EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006917 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8084 bases
Position: chrreftig_60:791511-799594
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011789	PDCD9	PF07147.12	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011927	-	1622	-	ENSCSAVP00000011789	471 (aa)	-	H2Z2H7

Gene Model

Click here to download ENSCSAVG00000006917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006917	-	69	30.422	ENSG00000116221	MRPL37	69	33.488	Homo_sapiens
ENSCSAVG00000006917	-	69	30.723	ENSANAG00000026524	MRPL37	70	30.723	Aotus_nancymaae
ENSCSAVG00000006917	-	80	30.366	ENSAMXG00000032982	mrpl37	81	30.366	Astyanax_mexicanus
ENSCSAVG00000006917	-	69	31.325	ENSBTAG00000010715	MRPL37	70	31.325	Bos_taurus
ENSCSAVG00000006917	-	51	34.211	ENSCJAG00000005018	MRPL37	62	34.211	Callithrix_jacchus
ENSCSAVG00000006917	-	69	30.723	ENSCAFG00020012091	MRPL37	70	30.723	Canis_lupus_dingo
ENSCSAVG00000006917	-	69	31.454	ENSCHIG00000022304	-	73	31.454	Capra_hircus
ENSCSAVG00000006917	-	69	31.157	ENSCHIG00000017117	-	70	31.157	Capra_hircus
ENSCSAVG00000006917	-	62	31.104	ENSCAPG00000005739	-	87	31.104	Cavia_aperea
ENSCSAVG00000006917	-	69	30.514	ENSCPOG00000011866	MRPL37	70	30.514	Cavia_porcellus
ENSCSAVG00000006917	-	68	31.385	ENSCCAG00000034961	MRPL37	67	33.654	Cebus_capucinus
ENSCSAVG00000006917	-	100	62.791	ENSCING00000009173	-	100	62.791	Ciona_intestinalis
ENSCSAVG00000006917	-	80	30.729	ENSCGRG00001023385	Mrpl37	80	30.729	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006917	-	80	30.729	ENSCGRG00000006208	Mrpl37	80	30.729	Cricetulus_griseus_crigri
ENSCSAVG00000006917	-	80	30.079	ENSDARG00000062916	mrpl37	77	30.079	Danio_rerio
ENSCSAVG00000006917	-	59	31.613	ENSDORG00000002294	Mrpl37	69	30.588	Dipodomys_ordii
ENSCSAVG00000006917	-	69	30.120	ENSECAG00000008987	MRPL37	56	30.120	Equus_caballus
ENSCSAVG00000006917	-	69	31.024	ENSGGOG00000010511	MRPL37	69	33.645	Gorilla_gorilla
ENSCSAVG00000006917	-	77	30.352	ENSLACG00000004225	MRPL37	76	30.352	Latimeria_chalumnae
ENSCSAVG00000006917	-	80	30.469	ENSMOCG00000016169	Mrpl37	80	30.469	Microtus_ochrogaster
ENSCSAVG00000006917	-	69	31.024	MGP_CAROLIEiJ_G0026242	Mrpl37	70	31.024	Mus_caroli
ENSCSAVG00000006917	-	80	30.208	MGP_PahariEiJ_G0028576	Mrpl37	80	30.208	Mus_pahari
ENSCSAVG00000006917	-	69	30.422	ENSNGAG00000023680	Mrpl37	70	30.422	Nannospalax_galili
ENSCSAVG00000006917	-	69	30.723	ENSNLEG00000003319	MRPL37	69	33.023	Nomascus_leucogenys
ENSCSAVG00000006917	-	73	30.337	ENSMEUG00000010112	-	100	30.337	Notamacropus_eugenii
ENSCSAVG00000006917	-	69	30.422	ENSOCUG00000011305	MRPL37	70	30.422	Oryctolagus_cuniculus
ENSCSAVG00000006917	-	69	31.343	ENSOARG00000007040	MRPL37	70	31.343	Ovis_aries
ENSCSAVG00000006917	-	69	30.723	ENSPPAG00000041416	MRPL37	70	30.723	Pan_paniscus
ENSCSAVG00000006917	-	69	30.723	ENSPTRG00000000769	MRPL37	70	30.723	Pan_troglodytes
ENSCSAVG00000006917	-	69	30.120	ENSPANG00000011981	MRPL37	69	32.710	Papio_anubis
ENSCSAVG00000006917	-	77	30.623	ENSPKIG00000010297	mrpl37	76	30.623	Paramormyrops_kingsleyae
ENSCSAVG00000006917	-	63	33.333	ENSPPYG00000001318	-	77	33.333	Pongo_abelii
ENSCSAVG00000006917	-	78	30.563	ENSPNAG00000028240	mrpl37	79	30.563	Pygocentrus_nattereri
ENSCSAVG00000006917	-	69	30.120	ENSRBIG00000040736	MRPL37	69	32.243	Rhinopithecus_bieti