EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000006970 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4650 bases
Position: chrreftig_25:239778-244427
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011871	RIO1	PF01163.22	8.4e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012009	-	1570	-	ENSCSAVP00000011871	499 (aa)	-	H2Z2Q9

Gene Model

Click here to download ENSCSAVG00000006970's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000006970's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000006970	-	99	50.092	ENSG00000058729	RIOK2	98	52.034	Homo_sapiens
ENSCSAVG00000006970	-	62	66.558	ENSAPOG00000011797	riok2	99	49.351	Acanthochromis_polyacanthus
ENSCSAVG00000006970	-	99	51.654	ENSAMEG00000014615	RIOK2	99	51.654	Ailuropoda_melanoleuca
ENSCSAVG00000006970	-	78	44.907	ENSACIG00000020646	riok2	99	44.306	Amphilophus_citrinellus
ENSCSAVG00000006970	-	62	66.883	ENSAOCG00000021840	riok2	99	49.631	Amphiprion_ocellaris
ENSCSAVG00000006970	-	62	67.532	ENSAPEG00000020853	riok2	99	50.000	Amphiprion_percula
ENSCSAVG00000006970	-	100	48.250	ENSATEG00000005671	riok2	99	50.474	Anabas_testudineus
ENSCSAVG00000006970	-	100	52.390	ENSACAG00000011858	RIOK2	99	52.390	Anolis_carolinensis
ENSCSAVG00000006970	-	99	51.009	ENSANAG00000015977	RIOK2	99	51.009	Aotus_nancymaae
ENSCSAVG00000006970	-	100	49.527	ENSACLG00000002755	riok2	99	50.189	Astatotilapia_calliptera
ENSCSAVG00000006970	-	99	51.613	ENSAMXG00000002368	riok2	99	51.803	Astyanax_mexicanus
ENSCSAVG00000006970	-	99	51.009	ENSBTAG00000011763	RIOK2	99	51.009	Bos_taurus
ENSCSAVG00000006970	-	65	55.090	WBGene00013688	riok-2	65	55.233	Caenorhabditis_elegans
ENSCSAVG00000006970	-	100	50.549	ENSCJAG00000040045	RIOK2	99	50.549	Callithrix_jacchus
ENSCSAVG00000006970	-	99	51.292	ENSCAFG00000007745	RIOK2	99	51.292	Canis_familiaris
ENSCSAVG00000006970	-	65	57.185	ENSCAFG00020015532	-	94	57.185	Canis_lupus_dingo
ENSCSAVG00000006970	-	99	50.640	ENSCAFG00020011453	-	99	50.738	Canis_lupus_dingo
ENSCSAVG00000006970	-	100	50.000	ENSCHIG00000016709	RIOK2	99	50.000	Capra_hircus
ENSCSAVG00000006970	-	99	48.998	ENSTSYG00000001916	RIOK2	99	48.998	Carlito_syrichta
ENSCSAVG00000006970	-	96	48.718	ENSCAPG00000006762	RIOK2	99	48.718	Cavia_aperea
ENSCSAVG00000006970	-	100	50.547	ENSCPOG00000010551	RIOK2	99	50.547	Cavia_porcellus
ENSCSAVG00000006970	-	100	50.000	ENSCCAG00000025712	RIOK2	99	50.276	Cebus_capucinus
ENSCSAVG00000006970	-	99	50.092	ENSCATG00000035047	RIOK2	99	49.818	Cercocebus_atys
ENSCSAVG00000006970	-	100	50.730	ENSCLAG00000006790	RIOK2	99	50.730	Chinchilla_lanigera
ENSCSAVG00000006970	-	65	47.312	ENSCSAG00000014233	RIOK2	99	47.312	Chlorocebus_sabaeus
ENSCSAVG00000006970	-	79	58.462	ENSCHOG00000003803	RIOK2	81	58.462	Choloepus_hoffmanni
ENSCSAVG00000006970	-	100	50.633	ENSCPBG00000015732	RIOK2	99	50.633	Chrysemys_picta_bellii
ENSCSAVG00000006970	-	99	69.380	ENSCING00000002364	-	99	71.961	Ciona_intestinalis
ENSCSAVG00000006970	-	100	45.753	ENSCANG00000042169	RIOK2	68	69.198	Colobus_angolensis_palliatus
ENSCSAVG00000006970	-	99	50.092	ENSCGRG00001000871	Riok2	99	50.092	Cricetulus_griseus_chok1gshd
ENSCSAVG00000006970	-	99	50.092	ENSCGRG00000008541	Riok2	99	50.092	Cricetulus_griseus_crigri
ENSCSAVG00000006970	-	100	50.290	ENSCSEG00000014204	riok2	99	51.238	Cynoglossus_semilaevis
ENSCSAVG00000006970	-	100	49.081	ENSCVAG00000012034	riok2	99	51.407	Cyprinodon_variegatus
ENSCSAVG00000006970	-	100	51.894	ENSDARG00000035264	riok2	99	51.894	Danio_rerio
ENSCSAVG00000006970	-	99	48.917	ENSDNOG00000037305	RIOK2	99	50.092	Dasypus_novemcinctus
ENSCSAVG00000006970	-	100	50.092	ENSDORG00000016345	Riok2	99	50.092	Dipodomys_ordii
ENSCSAVG00000006970	-	99	42.596	FBgn0039306	RIOK2	100	43.438	Drosophila_melanogaster
ENSCSAVG00000006970	-	54	75.728	ENSETEG00000013220	-	73	75.728	Echinops_telfairi
ENSCSAVG00000006970	-	58	62.718	ENSEBUG00000006099	riok2	50	62.718	Eptatretus_burgeri
ENSCSAVG00000006970	-	99	51.193	ENSEASG00005018799	RIOK2	99	51.193	Equus_asinus_asinus
ENSCSAVG00000006970	-	99	50.551	ENSECAG00000018441	RIOK2	99	50.551	Equus_caballus
ENSCSAVG00000006970	-	87	47.959	ENSEEUG00000013535	RIOK2	88	47.959	Erinaceus_europaeus
ENSCSAVG00000006970	-	76	69.338	ENSELUG00000011239	riok2	99	46.535	Esox_lucius
ENSCSAVG00000006970	-	99	50.183	ENSFCAG00000024077	RIOK2	99	50.183	Felis_catus
ENSCSAVG00000006970	-	59	66.102	ENSFALG00000010277	RIOK2	99	47.269	Ficedula_albicollis
ENSCSAVG00000006970	-	100	51.099	ENSFDAG00000015288	RIOK2	99	51.099	Fukomys_damarensis
ENSCSAVG00000006970	-	100	50.766	ENSFHEG00000010950	riok2	99	51.243	Fundulus_heteroclitus
ENSCSAVG00000006970	-	62	65.372	ENSGMOG00000011354	riok2	99	50.577	Gadus_morhua
ENSCSAVG00000006970	-	100	49.733	ENSGALG00000015288	RIOK2	99	49.733	Gallus_gallus
ENSCSAVG00000006970	-	62	67.857	ENSGAFG00000012056	riok2	99	50.484	Gambusia_affinis
ENSCSAVG00000006970	-	100	49.509	ENSGACG00000009754	riok2	99	49.904	Gasterosteus_aculeatus
ENSCSAVG00000006970	-	100	51.444	ENSGAGG00000013791	RIOK2	99	51.444	Gopherus_agassizii
ENSCSAVG00000006970	-	99	50.092	ENSGGOG00000022136	RIOK2	99	50.092	Gorilla_gorilla
ENSCSAVG00000006970	-	100	49.318	ENSHBUG00000010705	riok2	99	50.980	Haplochromis_burtoni
ENSCSAVG00000006970	-	99	51.107	ENSHGLG00000009139	-	99	51.107	Heterocephalus_glaber_female
ENSCSAVG00000006970	-	99	51.107	ENSHGLG00100014700	RIOK2	99	51.107	Heterocephalus_glaber_male
ENSCSAVG00000006970	-	100	51.631	ENSHCOG00000015555	riok2	99	51.711	Hippocampus_comes
ENSCSAVG00000006970	-	99	51.638	ENSIPUG00000007450	riok2	99	52.216	Ictalurus_punctatus
ENSCSAVG00000006970	-	99	50.276	ENSSTOG00000006659	RIOK2	99	50.276	Ictidomys_tridecemlineatus
ENSCSAVG00000006970	-	100	48.995	ENSJJAG00000016582	Riok2	99	48.995	Jaculus_jaculus
ENSCSAVG00000006970	-	62	67.532	ENSKMAG00000013229	riok2	99	50.095	Kryptolebias_marmoratus
ENSCSAVG00000006970	-	100	48.872	ENSLBEG00000015421	riok2	99	48.872	Labrus_bergylta
ENSCSAVG00000006970	-	100	48.094	ENSLACG00000000274	RIOK2	99	49.183	Latimeria_chalumnae
ENSCSAVG00000006970	-	100	51.145	ENSLOCG00000006432	riok2	99	51.908	Lepisosteus_oculatus
ENSCSAVG00000006970	-	99	50.275	ENSLAFG00000000919	RIOK2	99	50.275	Loxodonta_africana
ENSCSAVG00000006970	-	99	50.092	ENSMFAG00000033056	RIOK2	99	50.092	Macaca_fascicularis
ENSCSAVG00000006970	-	99	50.275	ENSMMUG00000000307	RIOK2	99	50.275	Macaca_mulatta
ENSCSAVG00000006970	-	99	50.275	ENSMNEG00000029708	RIOK2	99	50.275	Macaca_nemestrina
ENSCSAVG00000006970	-	86	47.619	ENSMLEG00000040038	RIOK2	98	47.619	Mandrillus_leucophaeus
ENSCSAVG00000006970	-	100	48.315	ENSMAMG00000013310	riok2	99	48.876	Mastacembelus_armatus
ENSCSAVG00000006970	-	100	48.694	ENSMZEG00005017067	riok2	99	49.159	Maylandia_zebra
ENSCSAVG00000006970	-	96	48.991	ENSMGAG00000006986	RIOK2	99	49.358	Meleagris_gallopavo
ENSCSAVG00000006970	-	74	68.182	ENSMAUG00000019527	Riok2	98	68.182	Mesocricetus_auratus
ENSCSAVG00000006970	-	100	49.091	ENSMICG00000037437	RIOK2	99	49.091	Microcebus_murinus
ENSCSAVG00000006970	-	99	51.685	ENSMOCG00000004230	Riok2	99	51.685	Microtus_ochrogaster
ENSCSAVG00000006970	-	62	67.857	ENSMMOG00000018155	riok2	99	49.721	Mola_mola
ENSCSAVG00000006970	-	99	50.545	ENSMODG00000015548	RIOK2	99	50.545	Monodelphis_domestica
ENSCSAVG00000006970	-	100	50.847	ENSMALG00000011266	riok2	99	51.040	Monopterus_albus
ENSCSAVG00000006970	-	100	50.000	ENSMUSG00000116564	Riok2	99	69.531	Mus_musculus
ENSCSAVG00000006970	-	99	50.551	ENSMPUG00000004450	RIOK2	99	50.551	Mustela_putorius_furo
ENSCSAVG00000006970	-	99	51.013	ENSMLUG00000016113	RIOK2	99	51.013	Myotis_lucifugus
ENSCSAVG00000006970	-	99	50.182	ENSNGAG00000017971	Riok2	99	50.542	Nannospalax_galili
ENSCSAVG00000006970	-	99	50.000	ENSNLEG00000014474	RIOK2	99	50.000	Nomascus_leucogenys
ENSCSAVG00000006970	-	92	42.227	ENSMEUG00000010529	RIOK2	96	42.227	Notamacropus_eugenii
ENSCSAVG00000006970	-	100	49.140	ENSONIG00000013689	riok2	99	49.522	Oreochromis_niloticus
ENSCSAVG00000006970	-	95	48.467	ENSOANG00000001225	RIOK2	98	48.289	Ornithorhynchus_anatinus
ENSCSAVG00000006970	-	100	50.182	ENSOCUG00000001656	RIOK2	99	50.182	Oryctolagus_cuniculus
ENSCSAVG00000006970	-	62	66.883	ENSORLG00020011553	riok2	99	51.048	Oryzias_latipes_hni
ENSCSAVG00000006970	-	62	66.558	ENSORLG00015001085	riok2	99	50.482	Oryzias_latipes_hsok
ENSCSAVG00000006970	-	62	67.532	ENSOMEG00000004617	riok2	99	52.031	Oryzias_melastigma
ENSCSAVG00000006970	-	100	47.780	ENSOGAG00000008467	RIOK2	99	47.780	Otolemur_garnettii
ENSCSAVG00000006970	-	100	50.181	ENSOARG00000018138	RIOK2	99	50.181	Ovis_aries
ENSCSAVG00000006970	-	100	46.751	ENSPPAG00000027414	RIOK2	99	46.727	Pan_paniscus
ENSCSAVG00000006970	-	99	50.000	ENSPPRG00000000169	RIOK2	99	50.000	Panthera_pardus
ENSCSAVG00000006970	-	99	49.817	ENSPTIG00000008344	RIOK2	99	49.817	Panthera_tigris_altaica
ENSCSAVG00000006970	-	99	49.541	ENSPTRG00000017100	RIOK2	99	49.541	Pan_troglodytes
ENSCSAVG00000006970	-	99	50.092	ENSPANG00000011977	RIOK2	99	50.092	Papio_anubis
ENSCSAVG00000006970	-	100	48.545	ENSPKIG00000016220	riok2	99	50.000	Paramormyrops_kingsleyae
ENSCSAVG00000006970	-	100	51.356	ENSPSIG00000013238	RIOK2	99	51.356	Pelodiscus_sinensis
ENSCSAVG00000006970	-	99	51.663	ENSPMGG00000021822	riok2	99	51.969	Periophthalmus_magnuspinnatus
ENSCSAVG00000006970	-	99	49.908	ENSPEMG00000018872	Riok2	99	49.908	Peromyscus_maniculatus_bairdii
ENSCSAVG00000006970	-	100	49.624	ENSPFOG00000017064	riok2	99	49.436	Poecilia_formosa
ENSCSAVG00000006970	-	62	67.857	ENSPLAG00000003043	riok2	99	50.577	Poecilia_latipinna
ENSCSAVG00000006970	-	62	68.182	ENSPMEG00000007622	riok2	99	51.060	Poecilia_mexicana
ENSCSAVG00000006970	-	63	68.038	ENSPREG00000002255	riok2	99	51.149	Poecilia_reticulata
ENSCSAVG00000006970	-	99	49.725	ENSPPYG00000015654	RIOK2	99	49.725	Pongo_abelii
ENSCSAVG00000006970	-	100	49.009	ENSPCAG00000006508	RIOK2	99	49.091	Procavia_capensis
ENSCSAVG00000006970	-	100	48.727	ENSPCOG00000024315	RIOK2	99	48.909	Propithecus_coquereli
ENSCSAVG00000006970	-	87	57.143	ENSPVAG00000016658	RIOK2	80	57.143	Pteropus_vampyrus
ENSCSAVG00000006970	-	100	49.518	ENSPNYG00000018868	riok2	99	50.193	Pundamilia_nyererei
ENSCSAVG00000006970	-	100	53.019	ENSPNAG00000010841	riok2	99	53.019	Pygocentrus_nattereri
ENSCSAVG00000006970	-	100	50.273	ENSRNOG00000012692	Riok2	99	50.273	Rattus_norvegicus
ENSCSAVG00000006970	-	99	50.092	ENSRBIG00000030658	RIOK2	99	50.092	Rhinopithecus_bieti
ENSCSAVG00000006970	-	99	50.092	ENSRROG00000039203	RIOK2	99	50.092	Rhinopithecus_roxellana
ENSCSAVG00000006970	-	71	41.710	YNL207W	-	91	41.710	Saccharomyces_cerevisiae
ENSCSAVG00000006970	-	99	51.560	ENSSBOG00000032152	RIOK2	99	51.376	Saimiri_boliviensis_boliviensis
ENSCSAVG00000006970	-	99	49.819	ENSSHAG00000006935	-	99	49.458	Sarcophilus_harrisii
ENSCSAVG00000006970	-	97	51.992	ENSSFOG00015005966	riok2	97	52.182	Scleropages_formosus
ENSCSAVG00000006970	-	62	68.506	ENSSMAG00000010529	riok2	99	49.721	Scophthalmus_maximus
ENSCSAVG00000006970	-	62	67.208	ENSSDUG00000014891	riok2	99	52.207	Seriola_dumerili
ENSCSAVG00000006970	-	62	67.208	ENSSLDG00000001926	riok2	99	51.894	Seriola_lalandi_dorsalis
ENSCSAVG00000006970	-	100	44.860	ENSSARG00000001798	RIOK2	99	44.860	Sorex_araneus
ENSCSAVG00000006970	-	66	63.905	ENSSPUG00000003509	RIOK2	81	63.905	Sphenodon_punctatus
ENSCSAVG00000006970	-	57	66.549	ENSSPAG00000016554	riok2	99	49.194	Stegastes_partitus
ENSCSAVG00000006970	-	62	67.857	ENSTRUG00000011455	riok2	99	50.093	Takifugu_rubripes
ENSCSAVG00000006970	-	79	45.794	ENSTNIG00000015401	riok2	99	46.698	Tetraodon_nigroviridis
ENSCSAVG00000006970	-	99	48.991	ENSTTRG00000010640	RIOK2	99	48.991	Tursiops_truncatus
ENSCSAVG00000006970	-	94	50.672	ENSUAMG00000008585	RIOK2	98	50.672	Ursus_americanus
ENSCSAVG00000006970	-	99	51.376	ENSUMAG00000006726	RIOK2	99	51.376	Ursus_maritimus
ENSCSAVG00000006970	-	87	71.939	ENSVPAG00000001542	RIOK2	87	71.939	Vicugna_pacos
ENSCSAVG00000006970	-	99	50.735	ENSVVUG00000020170	RIOK2	99	50.735	Vulpes_vulpes
ENSCSAVG00000006970	-	100	50.000	ENSXETG00000013194	riok2	99	50.741	Xenopus_tropicalis
ENSCSAVG00000006970	-	100	50.881	ENSXCOG00000016879	riok2	99	50.881	Xiphophorus_couchianus
ENSCSAVG00000006970	-	100	50.581	ENSXMAG00000007425	riok2	99	50.769	Xiphophorus_maculatus