EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000006819 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
7817 bases
Position
chrreftig_17:1115578-1123394
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000011626tRNA-synt_1c_CPF03950.189.4e-4511
ENSCSAVP00000011623tRNA-synt_1c_CPF03950.189.6e-4511
ENSCSAVP00000011630tRNA-synt_1c_CPF03950.189.8e-4511
ENSCSAVP00000011622tRNA-synt_1c_CPF03950.189.8e-4511
ENSCSAVP00000011631tRNA-synt_1c_CPF03950.189.8e-4511
ENSCSAVP00000011627tRNA-synt_1c_CPF03950.181e-4411
ENSCSAVP00000011628tRNA-synt_1c_CPF03950.181e-4411
ENSCSAVP00000011629tRNA-synt_1c_CPF03950.181e-4411
ENSCSAVP00000011625tRNA-synt_1c_CPF03950.181e-4411
ENSCSAVP00000011624tRNA-synt_1c_CPF03950.181e-4411
ENSCSAVP00000011625tRNA_synt_1c_R2PF04557.151.7e-0611
ENSCSAVP00000011622tRNA_synt_1c_R2PF04557.151.8e-0611
ENSCSAVP00000011630tRNA_synt_1c_R2PF04557.151.8e-0611
ENSCSAVP00000011628tRNA_synt_1c_R2PF04557.151.8e-0611
ENSCSAVP00000011626tRNA_synt_1c_R2PF04557.151.8e-0611
ENSCSAVP00000011629tRNA_synt_1c_R2PF04557.151.9e-0611
ENSCSAVP00000011627tRNA_synt_1c_R2PF04557.152e-0611
ENSCSAVP00000011623tRNA_synt_1c_R2PF04557.152e-0611
ENSCSAVP00000011624tRNA_synt_1c_R2PF04557.152.1e-0611
ENSCSAVP00000011631tRNA_synt_1c_R2PF04557.152.1e-0611
ENSCSAVP00000011626tRNA_synt_1c_R1PF04558.151.1e-4911
ENSCSAVP00000011622tRNA_synt_1c_R1PF04558.151.1e-4911
ENSCSAVP00000011627tRNA_synt_1c_R1PF04558.151.1e-4911
ENSCSAVP00000011628tRNA_synt_1c_R1PF04558.151.2e-4911
ENSCSAVP00000011625tRNA_synt_1c_R1PF04558.151.2e-4911
ENSCSAVP00000011624tRNA_synt_1c_R1PF04558.151.2e-4911
ENSCSAVP00000011629tRNA_synt_1c_R1PF04558.154e-4911
ENSCSAVP00000011623tRNA_synt_1c_R1PF04558.152.5e-4811
ENSCSAVP00000011630tRNA_synt_1c_R1PF04558.153.3e-4811
ENSCSAVP00000011631tRNA_synt_1c_R1PF04558.153.4e-4711
ENSCSAVP00000011623tRNA-synt_1cPF00749.211.4e-10711
ENSCSAVP00000011622tRNA-synt_1cPF00749.212.5e-10711
ENSCSAVP00000011626tRNA-synt_1cPF00749.212.6e-10711
ENSCSAVP00000011628tRNA-synt_1cPF00749.212.7e-10711
ENSCSAVP00000011627tRNA-synt_1cPF00749.212.7e-10711
ENSCSAVP00000011625tRNA-synt_1cPF00749.212.8e-10711
ENSCSAVP00000011629tRNA-synt_1cPF00749.212.8e-10711
ENSCSAVP00000011624tRNA-synt_1cPF00749.212.9e-10711
ENSCSAVP00000011630tRNA-synt_1cPF00749.212.9e-10711
ENSCSAVP00000011631tRNA-synt_1cPF00749.213e-10711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000011758-2346-ENSCSAVP00000011623748 (aa)-H2Z211
ENSCSAVT00000011759-2457-ENSCSAVP00000011624785 (aa)-H2Z212
ENSCSAVT00000011766-2280-ENSCSAVP00000011631759 (aa)-H2Z219
ENSCSAVT00000011765-2280-ENSCSAVP00000011630759 (aa)-H2Z218
ENSCSAVT00000011764-2310-ENSCSAVP00000011629769 (aa)-H2Z217
ENSCSAVT00000011763-2350-ENSCSAVP00000011628769 (aa)-H2Z216
ENSCSAVT00000011762-2352-ENSCSAVP00000011627767 (aa)-H2Z215
ENSCSAVT00000011761-2351-ENSCSAVP00000011626751 (aa)-H2Z214
ENSCSAVT00000011760-2429-ENSCSAVP00000011625777 (aa)-H2Z213
ENSCSAVT00000011757-2400-ENSCSAVP00000011622761 (aa)-H2Z210
Gene Model
Click here to download ENSCSAVG00000006819's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006819's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000006819-9460.452WBGene00001336qars-110058.407Caenorhabditis_elegans
ENSCSAVG00000006819-10080.491ENSCING00000009130-9980.494Ciona_intestinalis
ENSCSAVG00000006819-9954.942FBgn0027090GlnRS9954.942Drosophila_melanogaster
ENSCSAVG00000006819-9939.412YOR168WGLN49939.535Saccharomyces_cerevisiae

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