EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006945 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5488 bases
Position: chrreftig_19:903471-908958
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011838	Ribosomal_L3	PF00297.22	3.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000011976	-	1230	-	ENSCSAVP00000011838	281 (aa)	-	H2Z2M6

Gene Model

Click here to download ENSCSAVG00000006945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006945	-	97	50.365	ENSG00000114686	MRPL3	99	51.634	Homo_sapiens
ENSCSAVG00000006945	-	98	47.101	ENSAPOG00000006179	mrpl3	84	46.739	Acanthochromis_polyacanthus
ENSCSAVG00000006945	-	96	50.923	ENSAMEG00000014272	MRPL3	70	50.923	Ailuropoda_melanoleuca
ENSCSAVG00000006945	-	98	47.101	ENSACIG00000015992	mrpl3	79	46.739	Amphilophus_citrinellus
ENSCSAVG00000006945	-	79	32.301	ENSACIG00000009210	-	63	32.301	Amphilophus_citrinellus
ENSCSAVG00000006945	-	98	47.101	ENSAOCG00000024456	mrpl3	79	46.739	Amphiprion_ocellaris
ENSCSAVG00000006945	-	98	47.101	ENSAPEG00000015997	mrpl3	87	46.468	Amphiprion_percula
ENSCSAVG00000006945	-	88	47.390	ENSATEG00000017145	mrpl3	79	45.818	Anabas_testudineus
ENSCSAVG00000006945	-	97	45.985	ENSAPLG00000011128	MRPL3	84	45.985	Anas_platyrhynchos
ENSCSAVG00000006945	-	97	49.451	ENSACAG00000001596	MRPL3	76	49.270	Anolis_carolinensis
ENSCSAVG00000006945	-	97	50.730	ENSANAG00000021528	-	77	50.730	Aotus_nancymaae
ENSCSAVG00000006945	-	97	47.810	ENSANAG00000023191	-	77	47.810	Aotus_nancymaae
ENSCSAVG00000006945	-	89	48.413	ENSACLG00000020843	mrpl3	79	46.014	Astatotilapia_calliptera
ENSCSAVG00000006945	-	99	47.312	ENSAMXG00000043612	mrpl3	78	47.312	Astyanax_mexicanus
ENSCSAVG00000006945	-	97	49.635	ENSBTAG00000030942	MRPL3	77	49.635	Bos_taurus
ENSCSAVG00000006945	-	84	30.924	WBGene00016142	mrps-18C	55	32.579	Caenorhabditis_elegans
ENSCSAVG00000006945	-	97	50.730	ENSCJAG00000003143	MRPL3	77	50.730	Callithrix_jacchus
ENSCSAVG00000006945	-	97	50.365	ENSCAFG00000006125	MRPL3	77	50.365	Canis_familiaris
ENSCSAVG00000006945	-	97	50.365	ENSCAFG00020027448	MRPL3	77	50.365	Canis_lupus_dingo
ENSCSAVG00000006945	-	97	49.270	ENSCHIG00000024783	MRPL3	77	49.270	Capra_hircus
ENSCSAVG00000006945	-	98	49.097	ENSTSYG00000003691	MRPL3	78	49.097	Carlito_syrichta
ENSCSAVG00000006945	-	97	46.350	ENSCAPG00000013574	MRPL3	77	46.350	Cavia_aperea
ENSCSAVG00000006945	-	97	51.825	ENSCPOG00000021216	MRPL3	77	51.825	Cavia_porcellus
ENSCSAVG00000006945	-	97	50.730	ENSCCAG00000030011	MRPL3	77	50.730	Cebus_capucinus
ENSCSAVG00000006945	-	97	51.460	ENSCATG00000038023	MRPL3	77	51.460	Cercocebus_atys
ENSCSAVG00000006945	-	97	51.460	ENSCLAG00000003513	MRPL3	77	51.460	Chinchilla_lanigera
ENSCSAVG00000006945	-	97	51.460	ENSCSAG00000010510	MRPL3	77	51.460	Chlorocebus_sabaeus
ENSCSAVG00000006945	-	97	31.022	ENSCHOG00000013862	MRPL3	77	31.022	Choloepus_hoffmanni
ENSCSAVG00000006945	-	95	50.929	ENSCPBG00000022852	MRPL3	70	51.613	Chrysemys_picta_bellii
ENSCSAVG00000006945	-	100	84.698	ENSCING00000008395	-	72	84.698	Ciona_intestinalis
ENSCSAVG00000006945	-	97	51.825	ENSCANG00000031568	MRPL3	77	51.825	Colobus_angolensis_palliatus
ENSCSAVG00000006945	-	98	49.818	ENSCGRG00001016688	Mrpl3	77	49.818	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006945	-	99	49.281	ENSCGRG00000015457	Mrpl3	67	49.281	Cricetulus_griseus_crigri
ENSCSAVG00000006945	-	100	45.035	ENSCSEG00000008636	mrpl3	73	46.875	Cynoglossus_semilaevis
ENSCSAVG00000006945	-	91	48.249	ENSCVAG00000011820	mrpl3	78	46.377	Cyprinodon_variegatus
ENSCSAVG00000006945	-	99	46.786	ENSDARG00000103318	mrpl3	79	46.786	Danio_rerio
ENSCSAVG00000006945	-	97	50.000	ENSDNOG00000047253	MRPL3	76	50.000	Dasypus_novemcinctus
ENSCSAVG00000006945	-	80	48.444	ENSDORG00000029436	Mrpl3	83	48.444	Dipodomys_ordii
ENSCSAVG00000006945	-	89	34.848	FBgn0030686	mRpL3	67	36.694	Drosophila_melanogaster
ENSCSAVG00000006945	-	99	44.086	ENSETEG00000010458	MRPL3	78	44.565	Echinops_telfairi
ENSCSAVG00000006945	-	79	46.188	ENSEBUG00000009944	mrpl3	78	46.188	Eptatretus_burgeri
ENSCSAVG00000006945	-	99	49.281	ENSEASG00005005550	MRPL3	76	49.281	Equus_asinus_asinus
ENSCSAVG00000006945	-	99	48.921	ENSECAG00000016736	MRPL3	77	49.455	Equus_caballus
ENSCSAVG00000006945	-	92	44.015	ENSEEUG00000015033	MRPL3	99	44.015	Erinaceus_europaeus
ENSCSAVG00000006945	-	90	47.059	ENSELUG00000003470	mrpl3	73	50.885	Esox_lucius
ENSCSAVG00000006945	-	97	50.365	ENSFCAG00000006335	MRPL3	77	50.365	Felis_catus
ENSCSAVG00000006945	-	97	45.985	ENSFALG00000012506	MRPL3	72	47.984	Ficedula_albicollis
ENSCSAVG00000006945	-	97	51.825	ENSFDAG00000017320	MRPL3	77	51.825	Fukomys_damarensis
ENSCSAVG00000006945	-	98	48.551	ENSFHEG00000023451	mrpl3	82	48.188	Fundulus_heteroclitus
ENSCSAVG00000006945	-	98	44.928	ENSGMOG00000017025	mrpl3	85	44.928	Gadus_morhua
ENSCSAVG00000006945	-	97	46.350	ENSGALG00000040873	MRPL3	77	46.350	Gallus_gallus
ENSCSAVG00000006945	-	96	47.985	ENSGAFG00000018445	mrpl3	77	47.619	Gambusia_affinis
ENSCSAVG00000006945	-	98	46.014	ENSGACG00000006011	mrpl3	79	45.652	Gasterosteus_aculeatus
ENSCSAVG00000006945	-	97	49.635	ENSGAGG00000019040	MRPL3	77	49.635	Gopherus_agassizii
ENSCSAVG00000006945	-	97	39.051	ENSGGOG00000025644	-	75	39.051	Gorilla_gorilla
ENSCSAVG00000006945	-	97	50.365	ENSGGOG00000011128	MRPL3	77	50.365	Gorilla_gorilla
ENSCSAVG00000006945	-	89	48.016	ENSHBUG00000019966	mrpl3	79	45.652	Haplochromis_burtoni
ENSCSAVG00000006945	-	97	51.095	ENSHGLG00000016782	MRPL3	77	51.095	Heterocephalus_glaber_female
ENSCSAVG00000006945	-	97	51.095	ENSHGLG00100014743	MRPL3	77	51.095	Heterocephalus_glaber_male
ENSCSAVG00000006945	-	95	48.134	ENSHCOG00000011011	mrpl3	72	49.600	Hippocampus_comes
ENSCSAVG00000006945	-	99	46.595	ENSIPUG00000011902	mrpl3	72	47.656	Ictalurus_punctatus
ENSCSAVG00000006945	-	99	50.000	ENSSTOG00000012804	MRPL3	78	50.000	Ictidomys_tridecemlineatus
ENSCSAVG00000006945	-	99	49.640	ENSJJAG00000006706	Mrpl3	78	49.640	Jaculus_jaculus
ENSCSAVG00000006945	-	90	49.213	ENSKMAG00000002193	mrpl3	79	47.653	Kryptolebias_marmoratus
ENSCSAVG00000006945	-	98	46.377	ENSLBEG00000000445	mrpl3	78	46.014	Labrus_bergylta
ENSCSAVG00000006945	-	96	46.691	ENSLOCG00000001514	mrpl3	68	49.784	Lepisosteus_oculatus
ENSCSAVG00000006945	-	92	49.807	ENSLAFG00000012176	MRPL3	77	50.730	Loxodonta_africana
ENSCSAVG00000006945	-	97	51.460	ENSMFAG00000003455	MRPL3	77	51.460	Macaca_fascicularis
ENSCSAVG00000006945	-	97	51.460	ENSMMUG00000000220	MRPL3	77	51.460	Macaca_mulatta
ENSCSAVG00000006945	-	97	51.825	ENSMNEG00000042711	MRPL3	77	51.825	Macaca_nemestrina
ENSCSAVG00000006945	-	97	51.460	ENSMLEG00000029925	MRPL3	77	51.460	Mandrillus_leucophaeus
ENSCSAVG00000006945	-	98	47.826	ENSMAMG00000010715	mrpl3	79	47.464	Mastacembelus_armatus
ENSCSAVG00000006945	-	89	48.413	ENSMZEG00005006750	mrpl3	79	46.014	Maylandia_zebra
ENSCSAVG00000006945	-	99	45.196	ENSMGAG00000011444	MRPL3	87	45.196	Meleagris_gallopavo
ENSCSAVG00000006945	-	98	50.182	ENSMAUG00000006653	Mrpl3	77	50.182	Mesocricetus_auratus
ENSCSAVG00000006945	-	97	46.715	ENSMICG00000033138	-	78	46.715	Microcebus_murinus
ENSCSAVG00000006945	-	97	50.000	ENSMICG00000049541	-	77	50.000	Microcebus_murinus
ENSCSAVG00000006945	-	99	50.360	ENSMOCG00000019372	Mrpl3	78	50.360	Microtus_ochrogaster
ENSCSAVG00000006945	-	78	52.252	ENSMMOG00000019894	mrpl3	71	52.252	Mola_mola
ENSCSAVG00000006945	-	97	49.455	ENSMODG00000011873	MRPL3	69	50.806	Monodelphis_domestica
ENSCSAVG00000006945	-	98	48.746	ENSMALG00000017620	mrpl3	82	48.014	Monopterus_albus
ENSCSAVG00000006945	-	99	49.640	MGP_CAROLIEiJ_G0032601	Mrpl3	78	49.640	Mus_caroli
ENSCSAVG00000006945	-	99	49.640	ENSMUSG00000032563	Mrpl3	78	49.640	Mus_musculus
ENSCSAVG00000006945	-	98	50.545	MGP_PahariEiJ_G0015469	Mrpl3	77	50.545	Mus_pahari
ENSCSAVG00000006945	-	99	49.281	MGP_SPRETEiJ_G0033747	Mrpl3	78	49.281	Mus_spretus
ENSCSAVG00000006945	-	97	50.000	ENSMPUG00000010052	MRPL3	77	50.000	Mustela_putorius_furo
ENSCSAVG00000006945	-	97	48.736	ENSMLUG00000008515	MRPL3	77	48.736	Myotis_lucifugus
ENSCSAVG00000006945	-	99	49.281	ENSNGAG00000010660	Mrpl3	78	49.281	Nannospalax_galili
ENSCSAVG00000006945	-	89	48.413	ENSNBRG00000009401	mrpl3	79	46.014	Neolamprologus_brichardi
ENSCSAVG00000006945	-	97	51.460	ENSNLEG00000002810	MRPL3	77	51.460	Nomascus_leucogenys
ENSCSAVG00000006945	-	97	41.455	ENSMEUG00000016391	MRPL3	85	41.455	Notamacropus_eugenii
ENSCSAVG00000006945	-	97	45.620	ENSOPRG00000000501	MRPL3	84	45.620	Ochotona_princeps
ENSCSAVG00000006945	-	82	51.948	ENSODEG00000018142	-	74	51.948	Octodon_degus
ENSCSAVG00000006945	-	97	50.730	ENSODEG00000018670	-	77	50.730	Octodon_degus
ENSCSAVG00000006945	-	89	48.810	ENSONIG00000002051	mrpl3	63	48.800	Oreochromis_niloticus
ENSCSAVG00000006945	-	87	49.388	ENSOANG00000006770	MRPL3	98	49.388	Ornithorhynchus_anatinus
ENSCSAVG00000006945	-	99	49.640	ENSOCUG00000002951	MRPL3	78	49.640	Oryctolagus_cuniculus
ENSCSAVG00000006945	-	98	46.403	ENSORLG00000003736	mrpl3	79	46.043	Oryzias_latipes
ENSCSAVG00000006945	-	97	46.182	ENSORLG00020002193	mrpl3	79	46.545	Oryzias_latipes_hni
ENSCSAVG00000006945	-	97	46.545	ENSORLG00015012654	mrpl3	79	46.182	Oryzias_latipes_hsok
ENSCSAVG00000006945	-	98	46.377	ENSOMEG00000015235	mrpl3	79	46.014	Oryzias_melastigma
ENSCSAVG00000006945	-	97	50.000	ENSOGAG00000016133	MRPL3	73	50.000	Otolemur_garnettii
ENSCSAVG00000006945	-	97	49.270	ENSOARG00000009221	MRPL3	73	49.270	Ovis_aries
ENSCSAVG00000006945	-	97	50.000	ENSPPAG00000015358	MRPL3	77	50.000	Pan_paniscus
ENSCSAVG00000006945	-	97	41.281	ENSPPAG00000034479	-	74	44.664	Pan_paniscus
ENSCSAVG00000006945	-	97	50.365	ENSPPRG00000015417	MRPL3	77	50.365	Panthera_pardus
ENSCSAVG00000006945	-	99	49.640	ENSPTIG00000012251	MRPL3	72	49.640	Panthera_tigris_altaica
ENSCSAVG00000006945	-	90	44.664	ENSPTRG00000045519	-	74	44.664	Pan_troglodytes
ENSCSAVG00000006945	-	97	50.365	ENSPTRG00000015396	MRPL3	77	50.365	Pan_troglodytes
ENSCSAVG00000006945	-	97	51.460	ENSPANG00000017085	MRPL3	77	51.460	Papio_anubis
ENSCSAVG00000006945	-	98	46.739	ENSPKIG00000023678	mrpl3	78	46.209	Paramormyrops_kingsleyae
ENSCSAVG00000006945	-	85	49.583	ENSPSIG00000002908	MRPL3	88	50.228	Pelodiscus_sinensis
ENSCSAVG00000006945	-	99	45.035	ENSPMGG00000023558	mrpl3	88	45.455	Periophthalmus_magnuspinnatus
ENSCSAVG00000006945	-	99	50.719	ENSPEMG00000012061	Mrpl3	78	50.719	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006945	-	99	44.128	ENSPMAG00000003407	mrpl3	78	45.098	Petromyzon_marinus
ENSCSAVG00000006945	-	97	49.818	ENSPCIG00000023992	MRPL3	79	49.818	Phascolarctos_cinereus
ENSCSAVG00000006945	-	96	47.810	ENSPFOG00000002850	mrpl3	78	47.445	Poecilia_formosa
ENSCSAVG00000006945	-	96	47.985	ENSPLAG00000002981	mrpl3	77	47.619	Poecilia_latipinna
ENSCSAVG00000006945	-	96	47.985	ENSPMEG00000002060	mrpl3	77	47.619	Poecilia_mexicana
ENSCSAVG00000006945	-	98	47.101	ENSPREG00000003943	mrpl3	78	46.739	Poecilia_reticulata
ENSCSAVG00000006945	-	97	49.270	ENSPPYG00000014102	MRPL3	77	49.270	Pongo_abelii
ENSCSAVG00000006945	-	97	36.131	ENSPCAG00000008624	MRPL3	77	36.131	Procavia_capensis
ENSCSAVG00000006945	-	97	50.365	ENSPCOG00000017228	MRPL3	77	50.365	Propithecus_coquereli
ENSCSAVG00000006945	-	97	49.635	ENSPVAG00000012966	MRPL3	77	49.635	Pteropus_vampyrus
ENSCSAVG00000006945	-	89	47.222	ENSPNYG00000008358	mrpl3	79	44.928	Pundamilia_nyererei
ENSCSAVG00000006945	-	97	47.636	ENSPNAG00000000723	mrpl3	78	47.636	Pygocentrus_nattereri
ENSCSAVG00000006945	-	99	50.360	ENSRNOG00000012650	Mrpl3	78	50.360	Rattus_norvegicus
ENSCSAVG00000006945	-	97	51.460	ENSRBIG00000033474	MRPL3	77	51.460	Rhinopithecus_bieti
ENSCSAVG00000006945	-	97	51.460	ENSRROG00000040393	MRPL3	77	51.460	Rhinopithecus_roxellana
ENSCSAVG00000006945	-	75	32.407	YGR220C	MRPL9	79	32.407	Saccharomyces_cerevisiae
ENSCSAVG00000006945	-	97	51.095	ENSSBOG00000021018	MRPL3	77	51.095	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006945	-	99	47.312	ENSSHAG00000000330	MRPL3	85	46.237	Sarcophilus_harrisii
ENSCSAVG00000006945	-	98	48.551	ENSSFOG00015023683	mrpl3	77	49.609	Scleropages_formosus
ENSCSAVG00000006945	-	98	46.377	ENSSMAG00000011689	mrpl3	79	46.014	Scophthalmus_maximus
ENSCSAVG00000006945	-	91	49.805	ENSSDUG00000007598	mrpl3	79	47.826	Seriola_dumerili
ENSCSAVG00000006945	-	91	49.416	ENSSLDG00000008264	mrpl3	79	47.464	Seriola_lalandi_dorsalis
ENSCSAVG00000006945	-	97	38.321	ENSSARG00000003782	MRPL3	64	41.818	Sorex_araneus
ENSCSAVG00000006945	-	97	49.270	ENSSPUG00000002872	MRPL3	76	49.270	Sphenodon_punctatus
ENSCSAVG00000006945	-	98	48.188	ENSSPAG00000021726	mrpl3	79	47.826	Stegastes_partitus
ENSCSAVG00000006945	-	97	49.635	ENSSSCG00000011179	MRPL3	67	49.635	Sus_scrofa
ENSCSAVG00000006945	-	87	44.898	ENSTGUG00000004204	-	98	44.898	Taeniopygia_guttata
ENSCSAVG00000006945	-	97	47.636	ENSTRUG00000009650	mrpl3	80	47.273	Takifugu_rubripes
ENSCSAVG00000006945	-	97	46.739	ENSTNIG00000006434	mrpl3	80	47.101	Tetraodon_nigroviridis
ENSCSAVG00000006945	-	97	44.891	ENSTTRG00000010358	MRPL3	77	44.891	Tursiops_truncatus
ENSCSAVG00000006945	-	97	50.365	ENSUAMG00000000526	MRPL3	76	50.365	Ursus_americanus
ENSCSAVG00000006945	-	97	50.365	ENSUMAG00000017621	MRPL3	69	50.365	Ursus_maritimus
ENSCSAVG00000006945	-	97	33.942	ENSVPAG00000012253	MRPL3	85	33.942	Vicugna_pacos
ENSCSAVG00000006945	-	97	50.365	ENSVVUG00000002847	MRPL3	77	50.365	Vulpes_vulpes
ENSCSAVG00000006945	-	96	45.018	ENSXETG00000001845	mrpl3	77	45.018	Xenopus_tropicalis
ENSCSAVG00000006945	-	86	47.755	ENSXCOG00000020178	mrpl3	75	47.826	Xiphophorus_couchianus
ENSCSAVG00000006945	-	91	48.638	ENSXMAG00000002586	mrpl3	77	46.886	Xiphophorus_maculatus