EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000007075 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
3822 bases
Position
chrreftig_13:1898896-1902717
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000012031Ribosomal_L13ePF01294.182.5e-8111
ENSCSAVP00000012032Ribosomal_L13ePF01294.188.9e-7411
ENSCSAVP00000012033Ribosomal_L13ePF01294.182e-7111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000012173-617-ENSCSAVP00000012033200 (aa)-H2Z371
ENSCSAVT00000012172-630-ENSCSAVP00000012032197 (aa)-H2Z370
ENSCSAVT00000012171-722-ENSCSAVP00000012031214 (aa)-H2Z369
Gene Model
Click here to download ENSCSAVG00000007075's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007075's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000007075-9865.238ENSG00000167526RPL1310068.254Homo_sapiens
ENSCSAVG00000007075-9867.143ENSAPOG00000010933rpl139763.725Acanthochromis_polyacanthus
ENSCSAVG00000007075-9855.981ENSAMEG00000001111RPL139654.634Ailuropoda_melanoleuca
ENSCSAVG00000007075-9865.714ENSACIG00000000422rpl139763.235Amphilophus_citrinellus
ENSCSAVG00000007075-9867.143ENSAOCG00000014635rpl139763.725Amphiprion_ocellaris
ENSCSAVG00000007075-9866.667ENSAPEG00000011271rpl139763.725Amphiprion_percula
ENSCSAVG00000007075-9866.667ENSATEG00000004902rpl139466.492Anabas_testudineus
ENSCSAVG00000007075-9866.667ENSACAG00000017072RPL139762.255Anolis_carolinensis
ENSCSAVG00000007075-9865.714ENSANAG00000030539RPL139762.745Aotus_nancymaae
ENSCSAVG00000007075-9866.190ENSACLG00000001642rpl139763.725Astatotilapia_calliptera
ENSCSAVG00000007075-9865.714ENSAMXG00000006495rpl139763.235Astyanax_mexicanus
ENSCSAVG00000007075-9860.952ENSBTAG00000033143-9758.333Bos_taurus
ENSCSAVG00000007075-9965.566ENSBTAG00000012044RPL137062.745Bos_taurus
ENSCSAVG00000007075-9953.922WBGene00004425rpl-139953.922Caenorhabditis_elegans
ENSCSAVG00000007075-9865.714ENSCJAG00000009672-9762.745Callithrix_jacchus
ENSCSAVG00000007075-9865.714ENSCJAG00000016268-9762.745Callithrix_jacchus
ENSCSAVG00000007075-9866.190ENSCAFG00000019840RPL139763.235Canis_familiaris
ENSCSAVG00000007075-8547.253ENSCAFG00000002388-10043.478Canis_familiaris
ENSCSAVG00000007075-7357.692ENSCAFG00020024795-7251.974Canis_lupus_dingo
ENSCSAVG00000007075-9866.190ENSCAFG00020005125RPL139763.235Canis_lupus_dingo
ENSCSAVG00000007075-9363.184ENSCHIG00000017227-8464.433Capra_hircus
ENSCSAVG00000007075-9953.846ENSCHIG00000026795-8953.846Capra_hircus
ENSCSAVG00000007075-9865.714ENSCHIG00000001441-9762.745Capra_hircus
ENSCSAVG00000007075-9864.762ENSTSYG00000027423RPL139761.765Carlito_syrichta
ENSCSAVG00000007075-9866.190ENSCPOG00000027348RPL139763.235Cavia_porcellus
ENSCSAVG00000007075-9865.714ENSCCAG00000024248RPL139762.745Cebus_capucinus
ENSCSAVG00000007075-9947.867ENSCATG00000038806-9347.179Cercocebus_atys
ENSCSAVG00000007075-9866.190ENSCATG00000042426RPL139763.235Cercocebus_atys
ENSCSAVG00000007075-9866.190ENSCLAG00000003801RPL139763.235Chinchilla_lanigera
ENSCSAVG00000007075-9866.190ENSCSAG00000000476-9763.235Chlorocebus_sabaeus
ENSCSAVG00000007075-9866.667ENSCPBG00000013618RPL139763.235Chrysemys_picta_bellii
ENSCSAVG00000007075-10089.720ENSCING00000002582-9789.720Ciona_intestinalis
ENSCSAVG00000007075-6570.000ENSCANG00000028258RPL136770.968Colobus_angolensis_palliatus
ENSCSAVG00000007075-8355.307ENSCGRG00001008381-9555.307Cricetulus_griseus_chok1gshd
ENSCSAVG00000007075-9852.381ENSCGRG00001023328-9354.211Cricetulus_griseus_chok1gshd
ENSCSAVG00000007075-9865.714ENSCGRG00001022563Rpl139763.235Cricetulus_griseus_chok1gshd
ENSCSAVG00000007075-8456.111ENSCGRG00000016503-10056.111Cricetulus_griseus_crigri
ENSCSAVG00000007075-9865.238ENSCGRG00000014556Rpl139762.745Cricetulus_griseus_crigri
ENSCSAVG00000007075-9866.667ENSCSEG00000008346rpl139763.235Cynoglossus_semilaevis
ENSCSAVG00000007075-9867.619ENSCVAG00000019742rpl139763.725Cyprinodon_variegatus
ENSCSAVG00000007075-9866.190ENSDARG00000099380rpl1310068.987Danio_rerio
ENSCSAVG00000007075-9865.714ENSDNOG00000034247RPL139762.745Dasypus_novemcinctus
ENSCSAVG00000007075-7968.639ENSDORG00000028330Rpl139665.031Dipodomys_ordii
ENSCSAVG00000007075-9861.215FBgn0011272RpL139258.209Drosophila_melanogaster
ENSCSAVG00000007075-9956.938ENSETEG00000015057-9756.938Echinops_telfairi
ENSCSAVG00000007075-8447.222ENSETEG00000004518-9547.222Echinops_telfairi
ENSCSAVG00000007075-9958.824ENSEBUG00000000730rpl139658.824Eptatretus_burgeri
ENSCSAVG00000007075-7166.429ENSEEUG00000011190-10066.429Erinaceus_europaeus
ENSCSAVG00000007075-9840.000ENSEEUG00000006113-9540.000Erinaceus_europaeus
ENSCSAVG00000007075-9864.286ENSELUG00000014509rpl139663.317Esox_lucius
ENSCSAVG00000007075-9864.286ENSFCAG00000003338RPL139761.275Felis_catus
ENSCSAVG00000007075-7948.521ENSFCAG00000029961-8648.521Felis_catus
ENSCSAVG00000007075-9866.190ENSFALG00000003173RPL139762.745Ficedula_albicollis
ENSCSAVG00000007075-9866.190ENSFDAG00000011310RPL139763.235Fukomys_damarensis
ENSCSAVG00000007075-9867.143ENSFHEG00000006122rpl139763.725Fundulus_heteroclitus
ENSCSAVG00000007075-9866.667ENSGMOG00000002752rpl139762.745Gadus_morhua
ENSCSAVG00000007075-9867.143ENSGALG00000006179RPL139763.725Gallus_gallus
ENSCSAVG00000007075-9965.816ENSGAFG00000017260rpl139665.816Gambusia_affinis
ENSCSAVG00000007075-9863.333ENSGACG00000015752rpl139760.294Gasterosteus_aculeatus
ENSCSAVG00000007075-9866.667ENSGAGG00000003371RPL139763.235Gopherus_agassizii
ENSCSAVG00000007075-9851.887ENSGGOG00000026762-9649.746Gorilla_gorilla
ENSCSAVG00000007075-8068.023ENSGGOG00000025427RPL139464.458Gorilla_gorilla
ENSCSAVG00000007075-9866.190ENSHBUG00000013579rpl139763.725Haplochromis_burtoni
ENSCSAVG00000007075-9866.190ENSHGLG00000010880RPL139763.235Heterocephalus_glaber_female
ENSCSAVG00000007075-9866.190ENSHGLG00100018449RPL139763.235Heterocephalus_glaber_male
ENSCSAVG00000007075-9964.646ENSHCOG00000002997rpl139764.646Hippocampus_comes
ENSCSAVG00000007075-9867.143ENSIPUG00000009775rpl139763.725Ictalurus_punctatus
ENSCSAVG00000007075-9964.286ENSSTOG00000011963RPL139664.286Ictidomys_tridecemlineatus
ENSCSAVG00000007075-9856.938ENSJJAG00000000236-9259.043Jaculus_jaculus
ENSCSAVG00000007075-9866.190ENSJJAG00000014012Rpl139764.216Jaculus_jaculus
ENSCSAVG00000007075-9866.190ENSKMAG00000006540rpl139763.725Kryptolebias_marmoratus
ENSCSAVG00000007075-9866.190ENSLBEG00000026455rpl139762.745Labrus_bergylta
ENSCSAVG00000007075-5764.463ENSLACG00000014843-8363.393Latimeria_chalumnae
ENSCSAVG00000007075-6450.000ENSLACG00000001306-10050.000Latimeria_chalumnae
ENSCSAVG00000007075-7653.333ENSLACG00000000752-8547.879Latimeria_chalumnae
ENSCSAVG00000007075-9865.714ENSLACG00000013768rpl139762.255Latimeria_chalumnae
ENSCSAVG00000007075-7951.765ENSLACG00000004644-9248.171Latimeria_chalumnae
ENSCSAVG00000007075-9252.821ENSLACG00000002299-9352.821Latimeria_chalumnae
ENSCSAVG00000007075-5562.712ENSLACG00000005311-9456.250Latimeria_chalumnae
ENSCSAVG00000007075-9567.647ENSLOCG00000004063rpl139762.745Lepisosteus_oculatus
ENSCSAVG00000007075-9866.667ENSLAFG00000004054RPL139763.725Loxodonta_africana
ENSCSAVG00000007075-9946.919ENSMFAG00000046109-9346.154Macaca_fascicularis
ENSCSAVG00000007075-9865.714ENSMFAG00000027717-9762.745Macaca_fascicularis
ENSCSAVG00000007075-9865.714ENSMMUG00000017928RPL139764.078Macaca_mulatta
ENSCSAVG00000007075-9946.445ENSMMUG00000038060-9345.641Macaca_mulatta
ENSCSAVG00000007075-9946.919ENSMNEG00000030483-9346.154Macaca_nemestrina
ENSCSAVG00000007075-7951.163ENSMNEG00000033097-8445.930Macaca_nemestrina
ENSCSAVG00000007075-9847.619ENSMLEG00000036728-9645.918Mandrillus_leucophaeus
ENSCSAVG00000007075-9947.783ENSMLEG00000033776-9347.783Mandrillus_leucophaeus
ENSCSAVG00000007075-9866.190ENSMAMG00000021552rpl139763.235Mastacembelus_armatus
ENSCSAVG00000007075-9866.190ENSMZEG00005014343rpl139763.725Maylandia_zebra
ENSCSAVG00000007075-8268.182ENSMGAG00000008027RPL139664.118Meleagris_gallopavo
ENSCSAVG00000007075-9863.810ENSMAUG00000016802-9760.294Mesocricetus_auratus
ENSCSAVG00000007075-7467.925ENSMAUG00000020543-10067.925Mesocricetus_auratus
ENSCSAVG00000007075-7270.423ENSMICG00000027620-9065.806Microcebus_murinus
ENSCSAVG00000007075-9865.238ENSMICG00000043954-9762.745Microcebus_murinus
ENSCSAVG00000007075-9859.809ENSMOCG00000016985-9656.650Microtus_ochrogaster
ENSCSAVG00000007075-9958.163ENSMOCG00000021875-9658.163Microtus_ochrogaster
ENSCSAVG00000007075-9852.857ENSMOCG00000011602-9649.510Microtus_ochrogaster
ENSCSAVG00000007075-9866.190ENSMOCG00000009058-9763.235Microtus_ochrogaster
ENSCSAVG00000007075-9864.762ENSMOCG00000002216-9761.765Microtus_ochrogaster
ENSCSAVG00000007075-9866.667ENSMMOG00000016577rpl139763.235Mola_mola
ENSCSAVG00000007075-9867.143ENSMODG00000003663RPL139763.725Monodelphis_domestica
ENSCSAVG00000007075-9867.619ENSMALG00000020934rpl139764.706Monopterus_albus
ENSCSAVG00000007075-9866.190MGP_CAROLIEiJ_G0031676Rpl139763.235Mus_caroli
ENSCSAVG00000007075-9866.190ENSMUSG00000000740Rpl139763.235Mus_musculus
ENSCSAVG00000007075-5753.731MGP_PahariEiJ_G0022842-10053.731Mus_pahari
ENSCSAVG00000007075-9866.190MGP_PahariEiJ_G0023274Rpl139763.235Mus_pahari
ENSCSAVG00000007075-9263.636MGP_SPRETEiJ_G0031839-7662.887Mus_spretus
ENSCSAVG00000007075-9866.190MGP_SPRETEiJ_G0032794Rpl139763.235Mus_spretus
ENSCSAVG00000007075-9541.753ENSMPUG00000001481-9041.753Mustela_putorius_furo
ENSCSAVG00000007075-9966.038ENSMLUG00000010950RPL139163.235Myotis_lucifugus
ENSCSAVG00000007075-8344.382ENSNGAG00000012072-9541.860Nannospalax_galili
ENSCSAVG00000007075-9866.190ENSNGAG00000018467Rpl139763.235Nannospalax_galili
ENSCSAVG00000007075-7858.683ENSNGAG00000014655-8758.683Nannospalax_galili
ENSCSAVG00000007075-9866.667ENSNBRG00000011031rpl139763.725Neolamprologus_brichardi
ENSCSAVG00000007075-9865.714ENSNLEG00000015774RPL139762.745Nomascus_leucogenys
ENSCSAVG00000007075-9850.711ENSNLEG00000028759-9749.268Nomascus_leucogenys
ENSCSAVG00000007075-9863.810ENSODEG00000019915-9761.765Octodon_degus
ENSCSAVG00000007075-9865.072ENSODEG00000019297-9762.562Octodon_degus
ENSCSAVG00000007075-9860.476ENSODEG00000019351-9757.843Octodon_degus
ENSCSAVG00000007075-9863.810ENSODEG00000020384-9761.275Octodon_degus
ENSCSAVG00000007075-9864.762ENSODEG00000019458-9762.255Octodon_degus
ENSCSAVG00000007075-9865.238ENSODEG00000004235-9762.745Octodon_degus
ENSCSAVG00000007075-9866.667ENSONIG00000005934rpl139763.725Oreochromis_niloticus
ENSCSAVG00000007075-9867.143ENSOANG00000006729RPL139763.725Ornithorhynchus_anatinus
ENSCSAVG00000007075-9862.201ENSOCUG00000022399-9760.099Oryctolagus_cuniculus
ENSCSAVG00000007075-9863.333ENSOCUG00000007536-9760.294Oryctolagus_cuniculus
ENSCSAVG00000007075-9862.679ENSOCUG00000024415-9760.591Oryctolagus_cuniculus
ENSCSAVG00000007075-9867.143ENSORLG00000007654rpl139763.725Oryzias_latipes
ENSCSAVG00000007075-9866.667ENSORLG00020009960rpl139763.725Oryzias_latipes_hni
ENSCSAVG00000007075-9866.667ENSORLG00015008108rpl139666.667Oryzias_latipes_hsok
ENSCSAVG00000007075-9866.667ENSOMEG00000001728rpl139466.839Oryzias_melastigma
ENSCSAVG00000007075-9865.714ENSOGAG00000026444RPL139763.235Otolemur_garnettii
ENSCSAVG00000007075-9961.321ENSOARG00000003957-6561.856Ovis_aries
ENSCSAVG00000007075-5253.398ENSOARG00000011291-6353.398Ovis_aries
ENSCSAVG00000007075-9850.943ENSPPAG00000041631-9748.768Pan_paniscus
ENSCSAVG00000007075-8068.023ENSPPAG00000029415-9564.458Pan_paniscus
ENSCSAVG00000007075-9963.776ENSPPAG00000042590-9363.776Pan_paniscus
ENSCSAVG00000007075-9864.286ENSPPRG00000003949RPL139761.275Panthera_pardus
ENSCSAVG00000007075-7950.000ENSPPRG00000006057-8350.000Panthera_pardus
ENSCSAVG00000007075-7950.000ENSPTIG00000014719-8346.784Panthera_tigris_altaica
ENSCSAVG00000007075-6065.116ENSPTIG00000010985RPL138160.163Panthera_tigris_altaica
ENSCSAVG00000007075-9850.230ENSPTRG00000047911-9748.276Pan_troglodytes
ENSCSAVG00000007075-9963.776ENSPTRG00000041770-9763.776Pan_troglodytes
ENSCSAVG00000007075-9865.714ENSPTRG00000008480RPL139762.745Pan_troglodytes
ENSCSAVG00000007075-9866.190ENSPANG00000031667RPL139763.235Papio_anubis
ENSCSAVG00000007075-9965.517ENSPKIG00000001789rpl139764.216Paramormyrops_kingsleyae
ENSCSAVG00000007075-9866.667ENSPSIG00000015634RPL139763.235Pelodiscus_sinensis
ENSCSAVG00000007075-9865.714ENSPMGG00000006067rpl139761.765Periophthalmus_magnuspinnatus
ENSCSAVG00000007075-9866.190ENSPEMG00000010342Rpl139763.235Peromyscus_maniculatus_bairdii
ENSCSAVG00000007075-9866.667ENSPFOG00000013435rpl139763.235Poecilia_formosa
ENSCSAVG00000007075-9866.667ENSPLAG00000004085rpl139763.235Poecilia_latipinna
ENSCSAVG00000007075-9866.667ENSPMEG00000015599rpl139763.235Poecilia_mexicana
ENSCSAVG00000007075-9866.667ENSPREG00000023190rpl139763.235Poecilia_reticulata
ENSCSAVG00000007075-9865.714ENSPCAG00000015461RPL139762.745Procavia_capensis
ENSCSAVG00000007075-9865.714ENSPCOG00000024647RPL139763.235Propithecus_coquereli
ENSCSAVG00000007075-9963.235ENSPVAG00000015130RPL139763.235Pteropus_vampyrus
ENSCSAVG00000007075-9866.190ENSPNYG00000013189rpl139763.725Pundamilia_nyererei
ENSCSAVG00000007075-9866.190ENSPNAG00000002916rpl139763.235Pygocentrus_nattereri
ENSCSAVG00000007075-9866.667ENSRNOG00000015335Rpl139763.725Rattus_norvegicus
ENSCSAVG00000007075-9861.905ENSRNOG00000029227AABR07054469.19758.824Rattus_norvegicus
ENSCSAVG00000007075-9865.714ENSRNOG00000055911LOC1003612599762.745Rattus_norvegicus
ENSCSAVG00000007075-9865.714ENSRNOG00000061438LOC1003604919762.745Rattus_norvegicus
ENSCSAVG00000007075-9863.333ENSRNOG00000059545AC114446.19760.294Rattus_norvegicus
ENSCSAVG00000007075-9948.341ENSRBIG00000010434-8646.429Rhinopithecus_bieti
ENSCSAVG00000007075-9866.190ENSRBIG00000031937RPL139763.235Rhinopithecus_bieti
ENSCSAVG00000007075-9948.341ENSRROG00000025626-8646.429Rhinopithecus_roxellana
ENSCSAVG00000007075-9866.190ENSRROG00000036999-9763.235Rhinopithecus_roxellana
ENSCSAVG00000007075-9447.027YMR142CRPL13B9747.959Saccharomyces_cerevisiae
ENSCSAVG00000007075-9447.027YDL082WRPL13A9747.959Saccharomyces_cerevisiae
ENSCSAVG00000007075-9865.714ENSSBOG00000028589-9762.745Saimiri_boliviensis_boliviensis
ENSCSAVG00000007075-9950.246ENSSBOG00000019618-9650.246Saimiri_boliviensis_boliviensis
ENSCSAVG00000007075-7944.706ENSSHAG00000010433-9944.706Sarcophilus_harrisii
ENSCSAVG00000007075-9865.714ENSSFOG00015019594rpl139762.255Scleropages_formosus
ENSCSAVG00000007075-9865.238ENSSMAG00000021443rpl139762.745Scophthalmus_maximus
ENSCSAVG00000007075-9867.143ENSSDUG00000001262rpl139763.725Seriola_dumerili
ENSCSAVG00000007075-9867.143ENSSLDG00000021182rpl139763.725Seriola_lalandi_dorsalis
ENSCSAVG00000007075-9453.061ENSSLDG00000007067-9153.061Seriola_lalandi_dorsalis
ENSCSAVG00000007075-8063.793ENSSPUG00000006904RPL139763.793Sphenodon_punctatus
ENSCSAVG00000007075-9867.143ENSSPAG00000020434rpl139763.725Stegastes_partitus
ENSCSAVG00000007075-9945.128ENSSSCG00000036198-9447.159Sus_scrofa
ENSCSAVG00000007075-9343.719ENSSSCG00000029020-9039.196Sus_scrofa
ENSCSAVG00000007075-9046.927ENSSSCG00000033294-8946.927Sus_scrofa
ENSCSAVG00000007075-9850.952ENSSSCG00000003723-9648.529Sus_scrofa
ENSCSAVG00000007075-9866.190ENSSSCG00000024974RPL139763.235Sus_scrofa
ENSCSAVG00000007075-9350.000ENSSSCG00000007813-9352.381Sus_scrofa
ENSCSAVG00000007075-9865.714ENSTGUG00000007874RPL139762.255Taeniopygia_guttata
ENSCSAVG00000007075-9866.667ENSTRUG00000021170rpl139763.725Takifugu_rubripes
ENSCSAVG00000007075-9867.143ENSTNIG00000009349rpl139764.216Tetraodon_nigroviridis
ENSCSAVG00000007075-9865.714ENSTTRG00000004374RPL139762.745Tursiops_truncatus
ENSCSAVG00000007075-9865.714ENSUAMG00000020363RPL139762.745Ursus_americanus
ENSCSAVG00000007075-5370.175ENSVPAG00000000569-8969.091Vicugna_pacos
ENSCSAVG00000007075-9842.788ENSVVUG00000005779-9742.788Vulpes_vulpes
ENSCSAVG00000007075-9861.429ENSVVUG00000003839-9658.333Vulpes_vulpes
ENSCSAVG00000007075-9864.286ENSXETG00000019835rpl139761.765Xenopus_tropicalis
ENSCSAVG00000007075-9866.190ENSXCOG00000011315rpl139762.745Xiphophorus_couchianus
ENSCSAVG00000007075-9866.667ENSXMAG00000003221rpl139763.235Xiphophorus_maculatus

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