EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007062 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6905 bases
Position: chrreftig_25:377630-384534
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012016	RimK	PF08443.11	2.3e-05	1	1
ENSCSAVP00000012015	RimK	PF08443.11	2.3e-05	1	1
ENSCSAVP00000012014	RimK	PF08443.11	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012153	-	2079	-	ENSCSAVP00000012014	692 (aa)	-	H2Z352
ENSCSAVT00000012155	-	2142	-	ENSCSAVP00000012016	714 (aa)	-	H2Z354
ENSCSAVT00000012154	-	2127	-	ENSCSAVP00000012015	708 (aa)	-	H2Z353

Gene Model

Click here to download ENSCSAVG00000007062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007062's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007062	-	99	38.385	ENSCSAVG00000011361	-	99	39.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007062	-	99	53.631	ENSG00000078070	MCCC1	95	73.188	Homo_sapiens
ENSCSAVG00000007062	-	99	53.835	ENSAMEG00000015967	MCCC1	92	55.716	Ailuropoda_melanoleuca
ENSCSAVG00000007062	-	82	50.850	ENSACIG00000023146	mccc1	96	71.362	Amphilophus_citrinellus
ENSCSAVG00000007062	-	99	55.153	ENSAPLG00000008989	MCCC1	94	56.999	Anas_platyrhynchos
ENSCSAVG00000007062	-	99	52.374	ENSANAG00000028235	MCCC1	95	71.014	Aotus_nancymaae
ENSCSAVG00000007062	-	97	55.237	ENSACLG00000026110	mccc1	99	55.635	Astatotilapia_calliptera
ENSCSAVG00000007062	-	97	56.223	ENSAMXG00000001531	mccc1	94	56.710	Astyanax_mexicanus
ENSCSAVG00000007062	-	99	54.073	ENSBTAG00000006548	MCCC1	92	56.306	Bos_taurus
ENSCSAVG00000007062	-	99	51.397	ENSCJAG00000005103	MCCC1	95	71.981	Callithrix_jacchus
ENSCSAVG00000007062	-	99	53.352	ENSCAFG00000011749	MCCC1	92	55.217	Canis_familiaris
ENSCSAVG00000007062	-	99	53.352	ENSCAFG00020001000	MCCC1	92	55.217	Canis_lupus_dingo
ENSCSAVG00000007062	-	99	53.933	ENSCHIG00000025794	MCCC1	95	54.506	Capra_hircus
ENSCSAVG00000007062	-	99	53.492	ENSTSYG00000012606	MCCC1	97	72.209	Carlito_syrichta
ENSCSAVG00000007062	-	99	53.408	ENSCAPG00000012269	MCCC1	97	55.267	Cavia_aperea
ENSCSAVG00000007062	-	99	53.556	ENSCPOG00000010866	MCCC1	92	55.427	Cavia_porcellus
ENSCSAVG00000007062	-	99	54.190	ENSCATG00000037699	MCCC1	95	72.705	Cercocebus_atys
ENSCSAVG00000007062	-	88	52.673	ENSCLAG00000014174	MCCC1	99	54.248	Chinchilla_lanigera
ENSCSAVG00000007062	-	99	53.631	ENSCSAG00000013226	MCCC1	92	55.507	Chlorocebus_sabaeus
ENSCSAVG00000007062	-	99	55.091	ENSCPBG00000000534	MCCC1	95	56.633	Chrysemys_picta_bellii
ENSCSAVG00000007062	-	100	71.186	ENSCING00000020099	-	99	73.692	Ciona_intestinalis
ENSCSAVG00000007062	-	98	73.039	ENSCING00000019260	-	95	73.039	Ciona_intestinalis
ENSCSAVG00000007062	-	91	51.908	ENSCANG00000037917	MCCC1	97	73.315	Colobus_angolensis_palliatus
ENSCSAVG00000007062	-	99	54.648	ENSCGRG00001012469	Mccc1	93	56.232	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007062	-	99	54.648	ENSCGRG00000002616	Mccc1	94	56.232	Cricetulus_griseus_crigri
ENSCSAVG00000007062	-	99	55.028	ENSCSEG00000019501	mccc1	92	56.484	Cynoglossus_semilaevis
ENSCSAVG00000007062	-	99	53.857	ENSDARG00000102538	mccc1	94	55.572	Danio_rerio
ENSCSAVG00000007062	-	99	53.408	ENSDNOG00000012070	MCCC1	92	55.267	Dasypus_novemcinctus
ENSCSAVG00000007062	-	99	52.720	ENSDORG00000000473	Mccc1	97	54.559	Dipodomys_ordii
ENSCSAVG00000007062	-	99	51.545	ENSETEG00000008384	MCCC1	92	53.188	Echinops_telfairi
ENSCSAVG00000007062	-	53	73.016	ENSEBUG00000016250	-	89	73.016	Eptatretus_burgeri
ENSCSAVG00000007062	-	100	54.393	ENSEASG00005015339	MCCC1	91	72.917	Equus_asinus_asinus
ENSCSAVG00000007062	-	100	53.975	ENSECAG00000008214	MCCC1	93	55.459	Equus_caballus
ENSCSAVG00000007062	-	93	48.132	ENSEEUG00000011233	MCCC1	90	49.615	Erinaceus_europaeus
ENSCSAVG00000007062	-	97	55.000	ENSELUG00000010299	mccc1	98	55.908	Esox_lucius
ENSCSAVG00000007062	-	91	50.687	ENSFCAG00000000940	MCCC1	96	72.662	Felis_catus
ENSCSAVG00000007062	-	99	54.951	ENSFALG00000008252	MCCC1	94	56.623	Ficedula_albicollis
ENSCSAVG00000007062	-	99	52.068	ENSFDAG00000009183	MCCC1	92	53.598	Fukomys_damarensis
ENSCSAVG00000007062	-	97	55.079	ENSGMOG00000008521	mccc1	93	56.869	Gadus_morhua
ENSCSAVG00000007062	-	99	54.482	ENSGALG00000008785	MCCC1	88	56.214	Gallus_gallus
ENSCSAVG00000007062	-	99	54.190	ENSGAFG00000010643	mccc1	96	54.971	Gambusia_affinis
ENSCSAVG00000007062	-	98	53.714	ENSGAGG00000000770	MCCC1	99	55.852	Gopherus_agassizii
ENSCSAVG00000007062	-	99	54.190	ENSGGOG00000002784	MCCC1	95	73.913	Gorilla_gorilla
ENSCSAVG00000007062	-	97	55.237	ENSHBUG00000000956	mccc1	94	56.052	Haplochromis_burtoni
ENSCSAVG00000007062	-	99	53.212	ENSHGLG00000014650	MCCC1	93	54.665	Heterocephalus_glaber_female
ENSCSAVG00000007062	-	99	53.212	ENSHGLG00100015295	MCCC1	93	54.665	Heterocephalus_glaber_male
ENSCSAVG00000007062	-	99	54.916	ENSHCOG00000010503	mccc1	98	56.178	Hippocampus_comes
ENSCSAVG00000007062	-	99	54.712	ENSIPUG00000024615	mccc1	94	56.440	Ictalurus_punctatus
ENSCSAVG00000007062	-	99	53.073	ENSSTOG00000010361	MCCC1	92	55.072	Ictidomys_tridecemlineatus
ENSCSAVG00000007062	-	99	51.124	ENSJJAG00000003543	Mccc1	92	52.464	Jaculus_jaculus
ENSCSAVG00000007062	-	97	55.942	ENSLBEG00000001741	mccc1	91	56.579	Labrus_bergylta
ENSCSAVG00000007062	-	100	54.812	ENSLACG00000018119	MCCC1	94	56.792	Latimeria_chalumnae
ENSCSAVG00000007062	-	99	52.216	ENSLOCG00000000778	mccc1	93	53.857	Lepisosteus_oculatus
ENSCSAVG00000007062	-	99	53.073	ENSLAFG00000018018	MCCC1	93	54.928	Loxodonta_africana
ENSCSAVG00000007062	-	99	53.492	ENSMFAG00000000043	MCCC1	95	73.188	Macaca_fascicularis
ENSCSAVG00000007062	-	92	51.064	ENSMMUG00000010553	MCCC1	97	72.705	Macaca_mulatta
ENSCSAVG00000007062	-	99	51.061	ENSMNEG00000017163	MCCC1	95	69.639	Macaca_nemestrina
ENSCSAVG00000007062	-	99	52.514	ENSMLEG00000039351	MCCC1	95	72.705	Mandrillus_leucophaeus
ENSCSAVG00000007062	-	97	55.237	ENSMZEG00005015532	mccc1	94	56.052	Maylandia_zebra
ENSCSAVG00000007062	-	99	54.762	ENSMGAG00000009494	MCCC1	98	55.791	Meleagris_gallopavo
ENSCSAVG00000007062	-	99	53.911	ENSMICG00000048884	MCCC1	95	73.430	Microcebus_murinus
ENSCSAVG00000007062	-	99	53.417	ENSMOCG00000003671	Mccc1	93	55.507	Microtus_ochrogaster
ENSCSAVG00000007062	-	99	54.785	ENSMODG00000021288	MCCC1	94	55.201	Monodelphis_domestica
ENSCSAVG00000007062	-	99	54.202	MGP_CAROLIEiJ_G0024932	Mccc1	93	55.925	Mus_caroli
ENSCSAVG00000007062	-	99	54.318	ENSMUSG00000027709	Mccc1	93	56.214	Mus_musculus
ENSCSAVG00000007062	-	99	54.318	MGP_SPRETEiJ_G0025866	Mccc1	93	56.214	Mus_spretus
ENSCSAVG00000007062	-	99	54.481	ENSMPUG00000002371	MCCC1	86	54.481	Mustela_putorius_furo
ENSCSAVG00000007062	-	99	54.354	ENSMLUG00000012257	MCCC1	92	56.087	Myotis_lucifugus
ENSCSAVG00000007062	-	99	55.168	ENSNGAG00000001216	Mccc1	94	56.854	Nannospalax_galili
ENSCSAVG00000007062	-	99	53.112	ENSNLEG00000005989	MCCC1	95	73.430	Nomascus_leucogenys
ENSCSAVG00000007062	-	90	60.364	ENSOPRG00000007258	MCCC1	85	62.879	Ochotona_princeps
ENSCSAVG00000007062	-	99	54.050	ENSODEG00000012286	MCCC1	97	55.572	Octodon_degus
ENSCSAVG00000007062	-	97	55.524	ENSONIG00000008395	mccc1	94	56.340	Oreochromis_niloticus
ENSCSAVG00000007062	-	98	53.000	ENSOANG00000011253	MCCC1	99	54.653	Ornithorhynchus_anatinus
ENSCSAVG00000007062	-	99	50.838	ENSOCUG00000012393	MCCC1	92	52.464	Oryctolagus_cuniculus
ENSCSAVG00000007062	-	99	55.274	ENSORLG00000011678	mccc1	96	55.636	Oryzias_latipes
ENSCSAVG00000007062	-	99	55.415	ENSORLG00020005680	mccc1	96	55.780	Oryzias_latipes_hni
ENSCSAVG00000007062	-	99	55.415	ENSORLG00015003526	mccc1	96	55.780	Oryzias_latipes_hsok
ENSCSAVG00000007062	-	99	55.556	ENSOMEG00000011470	mccc1	94	56.069	Oryzias_melastigma
ENSCSAVG00000007062	-	97	51.862	ENSOGAG00000000659	MCCC1	99	53.881	Otolemur_garnettii
ENSCSAVG00000007062	-	99	53.792	ENSOARG00000020660	MCCC1	96	55.507	Ovis_aries
ENSCSAVG00000007062	-	99	54.237	ENSPPAG00000036167	MCCC1	95	73.430	Pan_paniscus
ENSCSAVG00000007062	-	91	50.687	ENSPPRG00000000127	MCCC1	96	72.662	Panthera_pardus
ENSCSAVG00000007062	-	99	52.374	ENSPTIG00000018514	MCCC1	96	72.182	Panthera_tigris_altaica
ENSCSAVG00000007062	-	99	54.314	ENSPTRG00000015662	MCCC1	95	73.430	Pan_troglodytes
ENSCSAVG00000007062	-	99	53.492	ENSPANG00000006870	MCCC1	95	72.947	Papio_anubis
ENSCSAVG00000007062	-	99	54.701	ENSPSIG00000017510	MCCC1	99	55.704	Pelodiscus_sinensis
ENSCSAVG00000007062	-	98	50.708	ENSPMGG00000000155	mccc1	95	52.077	Periophthalmus_magnuspinnatus
ENSCSAVG00000007062	-	99	54.635	ENSPEMG00000014164	Mccc1	93	56.377	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007062	-	99	52.654	ENSPCIG00000013027	MCCC1	79	54.245	Phascolarctos_cinereus
ENSCSAVG00000007062	-	99	54.609	ENSPFOG00000019171	mccc1	97	55.216	Poecilia_formosa
ENSCSAVG00000007062	-	99	54.749	ENSPLAG00000022735	mccc1	97	54.545	Poecilia_latipinna
ENSCSAVG00000007062	-	99	54.469	ENSPMEG00000000664	mccc1	97	54.266	Poecilia_mexicana
ENSCSAVG00000007062	-	99	53.911	ENSPPYG00000014331	MCCC1	92	55.797	Pongo_abelii
ENSCSAVG00000007062	-	99	51.791	ENSPCAG00000003195	MCCC1	92	53.571	Procavia_capensis
ENSCSAVG00000007062	-	99	53.631	ENSPCOG00000020095	MCCC1	95	73.188	Propithecus_coquereli
ENSCSAVG00000007062	-	97	53.314	ENSPVAG00000013436	MCCC1	91	55.060	Pteropus_vampyrus
ENSCSAVG00000007062	-	99	54.119	ENSPNAG00000025069	mccc1	96	54.225	Pygocentrus_nattereri
ENSCSAVG00000007062	-	99	53.203	ENSRNOG00000013293	Mccc1	94	54.876	Rattus_norvegicus
ENSCSAVG00000007062	-	99	53.631	ENSRBIG00000038726	MCCC1	95	73.188	Rhinopithecus_bieti
ENSCSAVG00000007062	-	99	53.631	ENSRROG00000041247	MCCC1	95	73.188	Rhinopithecus_roxellana
ENSCSAVG00000007062	-	98	52.714	ENSSBOG00000026219	MCCC1	97	72.705	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007062	-	99	54.294	ENSSHAG00000016104	MCCC1	97	55.777	Sarcophilus_harrisii
ENSCSAVG00000007062	-	99	55.119	ENSSFOG00015007784	mccc1	96	56.356	Scleropages_formosus
ENSCSAVG00000007062	-	99	54.979	ENSSMAG00000019667	mccc1	93	56.421	Scophthalmus_maximus
ENSCSAVG00000007062	-	98	53.638	ENSSPUG00000014366	MCCC1	99	55.391	Sphenodon_punctatus
ENSCSAVG00000007062	-	97	55.556	ENSSPAG00000011206	mccc1	98	54.259	Stegastes_partitus
ENSCSAVG00000007062	-	99	51.545	ENSSSCG00000025942	MCCC1	98	51.993	Sus_scrofa
ENSCSAVG00000007062	-	99	55.091	ENSTGUG00000010506	MCCC1	99	56.936	Taeniopygia_guttata
ENSCSAVG00000007062	-	99	54.318	ENSTBEG00000007988	MCCC1	98	56.034	Tupaia_belangeri
ENSCSAVG00000007062	-	99	53.472	ENSTTRG00000016518	MCCC1	92	55.331	Tursiops_truncatus
ENSCSAVG00000007062	-	60	72.222	ENSUAMG00000008378	MCCC1	99	72.488	Ursus_americanus
ENSCSAVG00000007062	-	99	53.352	ENSUMAG00000006927	MCCC1	92	55.217	Ursus_maritimus
ENSCSAVG00000007062	-	99	53.352	ENSVVUG00000006835	MCCC1	92	55.556	Vulpes_vulpes
ENSCSAVG00000007062	-	100	56.407	ENSXETG00000016826	mccc1	96	57.103	Xenopus_tropicalis