79	56.336	Homo_sapiens
ENSCSAVG00000006744	-	96	57.018	ENSG00000184110	EIF3C	97	57.143	Homo_sapiens
ENSCSAVG00000006744	-	90	56.392	ENSAPOG00000024092	eif3c	92	51.729	Acanthochromis_polyacanthus
ENSCSAVG00000006744	-	96	56.842	ENSAMEG00000015454	-	79	56.164	Ailuropoda_melanoleuca
ENSCSAVG00000006744	-	91	57.143	ENSACIG00000015082	eif3c	79	57.143	Amphilophus_citrinellus
ENSCSAVG00000006744	-	90	56.392	ENSAOCG00000021466	eif3c	79	56.392	Amphiprion_ocellaris
ENSCSAVG00000006744	-	90	56.392	ENSAPEG00000010521	eif3c	79	56.392	Amphiprion_percula
ENSCSAVG00000006744	-	90	56.217	ENSATEG00000019001	eif3c	76	55.366	Anabas_testudineus
ENSCSAVG00000006744	-	92	56.604	ENSACAG00000005937	-	80	55.740	Anolis_carolinensis
ENSCSAVG00000006744	-	96	57.018	ENSANAG00000020640	-	79	56.336	Aotus_nancymaae
ENSCSAVG00000006744	-	75	56.140	ENSACLG00000009347	eif3c	92	49.445	Astatotilapia_calliptera
ENSCSAVG00000006744	-	90	57.265	ENSACLG00000009322	eif3c	81	57.265	Astatotilapia_calliptera
ENSCSAVG00000006744	-	92	56.522	ENSAMXG00000020949	eif3c	75	56.522	Astyanax_mexicanus
ENSCSAVG00000006744	-	90	57.391	ENSBTAG00000006543	EIF3CL	79	55.993	Bos_taurus
ENSCSAVG00000006744	-	99	41.932	WBGene00001226	eif-3.C	89	42.054	Caenorhabditis_elegans
ENSCSAVG00000006744	-	96	57.018	ENSCJAG00000006341	-	90	58.333	Callithrix_jacchus
ENSCSAVG00000006744	-	96	56.842	ENSCAFG00000017143	-	76	57.391	Canis_familiaris
ENSCSAVG00000006744	-	96	56.842	ENSCAFG00020017587	-	79	56.164	Canis_lupus_dingo
ENSCSAVG00000006744	-	90	57.391	ENSCHIG00000024795	-	78	57.391	Capra_hircus
ENSCSAVG00000006744	-	96	56.491	ENSTSYG00000003486	-	79	55.822	Carlito_syrichta
ENSCSAVG00000006744	-	90	57.391	ENSCAPG00000015887	-	96	43.841	Cavia_aperea
ENSCSAVG00000006744	-	96	56.667	ENSCPOG00000007533	-	79	55.993	Cavia_porcellus
ENSCSAVG00000006744	-	96	54.211	ENSCCAG00000027724	-	79	53.596	Cebus_capucinus
ENSCSAVG00000006744	-	96	57.018	ENSCCAG00000034928	-	81	56.336	Cebus_capucinus
ENSCSAVG00000006744	-	76	48.542	ENSCCAG00000029099	-	91	42.996	Cebus_capucinus
ENSCSAVG00000006744	-	96	57.018	ENSCATG00000032673	-	79	56.336	Cercocebus_atys
ENSCSAVG00000006744	-	96	56.491	ENSCLAG00000011094	-	79	55.822	Chinchilla_lanigera
ENSCSAVG00000006744	-	96	57.018	ENSCSAG00000006297	-	79	56.336	Chlorocebus_sabaeus
ENSCSAVG00000006744	-	61	50.000	ENSCHOG00000003120	-	83	50.000	Choloepus_hoffmanni
ENSCSAVG00000006744	-	78	53.112	ENSCPBG00000012407	-	81	53.236	Chrysemys_picta_bellii
ENSCSAVG00000006744	-	96	57.018	ENSCANG00000033626	-	79	56.336	Colobus_angolensis_palliatus
ENSCSAVG00000006744	-	90	57.391	ENSCGRG00001015265	EIF3C	79	55.822	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006744	-	90	55.439	ENSCSEG00000017770	eif3c	77	54.701	Cynoglossus_semilaevis
ENSCSAVG00000006744	-	99	51.795	ENSCVAG00000005402	eif3c	91	52.051	Cyprinodon_variegatus
ENSCSAVG00000006744	-	92	56.410	ENSDARG00000016443	eif3c	76	56.410	Danio_rerio
ENSCSAVG00000006744	-	96	56.842	ENSDNOG00000031497	-	79	56.164	Dasypus_novemcinctus
ENSCSAVG00000006744	-	96	56.667	ENSDORG00000016471	Eif3c	92	50.000	Dipodomys_ordii
ENSCSAVG00000006744	-	80	64.171	ENSETEG00000013527	-	72	64.171	Echinops_telfairi
ENSCSAVG00000006744	-	98	57.018	ENSECAG00000008746	-	79	56.336	Equus_caballus
ENSCSAVG00000006744	-	73	39.606	ENSEEUG00000000726	-	60	39.606	Erinaceus_europaeus
ENSCSAVG00000006744	-	83	57.391	ENSEEUG00000006148	-	84	56.473	Erinaceus_europaeus
ENSCSAVG00000006744	-	90	56.567	ENSELUG00000022257	eif3c	93	52.005	Esox_lucius
ENSCSAVG00000006744	-	97	56.089	ENSFCAG00000015782	-	79	56.164	Felis_catus
ENSCSAVG00000006744	-	96	56.842	ENSFDAG00000003588	-	92	50.122	Fukomys_damarensis
ENSCSAVG00000006744	-	92	56.410	ENSFHEG00000014154	EIF3C	79	56.410	Fundulus_heteroclitus
ENSCSAVG00000006744	-	92	56.410	ENSGMOG00000016885	eif3c	79	56.410	Gadus_morhua
ENSCSAVG00000006744	-	90	57.042	ENSGACG00000007652	eif3c	79	54.860	Gasterosteus_aculeatus
ENSCSAVG00000006744	-	89	56.942	ENSGAGG00000006666	-	84	55.519	Gopherus_agassizii
ENSCSAVG00000006744	-	98	56.842	ENSGGOG00000026919	EIF3C	82	56.164	Gorilla_gorilla
ENSCSAVG00000006744	-	63	40.369	ENSGGOG00000022677	-	99	40.283	Gorilla_gorilla
ENSCSAVG00000006744	-	96	56.842	ENSHGLG00000011445	EIF3C	79	56.164	Heterocephalus_glaber_female
ENSCSAVG00000006744	-	96	56.842	ENSHGLG00100000217	EIF3C	79	56.164	Heterocephalus_glaber_male
ENSCSAVG00000006744	-	93	55.088	ENSHCOG00000019694	eif3c	76	54.701	Hippocampus_comes
ENSCSAVG00000006744	-	90	55.965	ENSIPUG00000016878	eif3c	91	49.491	Ictalurus_punctatus
ENSCSAVG00000006744	-	96	56.667	ENSSTOG00000021278	-	79	55.993	Ictidomys_tridecemlineatus
ENSCSAVG00000006744	-	98	56.667	ENSJJAG00000012722	Eif3c	79	55.993	Jaculus_jaculus
ENSCSAVG00000006744	-	93	56.410	ENSKMAG00000021662	eif3c	76	56.410	Kryptolebias_marmoratus
ENSCSAVG00000006744	-	99	50.953	ENSLBEG00000023370	eif3c	92	50.509	Labrus_bergylta
ENSCSAVG00000006744	-	96	56.842	ENSLAFG00000027426	-	79	56.164	Loxodonta_africana
ENSCSAVG00000006744	-	96	57.018	ENSMFAG00000041930	-	79	56.336	Macaca_fascicularis
ENSCSAVG00000006744	-	96	57.018	ENSMMUG00000011798	-	79	56.336	Macaca_mulatta
ENSCSAVG00000006744	-	96	57.018	ENSMNEG00000023915	-	79	56.336	Macaca_nemestrina
ENSCSAVG00000006744	-	96	57.018	ENSMLEG00000027529	-	79	56.336	Mandrillus_leucophaeus
ENSCSAVG00000006744	-	99	51.344	ENSMAMG00000012512	eif3c	92	50.317	Mastacembelus_armatus
ENSCSAVG00000006744	-	99	50.775	ENSMZEG00005013685	eif3c	82	57.265	Maylandia_zebra
ENSCSAVG00000006744	-	75	56.140	ENSMZEG00005013699	eif3c	66	56.140	Maylandia_zebra
ENSCSAVG00000006744	-	90	57.391	ENSMAUG00000010621	Eif3c	79	55.822	Mesocricetus_auratus
ENSCSAVG00000006744	-	96	56.842	ENSMICG00000036748	-	79	56.164	Microcebus_murinus
ENSCSAVG00000006744	-	88	56.491	ENSMOCG00000004204	Eif3c	77	55.822	Microtus_ochrogaster
ENSCSAVG00000006744	-	99	50.777	ENSMMOG00000001572	eif3c	92	51.094	Mola_mola
ENSCSAVG00000006744	-	93	56.667	ENSMODG00000015579	-	79	55.993	Monodelphis_domestica
ENSCSAVG00000006744	-	99	51.571	ENSMALG00000008907	eif3c	92	52.157	Monopterus_albus
ENSCSAVG00000006744	-	96	56.491	MGP_CAROLIEiJ_G0030451	Eif3c	79	55.822	Mus_caroli
ENSCSAVG00000006744	-	96	56.491	ENSMUSG00000030738	Eif3c	79	55.822	Mus_musculus
ENSCSAVG00000006744	-	90	57.391	MGP_PahariEiJ_G0013661	Eif3c	79	55.137	Mus_pahari
ENSCSAVG00000006744	-	96	56.491	MGP_SPRETEiJ_G0031565	Eif3c	79	55.822	Mus_spretus
ENSCSAVG00000006744	-	98	56.818	ENSMLUG00000015558	-	79	55.973	Myotis_lucifugus
ENSCSAVG00000006744	-	89	40.453	ENSNGAG00000010901	-	89	40.395	Nannospalax_galili
ENSCSAVG00000006744	-	98	56.667	ENSNGAG00000007177	-	79	55.993	Nannospalax_galili
ENSCSAVG00000006744	-	100	47.708	ENSNLEG00000001425	-	92	48.139	Nomascus_leucogenys
ENSCSAVG00000006744	-	95	35.556	ENSMEUG00000005317	-	94	35.049	Notamacropus_eugenii
ENSCSAVG00000006744	-	92	48.370	ENSMEUG00000009939	-	76	48.459	Notamacropus_eugenii
ENSCSAVG00000006744	-	90	56.522	ENSOPRG00000000931	-	79	55.822	Ochotona_princeps
ENSCSAVG00000006744	-	90	57.391	ENSODEG00000013508	-	79	56.164	Octodon_degus
ENSCSAVG00000006744	-	75	38.462	ENSONIG00000011434	eif3c	93	38.462	Oreochromis_niloticus
ENSCSAVG00000006744	-	93	55.692	ENSOANG00000011410	-	78	54.762	Ornithorhynchus_anatinus
ENSCSAVG00000006744	-	96	56.842	ENSOCUG00000022489	-	79	56.164	Oryctolagus_cuniculus
ENSCSAVG00000006744	-	90	56.667	ENSORLG00000006318	eif3c	94	50.308	Oryzias_latipes
ENSCSAVG00000006744	-	90	56.667	ENSORLG00020015713	eif3c	90	50.710	Oryzias_latipes_hni
ENSCSAVG00000006744	-	90	56.667	ENSORLG00015013772	eif3c	80	54.770	Oryzias_latipes_hsok
ENSCSAVG00000006744	-	92	56.089	ENSOMEG00000020450	eif3c	78	55.973	Oryzias_melastigma
ENSCSAVG00000006744	-	96	56.842	ENSOGAG00000012737	-	76	57.391	Otolemur_garnettii
ENSCSAVG00000006744	-	90	57.391	ENSOARG00000002892	-	79	56.164	Ovis_aries
ENSCSAVG00000006744	-	97	56.089	ENSPPRG00000012336	-	79	56.164	Panthera_pardus
ENSCSAVG00000006744	-	97	56.089	ENSPTIG00000011712	-	79	56.164	Panthera_tigris_altaica
ENSCSAVG00000006744	-	96	57.018	ENSPANG00000021151	-	79	56.336	Papio_anubis
ENSCSAVG00000006744	-	92	57.265	ENSPKIG00000002049	eif3c	76	57.265	Paramormyrops_kingsleyae
ENSCSAVG00000006744	-	91	56.667	ENSPMGG00000005409	eif3c	80	56.667	Periophthalmus_magnuspinnatus
ENSCSAVG00000006744	-	96	56.491	ENSPEMG00000010899	Eif3c	80	55.822	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006744	-	94	56.174	ENSPCIG00000025206	-	79	56.089	Phascolarctos_cinereus
ENSCSAVG00000006744	-	92	56.485	ENSPFOG00000004476	eif3c	77	56.410	Poecilia_formosa
ENSCSAVG00000006744	-	99	51.198	ENSPLAG00000017480	eif3c	92	51.646	Poecilia_latipinna
ENSCSAVG00000006744	-	99	51.338	ENSPMEG00000019512	eif3c	92	51.786	Poecilia_mexicana
ENSCSAVG00000006744	-	99	51.008	ENSPREG00000023139	eif3c	92	51.075	Poecilia_reticulata
ENSCSAVG00000006744	-	96	55.614	ENSPPYG00000007227	-	79	54.949	Pongo_abelii
ENSCSAVG00000006744	-	75	56.316	ENSPCAG00000012710	-	95	56.316	Procavia_capensis
ENSCSAVG00000006744	-	96	56.842	ENSPCOG00000019289	-	92	50.308	Propithecus_coquereli
ENSCSAVG00000006744	-	96	56.667	ENSPVAG00000005804	-	79	56.410	Pteropus_vampyrus
ENSCSAVG00000006744	-	100	51.866	ENSPNAG00000024040	eif3c	92	51.163	Pygocentrus_nattereri
ENSCSAVG00000006744	-	90	56.522	ENSRNOG00000018761	Eif3c	79	55.822	Rattus_norvegicus
ENSCSAVG00000006744	-	96	57.018	ENSRBIG00000044009	-	76	57.391	Rhinopithecus_bieti
ENSCSAVG00000006744	-	96	57.018	ENSRROG00000043626	-	79	56.336	Rhinopithecus_roxellana
ENSCSAVG00000006744	-	96	57.018	ENSSBOG00000032155	-	79	56.336	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006744	-	93	56.469	ENSSHAG00000011808	-	82	55.802	Sarcophilus_harrisii
ENSCSAVG00000006744	-	92	56.410	ENSSFOG00015021823	eif3c	76	56.410	Scleropages_formosus
ENSCSAVG00000006744	-	90	57.018	ENSSMAG00000016638	eif3c	77	56.314	Scophthalmus_maximus
ENSCSAVG00000006744	-	99	50.687	ENSSDUG00000023117	eif3c	92	50.750	Seriola_dumerili
ENSCSAVG00000006744	-	99	51.809	ENSSLDG00000009706	eif3c	92	51.813	Seriola_lalandi_dorsalis
ENSCSAVG00000006744	-	99	56.261	ENSSPUG00000016470	-	92	51.625	Sphenodon_punctatus
ENSCSAVG00000006744	-	90	56.667	ENSSPAG00000000426	eif3c	77	55.877	Stegastes_partitus
ENSCSAVG00000006744	-	90	57.391	ENSSSCG00000034927	-	79	56.507	Sus_scrofa
ENSCSAVG00000006744	-	90	55.769	ENSTRUG00000008951	eif3c	83	55.556	Takifugu_rubripes
ENSCSAVG00000006744	-	98	55.556	ENSTNIG00000015210	eif3c	93	46.492	Tetraodon_nigroviridis
ENSCSAVG00000006744	-	96	56.842	ENSTTRG00000005880	-	79	56.164	Tursiops_truncatus
ENSCSAVG00000006744	-	75	56.842	ENSUAMG00000001127	-	97	68.155	Ursus_americanus
ENSCSAVG00000006744	-	96	56.842	ENSUMAG00000010927	-	79	56.164	Ursus_maritimus
ENSCSAVG00000006744	-	96	55.304	ENSVVUG00000025970	-	79	55.232	Vulpes_vulpes
ENSCSAVG00000006744	-	95	55.670	ENSXETG00000002941	eif3c	78	55.746	Xenopus_tropicalis
ENSCSAVG00000006744	-	92	56.303	ENSXMAG00000013796	eif3c	77	56.303	Xiphophorus_maculatus