EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007036 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 9831 bases
Position: chrreftig_335:137757-147587
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000011970	DZF	PF07528.14	9e-42	1	1
ENSCSAVP00000011969	dsrm	PF00035.26	2.3e-24	1	2
ENSCSAVP00000011969	dsrm	PF00035.26	2.3e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012108	-	1328	-	ENSCSAVP00000011969	364 (aa)	-	H2Z307
ENSCSAVT00000012109	-	960	-	ENSCSAVP00000011970	206 (aa)	-	H2Z308

Gene Model

Click here to download ENSCSAVG00000007036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007036	-	82	38.889	ENSCSAVG00000001946	-	83	38.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007036	-	74	38.095	ENSANAG00000030279	DHX9	52	38.095	Aotus_nancymaae
ENSCSAVG00000007036	-	74	38.095	ENSCJAG00000004821	DHX9	52	38.095	Callithrix_jacchus
ENSCSAVG00000007036	-	74	38.095	ENSCCAG00000022597	DHX9	52	38.095	Cebus_capucinus
ENSCSAVG00000007036	-	74	38.095	ENSCATG00000027871	DHX9	52	38.095	Cercocebus_atys
ENSCSAVG00000007036	-	74	38.095	ENSCANG00000032888	DHX9	52	38.095	Colobus_angolensis_palliatus
ENSCSAVG00000007036	-	74	38.095	ENSGGOG00000013533	DHX9	52	38.095	Gorilla_gorilla
ENSCSAVG00000007036	-	72	44.828	ENSHCOG00000012968	dhx9	50	40.952	Hippocampus_comes
ENSCSAVG00000007036	-	74	38.095	ENSMFAG00000041152	DHX9	52	38.095	Macaca_fascicularis
ENSCSAVG00000007036	-	74	38.095	ENSMMUG00000005635	DHX9	52	38.095	Macaca_mulatta
ENSCSAVG00000007036	-	74	38.095	ENSMNEG00000041195	DHX9	52	38.095	Macaca_nemestrina
ENSCSAVG00000007036	-	74	38.095	ENSMLEG00000039925	DHX9	52	38.095	Mandrillus_leucophaeus
ENSCSAVG00000007036	-	74	37.143	MGP_CAROLIEiJ_G0014709	Dhx9	50	37.143	Mus_caroli
ENSCSAVG00000007036	-	74	37.143	ENSMUSG00000042699	Dhx9	50	37.143	Mus_musculus
ENSCSAVG00000007036	-	74	37.143	MGP_PahariEiJ_G0027945	-	51	37.143	Mus_pahari
ENSCSAVG00000007036	-	74	37.143	MGP_SPRETEiJ_G0015516	Dhx9	50	37.143	Mus_spretus
ENSCSAVG00000007036	-	74	40.000	ENSNBRG00000024348	-	56	40.000	Neolamprologus_brichardi
ENSCSAVG00000007036	-	74	38.095	ENSNLEG00000018013	DHX9	53	38.095	Nomascus_leucogenys
ENSCSAVG00000007036	-	74	38.095	ENSPPAG00000042251	-	59	38.095	Pan_paniscus
ENSCSAVG00000007036	-	74	38.095	ENSPPAG00000030190	DHX9	52	38.095	Pan_paniscus
ENSCSAVG00000007036	-	74	38.095	ENSPTRG00000001759	DHX9	52	38.095	Pan_troglodytes
ENSCSAVG00000007036	-	74	38.095	ENSPTRG00000049775	-	59	38.095	Pan_troglodytes
ENSCSAVG00000007036	-	74	38.095	ENSPANG00000012826	DHX9	52	38.095	Papio_anubis
ENSCSAVG00000007036	-	54	43.750	ENSPFOG00000019152	-	80	31.944	Poecilia_formosa
ENSCSAVG00000007036	-	74	38.095	ENSRBIG00000041202	DHX9	54	38.095	Rhinopithecus_bieti
ENSCSAVG00000007036	-	74	38.095	ENSRROG00000044740	DHX9	54	38.095	Rhinopithecus_roxellana