EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007005 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 924 bases
Position: chrreftig_318:36524-37447
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011925	Ribosomal_L4	PF00573.22	3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012063	-	924	-	ENSCSAVP00000011925	308 (aa)	-	H2Z2W3

Gene Model

Click here to download ENSCSAVG00000007005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007005	-	83	39.080	ENSG00000105364	MRPL4	98	47.009	Homo_sapiens
ENSCSAVG00000007005	-	96	33.221	ENSAPOG00000010156	mrpl4	98	33.221	Acanthochromis_polyacanthus
ENSCSAVG00000007005	-	85	39.163	ENSAMEG00000011808	MRPL4	88	39.163	Ailuropoda_melanoleuca
ENSCSAVG00000007005	-	80	36.992	ENSACIG00000011523	mrpl4	93	34.629	Amphilophus_citrinellus
ENSCSAVG00000007005	-	94	33.218	ENSAOCG00000018507	mrpl4	89	33.218	Amphiprion_ocellaris
ENSCSAVG00000007005	-	98	32.566	ENSAPEG00000006208	mrpl4	99	32.566	Amphiprion_percula
ENSCSAVG00000007005	-	99	34.091	ENSATEG00000021694	mrpl4	99	34.091	Anabas_testudineus
ENSCSAVG00000007005	-	83	37.838	ENSACAG00000008232	MRPL4	86	37.838	Anolis_carolinensis
ENSCSAVG00000007005	-	81	40.161	ENSANAG00000025428	MRPL4	87	40.161	Aotus_nancymaae
ENSCSAVG00000007005	-	95	34.130	ENSACLG00000017038	mrpl4	96	34.130	Astatotilapia_calliptera
ENSCSAVG00000007005	-	77	38.494	ENSAMXG00000002236	mrpl4	79	38.494	Astyanax_mexicanus
ENSCSAVG00000007005	-	72	36.797	WBGene00020717	mrpl-4	76	36.797	Caenorhabditis_elegans
ENSCSAVG00000007005	-	81	40.562	ENSCJAG00000005764	MRPL4	85	40.562	Callithrix_jacchus
ENSCSAVG00000007005	-	81	40.964	ENSCAFG00000017881	MRPL4	85	40.964	Canis_familiaris
ENSCSAVG00000007005	-	81	40.964	ENSCAFG00020024405	MRPL4	83	40.964	Canis_lupus_dingo
ENSCSAVG00000007005	-	88	36.691	ENSCHIG00000000516	MRPL4	94	36.691	Capra_hircus
ENSCSAVG00000007005	-	81	39.841	ENSTSYG00000034805	MRPL4	85	39.841	Carlito_syrichta
ENSCSAVG00000007005	-	65	41.089	ENSCAPG00000000036	MRPL4	100	41.089	Cavia_aperea
ENSCSAVG00000007005	-	85	38.577	ENSCPOG00000006506	MRPL4	89	38.577	Cavia_porcellus
ENSCSAVG00000007005	-	81	40.161	ENSCLAG00000004552	MRPL4	85	40.161	Chinchilla_lanigera
ENSCSAVG00000007005	-	85	38.931	ENSCSAG00000007362	MRPL4	88	38.931	Chlorocebus_sabaeus
ENSCSAVG00000007005	-	83	38.911	ENSCPBG00000005432	MRPL4	99	39.442	Chrysemys_picta_bellii
ENSCSAVG00000007005	-	100	64.194	ENSCING00000003144	-	99	64.194	Ciona_intestinalis
ENSCSAVG00000007005	-	81	42.000	ENSCGRG00001013642	Mrpl4	85	42.000	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007005	-	81	42.000	ENSCGRG00000012922	Mrpl4	85	42.000	Cricetulus_griseus_crigri
ENSCSAVG00000007005	-	83	36.965	ENSCSEG00000020580	mrpl4	98	35.430	Cynoglossus_semilaevis
ENSCSAVG00000007005	-	99	37.013	ENSDARG00000058824	mrpl4	99	37.013	Danio_rerio
ENSCSAVG00000007005	-	79	35.656	ENSDNOG00000044263	-	86	35.200	Dasypus_novemcinctus
ENSCSAVG00000007005	-	81	33.466	ENSDNOG00000010139	-	87	33.466	Dasypus_novemcinctus
ENSCSAVG00000007005	-	83	39.300	ENSDORG00000003723	Mrpl4	99	39.300	Dipodomys_ordii
ENSCSAVG00000007005	-	90	34.409	FBgn0001995	mRpL4	90	34.409	Drosophila_melanogaster
ENSCSAVG00000007005	-	76	41.525	ENSETEG00000002009	MRPL4	79	41.525	Echinops_telfairi
ENSCSAVG00000007005	-	79	41.393	ENSEBUG00000016597	mrpl4	79	41.393	Eptatretus_burgeri
ENSCSAVG00000007005	-	81	38.153	ENSEASG00005010556	MRPL4	83	38.153	Equus_asinus_asinus
ENSCSAVG00000007005	-	81	38.153	ENSECAG00000017013	MRPL4	83	38.153	Equus_caballus
ENSCSAVG00000007005	-	90	35.816	ENSELUG00000010463	mrpl4	91	35.816	Esox_lucius
ENSCSAVG00000007005	-	73	37.778	ENSFCAG00000043071	MRPL4	85	37.778	Felis_catus
ENSCSAVG00000007005	-	69	40.845	ENSFDAG00000001936	MRPL4	94	40.845	Fukomys_damarensis
ENSCSAVG00000007005	-	96	34.228	ENSFHEG00000003126	mrpl4	98	34.228	Fundulus_heteroclitus
ENSCSAVG00000007005	-	83	35.938	ENSGMOG00000007229	mrpl4	90	35.938	Gadus_morhua
ENSCSAVG00000007005	-	96	34.228	ENSGAFG00000018136	mrpl4	98	34.228	Gambusia_affinis
ENSCSAVG00000007005	-	98	32.353	ENSGACG00000019808	mrpl4	99	32.353	Gasterosteus_aculeatus
ENSCSAVG00000007005	-	86	36.704	ENSGAGG00000018010	MRPL4	88	36.704	Gopherus_agassizii
ENSCSAVG00000007005	-	83	38.697	ENSGGOG00000036529	-	84	38.697	Gorilla_gorilla
ENSCSAVG00000007005	-	95	34.130	ENSHBUG00000006332	mrpl4	96	34.130	Haplochromis_burtoni
ENSCSAVG00000007005	-	81	39.357	ENSHGLG00000007839	MRPL4	84	39.357	Heterocephalus_glaber_female
ENSCSAVG00000007005	-	89	38.214	ENSHGLG00100002720	MRPL4	99	38.214	Heterocephalus_glaber_male
ENSCSAVG00000007005	-	92	35.106	ENSHCOG00000002016	mrpl4	94	36.644	Hippocampus_comes
ENSCSAVG00000007005	-	81	37.302	ENSIPUG00000011705	mrpl4	80	37.302	Ictalurus_punctatus
ENSCSAVG00000007005	-	56	44.767	ENSSTOG00000030121	MRPL4	86	44.767	Ictidomys_tridecemlineatus
ENSCSAVG00000007005	-	81	42.629	ENSJJAG00000010573	Mrpl4	85	42.629	Jaculus_jaculus
ENSCSAVG00000007005	-	95	35.154	ENSKMAG00000012769	mrpl4	95	35.154	Kryptolebias_marmoratus
ENSCSAVG00000007005	-	97	33.667	ENSLBEG00000000848	mrpl4	98	33.667	Labrus_bergylta
ENSCSAVG00000007005	-	92	36.268	ENSLACG00000009255	MRPL4	85	36.268	Latimeria_chalumnae
ENSCSAVG00000007005	-	99	34.194	ENSLOCG00000016632	mrpl4	99	34.194	Lepisosteus_oculatus
ENSCSAVG00000007005	-	82	38.976	ENSLAFG00000015366	MRPL4	85	38.976	Loxodonta_africana
ENSCSAVG00000007005	-	85	39.313	ENSMFAG00000003526	MRPL4	85	38.496	Macaca_fascicularis
ENSCSAVG00000007005	-	85	39.313	ENSMMUG00000001219	MRPL4	88	39.313	Macaca_mulatta
ENSCSAVG00000007005	-	85	39.313	ENSMNEG00000040746	MRPL4	88	39.313	Macaca_nemestrina
ENSCSAVG00000007005	-	85	32.061	ENSMLEG00000041712	MRPL4	87	32.061	Mandrillus_leucophaeus
ENSCSAVG00000007005	-	97	33.887	ENSMAMG00000001736	mrpl4	98	33.887	Mastacembelus_armatus
ENSCSAVG00000007005	-	95	34.130	ENSMZEG00005005809	mrpl4	96	34.130	Maylandia_zebra
ENSCSAVG00000007005	-	81	40.964	ENSMAUG00000013451	Mrpl4	86	40.964	Mesocricetus_auratus
ENSCSAVG00000007005	-	81	40.800	ENSMICG00000010267	MRPL4	84	40.800	Microcebus_murinus
ENSCSAVG00000007005	-	81	40.161	ENSMOCG00000014755	Mrpl4	86	40.161	Microtus_ochrogaster
ENSCSAVG00000007005	-	80	31.452	ENSMMOG00000013673	mrpl4	61	46.988	Mola_mola
ENSCSAVG00000007005	-	82	39.764	ENSMODG00000005476	MRPL4	84	39.764	Monodelphis_domestica
ENSCSAVG00000007005	-	94	33.564	ENSMALG00000002391	mrpl4	92	33.564	Monopterus_albus
ENSCSAVG00000007005	-	81	40.964	MGP_CAROLIEiJ_G0031854	Mrpl4	85	40.964	Mus_caroli
ENSCSAVG00000007005	-	81	41.365	ENSMUSG00000003299	Mrpl4	85	41.365	Mus_musculus
ENSCSAVG00000007005	-	81	40.562	MGP_PahariEiJ_G0014720	Mrpl4	85	40.562	Mus_pahari
ENSCSAVG00000007005	-	81	41.365	MGP_SPRETEiJ_G0032978	Mrpl4	85	41.365	Mus_spretus
ENSCSAVG00000007005	-	85	38.023	ENSMPUG00000006825	MRPL4	88	38.023	Mustela_putorius_furo
ENSCSAVG00000007005	-	81	40.000	ENSMLUG00000012280	MRPL4	97	40.000	Myotis_lucifugus
ENSCSAVG00000007005	-	81	39.044	ENSNGAG00000014705	Mrpl4	88	39.044	Nannospalax_galili
ENSCSAVG00000007005	-	95	34.471	ENSNBRG00000004804	mrpl4	96	34.471	Neolamprologus_brichardi
ENSCSAVG00000007005	-	66	31.034	ENSNLEG00000012155	-	64	31.034	Nomascus_leucogenys
ENSCSAVG00000007005	-	81	34.646	ENSMEUG00000002199	MRPL4	98	34.646	Notamacropus_eugenii
ENSCSAVG00000007005	-	88	36.786	ENSOPRG00000005735	MRPL4	93	36.786	Ochotona_princeps
ENSCSAVG00000007005	-	81	40.476	ENSODEG00000016194	MRPL4	86	40.476	Octodon_degus
ENSCSAVG00000007005	-	94	34.589	ENSONIG00000000136	mrpl4	95	34.589	Oreochromis_niloticus
ENSCSAVG00000007005	-	68	43.541	ENSOANG00000013891	MRPL4	100	43.541	Ornithorhynchus_anatinus
ENSCSAVG00000007005	-	99	34.416	ENSORLG00000000085	mrpl4	96	34.202	Oryzias_latipes
ENSCSAVG00000007005	-	80	38.211	ENSORLG00020020476	mrpl4	99	33.876	Oryzias_latipes_hni
ENSCSAVG00000007005	-	99	34.091	ENSORLG00015020892	mrpl4	99	33.876	Oryzias_latipes_hsok
ENSCSAVG00000007005	-	76	41.949	ENSOGAG00000011051	MRPL4	80	41.949	Otolemur_garnettii
ENSCSAVG00000007005	-	75	39.224	ENSOARG00000015602	MRPL4	82	39.167	Ovis_aries
ENSCSAVG00000007005	-	83	39.080	ENSPPAG00000041740	-	84	39.080	Pan_paniscus
ENSCSAVG00000007005	-	74	37.281	ENSPPRG00000004312	MRPL4	88	37.281	Panthera_pardus
ENSCSAVG00000007005	-	73	37.778	ENSPTIG00000010912	MRPL4	85	37.778	Panthera_tigris_altaica
ENSCSAVG00000007005	-	83	39.080	ENSPTRG00000010462	MRPL4	84	39.080	Pan_troglodytes
ENSCSAVG00000007005	-	85	38.931	ENSPANG00000001265	MRPL4	85	38.053	Papio_anubis
ENSCSAVG00000007005	-	92	36.014	ENSPKIG00000008086	mrpl4	90	36.014	Paramormyrops_kingsleyae
ENSCSAVG00000007005	-	90	34.783	ENSPMGG00000002329	mrpl4	93	34.783	Periophthalmus_magnuspinnatus
ENSCSAVG00000007005	-	81	41.767	ENSPEMG00000017474	Mrpl4	87	41.767	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007005	-	74	40.870	ENSPMAG00000007691	mrpl4	89	40.870	Petromyzon_marinus
ENSCSAVG00000007005	-	96	35.235	ENSPFOG00000013329	mrpl4	98	35.235	Poecilia_formosa
ENSCSAVG00000007005	-	96	35.235	ENSPLAG00000012864	mrpl4	98	35.235	Poecilia_latipinna
ENSCSAVG00000007005	-	96	35.235	ENSPMEG00000004937	mrpl4	98	35.235	Poecilia_mexicana
ENSCSAVG00000007005	-	95	35.836	ENSPREG00000021621	mrpl4	99	36.525	Poecilia_reticulata
ENSCSAVG00000007005	-	85	39.163	ENSPPYG00000009547	MRPL4	83	39.163	Pongo_abelii
ENSCSAVG00000007005	-	53	41.104	ENSPCAG00000002385	MRPL4	69	41.104	Procavia_capensis
ENSCSAVG00000007005	-	85	37.023	ENSPCOG00000016733	MRPL4	86	37.023	Propithecus_coquereli
ENSCSAVG00000007005	-	95	33.788	ENSPNYG00000023505	mrpl4	98	33.218	Pundamilia_nyererei
ENSCSAVG00000007005	-	82	39.526	ENSPNAG00000011785	mrpl4	74	39.526	Pygocentrus_nattereri
ENSCSAVG00000007005	-	81	41.365	ENSRNOG00000020659	Mrpl4	85	41.365	Rattus_norvegicus
ENSCSAVG00000007005	-	61	43.617	ENSRBIG00000032283	-	91	42.581	Rhinopithecus_bieti
ENSCSAVG00000007005	-	85	39.163	ENSRROG00000003982	MRPL4	88	39.163	Rhinopithecus_roxellana
ENSCSAVG00000007005	-	76	40.851	ENSSBOG00000020666	MRPL4	80	40.851	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007005	-	95	37.415	ENSSHAG00000008539	MRPL4	94	37.415	Sarcophilus_harrisii
ENSCSAVG00000007005	-	98	35.762	ENSSFOG00015003308	mrpl4	98	35.762	Scleropages_formosus
ENSCSAVG00000007005	-	80	35.628	ENSSMAG00000021118	mrpl4	95	32.759	Scophthalmus_maximus
ENSCSAVG00000007005	-	98	32.895	ENSSDUG00000002078	mrpl4	99	32.895	Seriola_dumerili
ENSCSAVG00000007005	-	98	33.224	ENSSLDG00000015083	mrpl4	99	33.224	Seriola_lalandi_dorsalis
ENSCSAVG00000007005	-	98	32.566	ENSSPAG00000010120	mrpl4	99	32.566	Stegastes_partitus
ENSCSAVG00000007005	-	88	36.727	ENSSSCG00000013656	MRPL4	99	36.727	Sus_scrofa
ENSCSAVG00000007005	-	96	35.811	ENSTRUG00000008532	mrpl4	97	35.811	Takifugu_rubripes
ENSCSAVG00000007005	-	78	38.494	ENSTNIG00000003265	mrpl4	95	35.052	Tetraodon_nigroviridis
ENSCSAVG00000007005	-	65	38.308	ENSTBEG00000006336	MRPL4	82	38.308	Tupaia_belangeri
ENSCSAVG00000007005	-	83	36.154	ENSTTRG00000009532	MRPL4	83	36.154	Tursiops_truncatus
ENSCSAVG00000007005	-	71	38.813	ENSUAMG00000020392	MRPL4	70	38.813	Ursus_americanus
ENSCSAVG00000007005	-	85	39.163	ENSUMAG00000025105	MRPL4	88	39.163	Ursus_maritimus
ENSCSAVG00000007005	-	81	40.562	ENSVVUG00000028961	MRPL4	85	40.562	Vulpes_vulpes
ENSCSAVG00000007005	-	92	37.413	ENSXETG00000022060	mrpl4	99	36.393	Xenopus_tropicalis
ENSCSAVG00000007005	-	99	33.657	ENSXCOG00000011438	mrpl4	99	33.657	Xiphophorus_couchianus
ENSCSAVG00000007005	-	96	34.228	ENSXMAG00000030102	mrpl4	98	34.228	Xiphophorus_maculatus