EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006814 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1278 bases
Position: chrreftig_13:1419995-1421272
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011615	Methyltr_RsmB-F	PF01189.17	5.1e-36	1	1
ENSCSAVP00000011614	Methyltr_RsmB-F	PF01189.17	8.9e-34	1	1
ENSCSAVP00000011613	Methyltr_RsmB-F	PF01189.17	1.9e-33	1	2
ENSCSAVP00000011613	Methyltr_RsmB-F	PF01189.17	1.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011749	-	1146	-	ENSCSAVP00000011614	382 (aa)	-	H2Z202
ENSCSAVT00000011748	-	1188	-	ENSCSAVP00000011613	395 (aa)	-	H2Z201
ENSCSAVT00000011750	-	1227	-	ENSCSAVP00000011615	409 (aa)	-	H2Z203

Gene Model

Click here to download ENSCSAVG00000006814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006814's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006814	-	96	42.195	ENSG00000130305	NSUN5	98	42.118	Homo_sapiens
ENSCSAVG00000006814	-	99	44.313	ENSAPOG00000016848	nsun5	96	44.313	Acanthochromis_polyacanthus
ENSCSAVG00000006814	-	99	41.038	ENSAMEG00000011119	NSUN5	91	41.038	Ailuropoda_melanoleuca
ENSCSAVG00000006814	-	99	45.952	ENSACIG00000001153	nsun5	85	45.952	Amphilophus_citrinellus
ENSCSAVG00000006814	-	99	44.313	ENSAOCG00000019331	nsun5	83	44.313	Amphiprion_ocellaris
ENSCSAVG00000006814	-	99	44.313	ENSAPEG00000013003	nsun5	83	44.313	Amphiprion_percula
ENSCSAVG00000006814	-	99	46.009	ENSATEG00000010576	nsun5	83	46.009	Anabas_testudineus
ENSCSAVG00000006814	-	60	46.835	ENSAPLG00000008049	NSUN5	83	48.133	Anas_platyrhynchos
ENSCSAVG00000006814	-	99	43.294	ENSACAG00000000193	NSUN5	92	43.294	Anolis_carolinensis
ENSCSAVG00000006814	-	96	41.951	ENSANAG00000029059	NSUN5	91	42.118	Aotus_nancymaae
ENSCSAVG00000006814	-	99	44.550	ENSACLG00000021086	nsun5	84	44.550	Astatotilapia_calliptera
ENSCSAVG00000006814	-	99	44.231	ENSAMXG00000016626	nsun5	91	44.231	Astyanax_mexicanus
ENSCSAVG00000006814	-	99	41.882	ENSBTAG00000017941	NSUN5	91	42.118	Bos_taurus
ENSCSAVG00000006814	-	99	38.303	WBGene00013151	nsun-5	98	41.319	Caenorhabditis_elegans
ENSCSAVG00000006814	-	96	41.951	ENSCJAG00000016968	NSUN5	91	42.118	Callithrix_jacchus
ENSCSAVG00000006814	-	99	41.135	ENSCAFG00000013197	NSUN5	90	41.135	Canis_familiaris
ENSCSAVG00000006814	-	99	41.135	ENSCAFG00020012547	NSUN5	90	41.135	Canis_lupus_dingo
ENSCSAVG00000006814	-	99	41.412	ENSCHIG00000012082	NSUN5	94	40.092	Capra_hircus
ENSCSAVG00000006814	-	94	41.791	ENSTSYG00000036549	NSUN5	90	41.791	Carlito_syrichta
ENSCSAVG00000006814	-	78	43.284	ENSCAPG00000013989	NSUN5	90	43.059	Cavia_aperea
ENSCSAVG00000006814	-	96	42.131	ENSCPOG00000023149	NSUN5	92	42.488	Cavia_porcellus
ENSCSAVG00000006814	-	96	42.092	ENSCCAG00000021042	NSUN5	91	42.254	Cebus_capucinus
ENSCSAVG00000006814	-	99	41.647	ENSCATG00000015253	NSUN5	91	41.647	Cercocebus_atys
ENSCSAVG00000006814	-	99	41.882	ENSCLAG00000005624	NSUN5	94	41.882	Chinchilla_lanigera
ENSCSAVG00000006814	-	99	42.118	ENSCSAG00000018161	NSUN5	91	42.118	Chlorocebus_sabaeus
ENSCSAVG00000006814	-	58	34.483	ENSCHOG00000013725	-	84	33.577	Choloepus_hoffmanni
ENSCSAVG00000006814	-	87	43.666	ENSCPBG00000009699	NSUN5	88	43.666	Chrysemys_picta_bellii
ENSCSAVG00000006814	-	99	63.171	ENSCING00000023888	-	97	63.171	Ciona_intestinalis
ENSCSAVG00000006814	-	95	41.912	ENSCANG00000043217	NSUN5	91	41.647	Colobus_angolensis_palliatus
ENSCSAVG00000006814	-	99	40.941	ENSCGRG00001006270	Nsun5	91	40.941	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006814	-	78	41.916	ENSCGRG00000006943	Nsun5	86	42.286	Cricetulus_griseus_crigri
ENSCSAVG00000006814	-	99	44.550	ENSCSEG00000000376	nsun5	97	44.550	Cynoglossus_semilaevis
ENSCSAVG00000006814	-	99	45.667	ENSCVAG00000001813	nsun5	83	45.714	Cyprinodon_variegatus
ENSCSAVG00000006814	-	99	44.131	ENSDARG00000043209	nsun5	95	44.153	Danio_rerio
ENSCSAVG00000006814	-	96	40.534	ENSDNOG00000000305	NSUN5	90	40.941	Dasypus_novemcinctus
ENSCSAVG00000006814	-	99	41.882	ENSDORG00000010530	Nsun5	90	41.647	Dipodomys_ordii
ENSCSAVG00000006814	-	85	42.234	ENSETEG00000000934	NSUN5	89	42.234	Echinops_telfairi
ENSCSAVG00000006814	-	98	33.079	ENSEBUG00000006181	nsun5	83	40.000	Eptatretus_burgeri
ENSCSAVG00000006814	-	96	41.849	ENSEASG00005016116	NSUN5	93	40.092	Equus_asinus_asinus
ENSCSAVG00000006814	-	99	42.019	ENSECAG00000012138	NSUN5	93	40.092	Equus_caballus
ENSCSAVG00000006814	-	96	38.049	ENSEEUG00000004861	NSUN5	93	38.353	Erinaceus_europaeus
ENSCSAVG00000006814	-	99	45.863	ENSELUG00000013971	nsun5	77	45.863	Esox_lucius
ENSCSAVG00000006814	-	99	41.315	ENSFCAG00000012667	NSUN5	90	41.549	Felis_catus
ENSCSAVG00000006814	-	94	42.537	ENSFALG00000013697	NSUN5	88	42.537	Ficedula_albicollis
ENSCSAVG00000006814	-	99	42.080	ENSFDAG00000009683	NSUN5	91	42.080	Fukomys_damarensis
ENSCSAVG00000006814	-	99	44.787	ENSFHEG00000022931	nsun5	84	44.787	Fundulus_heteroclitus
ENSCSAVG00000006814	-	99	46.081	ENSGMOG00000005869	nsun5	99	46.081	Gadus_morhua
ENSCSAVG00000006814	-	99	43.294	ENSGALG00000000891	NSUN5	90	43.294	Gallus_gallus
ENSCSAVG00000006814	-	99	43.675	ENSGAFG00000019082	nsun5	84	44.869	Gambusia_affinis
ENSCSAVG00000006814	-	99	45.991	ENSGACG00000006042	nsun5	95	45.991	Gasterosteus_aculeatus
ENSCSAVG00000006814	-	87	43.396	ENSGAGG00000017057	NSUN5	88	43.396	Gopherus_agassizii
ENSCSAVG00000006814	-	99	41.232	ENSGGOG00000011730	-	89	41.232	Gorilla_gorilla
ENSCSAVG00000006814	-	96	42.195	ENSGGOG00000043878	-	91	42.353	Gorilla_gorilla
ENSCSAVG00000006814	-	99	44.550	ENSHBUG00000007202	nsun5	84	44.550	Haplochromis_burtoni
ENSCSAVG00000006814	-	99	43.026	ENSHGLG00000018321	NSUN5	91	42.553	Heterocephalus_glaber_female
ENSCSAVG00000006814	-	99	42.080	ENSHGLG00100003118	NSUN5	91	41.844	Heterocephalus_glaber_male
ENSCSAVG00000006814	-	99	43.602	ENSHCOG00000002678	nsun5	96	43.602	Hippocampus_comes
ENSCSAVG00000006814	-	99	43.705	ENSIPUG00000009246	NSUN5	88	43.705	Ictalurus_punctatus
ENSCSAVG00000006814	-	89	42.746	ENSSTOG00000015023	NSUN5	88	42.746	Ictidomys_tridecemlineatus
ENSCSAVG00000006814	-	99	42.118	ENSJJAG00000012146	Nsun5	90	42.118	Jaculus_jaculus
ENSCSAVG00000006814	-	99	41.725	ENSKMAG00000011806	nsun5	96	43.590	Kryptolebias_marmoratus
ENSCSAVG00000006814	-	99	45.154	ENSLBEG00000007743	nsun5	84	45.154	Labrus_bergylta
ENSCSAVG00000006814	-	99	48.227	ENSLACG00000018926	NSUN5	89	48.227	Latimeria_chalumnae
ENSCSAVG00000006814	-	99	43.294	ENSLOCG00000001105	nsun5	86	43.294	Lepisosteus_oculatus
ENSCSAVG00000006814	-	99	41.371	ENSLAFG00000017255	NSUN5	92	39.720	Loxodonta_africana
ENSCSAVG00000006814	-	99	41.844	ENSMFAG00000037773	NSUN5	90	41.844	Macaca_fascicularis
ENSCSAVG00000006814	-	99	41.412	ENSMMUG00000022776	NSUN5	91	41.412	Macaca_mulatta
ENSCSAVG00000006814	-	99	41.647	ENSMNEG00000032761	NSUN5	91	41.647	Macaca_nemestrina
ENSCSAVG00000006814	-	99	41.647	ENSMLEG00000033115	NSUN5	91	41.647	Mandrillus_leucophaeus
ENSCSAVG00000006814	-	99	44.787	ENSMAMG00000017048	nsun5	80	44.787	Mastacembelus_armatus
ENSCSAVG00000006814	-	99	44.550	ENSMZEG00005020689	nsun5	84	44.550	Maylandia_zebra
ENSCSAVG00000006814	-	69	44.558	ENSMGAG00000001654	NSUN5	85	44.558	Meleagris_gallopavo
ENSCSAVG00000006814	-	99	40.471	ENSMAUG00000019013	Nsun5	91	40.471	Mesocricetus_auratus
ENSCSAVG00000006814	-	96	40.777	ENSMICG00000035469	NSUN5	91	41.176	Microcebus_murinus
ENSCSAVG00000006814	-	96	41.422	ENSMOCG00000021028	Nsun5	91	41.608	Microtus_ochrogaster
ENSCSAVG00000006814	-	99	44.656	ENSMMOG00000021664	nsun5	94	43.934	Mola_mola
ENSCSAVG00000006814	-	99	43.294	ENSMODG00000013753	NSUN5	92	43.294	Monodelphis_domestica
ENSCSAVG00000006814	-	99	42.891	ENSMALG00000003855	nsun5	84	42.891	Monopterus_albus
ENSCSAVG00000006814	-	95	40.686	MGP_CAROLIEiJ_G0027835	Nsun5	91	40.706	Mus_caroli
ENSCSAVG00000006814	-	96	40.244	ENSMUSG00000000916	Nsun5	91	40.471	Mus_musculus
ENSCSAVG00000006814	-	95	41.422	MGP_PahariEiJ_G0024415	Nsun5	91	41.608	Mus_pahari
ENSCSAVG00000006814	-	96	40.732	MGP_SPRETEiJ_G0028834	Nsun5	91	40.941	Mus_spretus
ENSCSAVG00000006814	-	99	41.844	ENSMPUG00000016038	NSUN5	89	41.608	Mustela_putorius_furo
ENSCSAVG00000006814	-	96	41.019	ENSMLUG00000008380	NSUN5	93	39.492	Myotis_lucifugus
ENSCSAVG00000006814	-	95	40.931	ENSNGAG00000015157	Nsun5	91	40.941	Nannospalax_galili
ENSCSAVG00000006814	-	99	44.313	ENSNBRG00000001723	nsun5	84	44.313	Neolamprologus_brichardi
ENSCSAVG00000006814	-	99	34.834	ENSNLEG00000008648	-	90	34.834	Nomascus_leucogenys
ENSCSAVG00000006814	-	95	38.400	ENSNLEG00000015518	-	89	38.718	Nomascus_leucogenys
ENSCSAVG00000006814	-	99	42.925	ENSMEUG00000012463	NSUN5	98	42.925	Notamacropus_eugenii
ENSCSAVG00000006814	-	99	42.254	ENSOPRG00000006191	NSUN5	90	42.254	Ochotona_princeps
ENSCSAVG00000006814	-	99	41.844	ENSODEG00000015132	NSUN5	90	42.080	Octodon_degus
ENSCSAVG00000006814	-	99	44.787	ENSONIG00000001912	nsun5	85	44.787	Oreochromis_niloticus
ENSCSAVG00000006814	-	93	45.113	ENSOANG00000014405	-	89	45.113	Ornithorhynchus_anatinus
ENSCSAVG00000006814	-	99	44.235	ENSORLG00000003480	nsun5	87	44.235	Oryzias_latipes
ENSCSAVG00000006814	-	99	44.471	ENSORLG00020017611	nsun5	86	44.471	Oryzias_latipes_hni
ENSCSAVG00000006814	-	92	44.697	ENSORLG00015009554	nsun5	56	44.697	Oryzias_latipes_hsok
ENSCSAVG00000006814	-	99	45.238	ENSOMEG00000006110	nsun5	86	45.238	Oryzias_melastigma
ENSCSAVG00000006814	-	99	41.882	ENSOGAG00000002362	NSUN5	93	40.553	Otolemur_garnettii
ENSCSAVG00000006814	-	93	41.206	ENSOARG00000012934	NSUN5	93	39.803	Ovis_aries
ENSCSAVG00000006814	-	95	41.728	ENSPPAG00000037296	NSUN5	98	39.048	Pan_paniscus
ENSCSAVG00000006814	-	99	41.080	ENSPPRG00000014831	NSUN5	86	41.549	Panthera_pardus
ENSCSAVG00000006814	-	99	39.048	ENSPTRG00000042795	-	90	40.238	Pan_troglodytes
ENSCSAVG00000006814	-	99	39.286	ENSPTRG00000046760	-	90	40.476	Pan_troglodytes
ENSCSAVG00000006814	-	96	41.951	ENSPTRG00000045195	-	91	42.118	Pan_troglodytes
ENSCSAVG00000006814	-	96	41.951	ENSPTRG00000019268	NSUN5	90	41.882	Pan_troglodytes
ENSCSAVG00000006814	-	99	41.647	ENSPANG00000018605	NSUN5	91	41.647	Papio_anubis
ENSCSAVG00000006814	-	99	44.181	ENSPKIG00000010935	nsun5	87	44.181	Paramormyrops_kingsleyae
ENSCSAVG00000006814	-	81	43.750	ENSPSIG00000007787	NSUN5	87	43.750	Pelodiscus_sinensis
ENSCSAVG00000006814	-	99	43.301	ENSPMGG00000000744	nsun5	88	44.211	Periophthalmus_magnuspinnatus
ENSCSAVG00000006814	-	95	40.931	ENSPEMG00000010466	Nsun5	91	41.135	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006814	-	99	42.925	ENSPCIG00000023276	NSUN5	93	42.925	Phascolarctos_cinereus
ENSCSAVG00000006814	-	99	44.869	ENSPFOG00000006001	nsun5	84	44.869	Poecilia_formosa
ENSCSAVG00000006814	-	99	44.869	ENSPLAG00000009355	nsun5	84	44.869	Poecilia_latipinna
ENSCSAVG00000006814	-	99	43.675	ENSPMEG00000006237	nsun5	84	44.869	Poecilia_mexicana
ENSCSAVG00000006814	-	99	44.391	ENSPREG00000000892	nsun5	97	44.391	Poecilia_reticulata
ENSCSAVG00000006814	-	63	46.000	ENSPPYG00000017479	-	84	46.000	Pongo_abelii
ENSCSAVG00000006814	-	85	39.617	ENSPPYG00000017508	-	100	39.842	Pongo_abelii
ENSCSAVG00000006814	-	60	41.564	ENSPCAG00000010802	-	85	40.562	Procavia_capensis
ENSCSAVG00000006814	-	96	41.262	ENSPCOG00000026928	NSUN5	93	40.323	Propithecus_coquereli
ENSCSAVG00000006814	-	99	41.315	ENSPVAG00000012102	NSUN5	91	41.315	Pteropus_vampyrus
ENSCSAVG00000006814	-	99	44.550	ENSPNYG00000009412	nsun5	84	44.550	Pundamilia_nyererei
ENSCSAVG00000006814	-	99	44.811	ENSPNAG00000005627	nsun5	86	44.811	Pygocentrus_nattereri
ENSCSAVG00000006814	-	99	40.662	ENSRNOG00000001450	Nsun5	93	40.662	Rattus_norvegicus
ENSCSAVG00000006814	-	95	41.667	ENSRBIG00000031049	NSUN5	91	41.647	Rhinopithecus_bieti
ENSCSAVG00000006814	-	95	41.667	ENSRROG00000041917	NSUN5	91	41.412	Rhinopithecus_roxellana
ENSCSAVG00000006814	-	92	31.544	YNL022C	-	99	31.084	Saccharomyces_cerevisiae
ENSCSAVG00000006814	-	68	46.233	ENSSBOG00000028211	NSUN5	88	46.233	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006814	-	99	39.387	ENSSHAG00000015172	NSUN5	92	39.387	Sarcophilus_harrisii
ENSCSAVG00000006814	-	99	43.632	ENSSFOG00015004641	nsun5	87	43.632	Scleropages_formosus
ENSCSAVG00000006814	-	99	42.619	ENSSMAG00000014614	nsun5	84	42.619	Scophthalmus_maximus
ENSCSAVG00000006814	-	99	43.972	ENSSDUG00000015935	nsun5	96	43.972	Seriola_dumerili
ENSCSAVG00000006814	-	99	43.632	ENSSLDG00000023045	nsun5	98	43.333	Seriola_lalandi_dorsalis
ENSCSAVG00000006814	-	85	45.055	ENSSPUG00000000580	NSUN5	95	45.055	Sphenodon_punctatus
ENSCSAVG00000006814	-	99	44.787	ENSSPAG00000002242	nsun5	84	44.787	Stegastes_partitus
ENSCSAVG00000006814	-	96	42.822	ENSSSCG00000007704	NSUN5	91	43.192	Sus_scrofa
ENSCSAVG00000006814	-	99	41.647	ENSTGUG00000003110	NSUN5	91	41.647	Taeniopygia_guttata
ENSCSAVG00000006814	-	99	45.843	ENSTRUG00000017748	nsun5	84	45.843	Takifugu_rubripes
ENSCSAVG00000006814	-	99	46.062	ENSTNIG00000012017	nsun5	86	46.062	Tetraodon_nigroviridis
ENSCSAVG00000006814	-	78	42.470	ENSUAMG00000016585	NSUN5	72	42.571	Ursus_americanus
ENSCSAVG00000006814	-	88	39.142	ENSUMAG00000013592	NSUN5	82	39.572	Ursus_maritimus
ENSCSAVG00000006814	-	68	41.135	ENSVPAG00000007305	NSUN5	100	41.489	Vicugna_pacos
ENSCSAVG00000006814	-	99	41.135	ENSVVUG00000024659	NSUN5	90	41.135	Vulpes_vulpes
ENSCSAVG00000006814	-	99	43.059	ENSXETG00000010332	nsun5	86	43.059	Xenopus_tropicalis
ENSCSAVG00000006814	-	99	44.869	ENSXCOG00000003176	nsun5	85	44.869	Xiphophorus_couchianus
ENSCSAVG00000006814	-	99	44.656	ENSXMAG00000019220	nsun5	84	45.843	Xiphophorus_maculatus