EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007111 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8230 bases
Position: chrreftig_77:2603471-2611700
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012095	NTP_transf_7	PF07984.12	3.9e-142	1	1
ENSCSAVP00000012096	NTP_transf_7	PF07984.12	4.9e-141	1	1
ENSCSAVP00000012094	NTP_transf_7	PF07984.12	3.2e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012234	-	1248	-	ENSCSAVP00000012094	386 (aa)	-	H2Z3D2
ENSCSAVT00000012235	-	1140	-	ENSCSAVP00000012095	380 (aa)	-	H2Z3D3
ENSCSAVT00000012236	-	1104	-	ENSCSAVP00000012096	368 (aa)	-	H2Z3D4

Gene Model

Click here to download ENSCSAVG00000007111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007111	-	100	51.902	ENSG00000183508	TENT5C	92	51.064	Homo_sapiens
ENSCSAVG00000007111	-	100	50.815	ENSAPOG00000012606	tent5c	90	51.233	Acanthochromis_polyacanthus
ENSCSAVG00000007111	-	100	52.174	ENSAMEG00000019061	TENT5C	89	52.174	Ailuropoda_melanoleuca
ENSCSAVG00000007111	-	100	51.087	ENSAOCG00000002511	tent5c	91	51.507	Amphiprion_ocellaris
ENSCSAVG00000007111	-	100	51.087	ENSAPEG00000018383	tent5c	91	51.507	Amphiprion_percula
ENSCSAVG00000007111	-	100	51.902	ENSATEG00000000626	tent5c	92	52.329	Anabas_testudineus
ENSCSAVG00000007111	-	100	51.087	ENSAPLG00000001108	TENT5C	89	51.233	Anas_platyrhynchos
ENSCSAVG00000007111	-	100	51.087	ENSANAG00000020216	TENT5C	92	50.266	Aotus_nancymaae
ENSCSAVG00000007111	-	100	51.902	ENSACLG00000016862	tent5c	92	52.044	Astatotilapia_calliptera
ENSCSAVG00000007111	-	100	52.717	ENSAMXG00000025994	tent5c	93	52.128	Astyanax_mexicanus
ENSCSAVG00000007111	-	100	52.717	ENSBTAG00000046509	TENT5C	92	51.047	Bos_taurus
ENSCSAVG00000007111	-	100	51.359	ENSCJAG00000039217	TENT5C	92	50.532	Callithrix_jacchus
ENSCSAVG00000007111	-	100	51.902	ENSCAFG00000009883	TENT5C	92	51.330	Canis_familiaris
ENSCSAVG00000007111	-	100	51.902	ENSCAFG00020020652	TENT5C	92	51.330	Canis_lupus_dingo
ENSCSAVG00000007111	-	100	52.717	ENSCHIG00000005579	TENT5C	92	51.862	Capra_hircus
ENSCSAVG00000007111	-	99	40.701	ENSTSYG00000029621	-	96	40.897	Carlito_syrichta
ENSCSAVG00000007111	-	100	52.717	ENSTSYG00000009025	-	92	51.862	Carlito_syrichta
ENSCSAVG00000007111	-	100	51.630	ENSCAPG00000001987	TENT5C	92	50.798	Cavia_aperea
ENSCSAVG00000007111	-	100	51.630	ENSCPOG00000035573	TENT5C	92	50.798	Cavia_porcellus
ENSCSAVG00000007111	-	100	51.359	ENSCCAG00000020387	TENT5C	92	50.532	Cebus_capucinus
ENSCSAVG00000007111	-	100	51.630	ENSCATG00000019360	TENT5C	92	51.064	Cercocebus_atys
ENSCSAVG00000007111	-	100	51.359	ENSCLAG00000006985	TENT5C	92	50.532	Chinchilla_lanigera
ENSCSAVG00000007111	-	100	51.630	ENSCSAG00000000173	TENT5C	92	51.064	Chlorocebus_sabaeus
ENSCSAVG00000007111	-	100	52.174	ENSCHOG00000002891	TENT5C	92	51.330	Choloepus_hoffmanni
ENSCSAVG00000007111	-	100	50.543	ENSCPBG00000001497	TENT5C	89	50.685	Chrysemys_picta_bellii
ENSCSAVG00000007111	-	100	51.359	ENSCANG00000007763	TENT5C	92	50.798	Colobus_angolensis_palliatus
ENSCSAVG00000007111	-	100	52.717	ENSCGRG00001005586	Tent5c	92	52.128	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007111	-	100	52.717	ENSCGRG00000018627	Tent5c	92	52.128	Cricetulus_griseus_crigri
ENSCSAVG00000007111	-	99	50.409	ENSCVAG00000014761	tent5c	89	50.824	Cyprinodon_variegatus
ENSCSAVG00000007111	-	100	51.630	ENSDARG00000010437	tent5c	97	50.704	Danio_rerio
ENSCSAVG00000007111	-	100	52.446	ENSDNOG00000012661	TENT5C	89	52.446	Dasypus_novemcinctus
ENSCSAVG00000007111	-	100	52.174	ENSDORG00000010159	Tent5c	89	52.174	Dipodomys_ordii
ENSCSAVG00000007111	-	100	51.630	ENSETEG00000008142	TENT5C	89	51.630	Echinops_telfairi
ENSCSAVG00000007111	-	100	51.630	ENSEASG00005006390	TENT5C	89	51.630	Equus_asinus_asinus
ENSCSAVG00000007111	-	100	51.630	ENSECAG00000019626	TENT5C	89	51.630	Equus_caballus
ENSCSAVG00000007111	-	100	51.902	ENSELUG00000005791	tent5c	92	51.475	Esox_lucius
ENSCSAVG00000007111	-	100	51.902	ENSFCAG00000022444	TENT5C	89	52.055	Felis_catus
ENSCSAVG00000007111	-	100	49.185	ENSFALG00000014558	TENT5C	92	48.670	Ficedula_albicollis
ENSCSAVG00000007111	-	100	52.446	ENSFDAG00000001153	TENT5C	91	51.733	Fukomys_damarensis
ENSCSAVG00000007111	-	100	50.815	ENSGALG00000014453	TENT5C	89	50.959	Gallus_gallus
ENSCSAVG00000007111	-	99	50.136	ENSGAFG00000013186	tent5c	90	50.549	Gambusia_affinis
ENSCSAVG00000007111	-	61	54.018	ENSGACG00000008276	tent5c	97	53.712	Gasterosteus_aculeatus
ENSCSAVG00000007111	-	100	50.815	ENSGAGG00000016484	TENT5C	89	50.959	Gopherus_agassizii
ENSCSAVG00000007111	-	100	51.630	ENSGGOG00000038013	FAM46C	92	51.064	Gorilla_gorilla
ENSCSAVG00000007111	-	100	51.902	ENSHBUG00000004430	tent5c	92	52.044	Haplochromis_burtoni
ENSCSAVG00000007111	-	100	52.174	ENSHGLG00000017489	FAM46C	91	51.330	Heterocephalus_glaber_female
ENSCSAVG00000007111	-	100	52.174	ENSHGLG00100007838	FAM46C	91	51.330	Heterocephalus_glaber_male
ENSCSAVG00000007111	-	100	50.543	ENSHCOG00000017681	tent5c	84	50.959	Hippocampus_comes
ENSCSAVG00000007111	-	100	52.717	ENSIPUG00000003310	fam46c	92	51.862	Ictalurus_punctatus
ENSCSAVG00000007111	-	100	52.446	ENSSTOG00000010392	TENT5C	89	52.446	Ictidomys_tridecemlineatus
ENSCSAVG00000007111	-	100	51.359	ENSJJAG00000013174	Tent5c	92	50.532	Jaculus_jaculus
ENSCSAVG00000007111	-	75	52.727	ENSKMAG00000016133	tent5c	86	53.309	Kryptolebias_marmoratus
ENSCSAVG00000007111	-	100	50.815	ENSLACG00000010490	TENT5C	87	50.959	Latimeria_chalumnae
ENSCSAVG00000007111	-	100	52.717	ENSLOCG00000017806	tent5c	91	52.703	Lepisosteus_oculatus
ENSCSAVG00000007111	-	100	52.446	ENSLAFG00000014696	TENT5C	89	52.446	Loxodonta_africana
ENSCSAVG00000007111	-	100	51.630	ENSMFAG00000019955	TENT5C	92	51.064	Macaca_fascicularis
ENSCSAVG00000007111	-	100	51.630	ENSMMUG00000004907	TENT5C	92	51.064	Macaca_mulatta
ENSCSAVG00000007111	-	100	51.630	ENSMNEG00000016833	TENT5C	92	51.064	Macaca_nemestrina
ENSCSAVG00000007111	-	100	51.902	ENSMLEG00000012342	TENT5C	89	51.902	Mandrillus_leucophaeus
ENSCSAVG00000007111	-	100	51.087	ENSMAMG00000020762	tent5c	91	51.507	Mastacembelus_armatus
ENSCSAVG00000007111	-	100	51.902	ENSMZEG00005019417	tent5c	92	52.044	Maylandia_zebra
ENSCSAVG00000007111	-	100	51.087	ENSMGAG00000016064	TENT5C	87	51.233	Meleagris_gallopavo
ENSCSAVG00000007111	-	100	52.446	ENSMAUG00000017728	Tent5c	92	51.862	Mesocricetus_auratus
ENSCSAVG00000007111	-	100	52.174	ENSMICG00000001773	TENT5C	89	52.174	Microcebus_murinus
ENSCSAVG00000007111	-	100	52.174	ENSMOCG00000018840	Tent5c	92	51.862	Microtus_ochrogaster
ENSCSAVG00000007111	-	100	52.446	ENSMMOG00000019413	tent5c	91	52.603	Mola_mola
ENSCSAVG00000007111	-	100	52.446	ENSMODG00000023227	TENT5C	88	52.316	Monodelphis_domestica
ENSCSAVG00000007111	-	100	51.087	ENSMALG00000020320	tent5c	88	51.507	Monopterus_albus
ENSCSAVG00000007111	-	100	51.630	MGP_CAROLIEiJ_G0025423	Tent5c	92	51.330	Mus_caroli
ENSCSAVG00000007111	-	100	51.902	ENSMUSG00000044468	Tent5c	92	51.596	Mus_musculus
ENSCSAVG00000007111	-	100	52.174	MGP_PahariEiJ_G0026867	Tent5c	92	51.862	Mus_pahari
ENSCSAVG00000007111	-	100	51.630	MGP_SPRETEiJ_G0026373	Tent5c	92	51.330	Mus_spretus
ENSCSAVG00000007111	-	100	51.359	ENSMPUG00000001581	TENT5C	88	50.532	Mustela_putorius_furo
ENSCSAVG00000007111	-	100	51.630	ENSMLUG00000014236	TENT5C	89	51.781	Myotis_lucifugus
ENSCSAVG00000007111	-	100	51.902	ENSNGAG00000021919	Tent5c	89	51.902	Nannospalax_galili
ENSCSAVG00000007111	-	100	51.630	ENSNBRG00000015085	tent5c	87	51.771	Neolamprologus_brichardi
ENSCSAVG00000007111	-	100	51.630	ENSNLEG00000035910	TENT5C	92	51.064	Nomascus_leucogenys
ENSCSAVG00000007111	-	100	52.446	ENSMEUG00000010956	TENT5C	89	52.446	Notamacropus_eugenii
ENSCSAVG00000007111	-	100	51.359	ENSODEG00000006187	TENT5C	92	50.532	Octodon_degus
ENSCSAVG00000007111	-	99	52.316	ENSONIG00000020649	tent5c	90	52.747	Oreochromis_niloticus
ENSCSAVG00000007111	-	100	49.326	ENSOANG00000003065	TENT5C	81	49.326	Ornithorhynchus_anatinus
ENSCSAVG00000007111	-	100	52.174	ENSOCUG00000002935	TENT5C	89	52.174	Oryctolagus_cuniculus
ENSCSAVG00000007111	-	99	49.864	ENSORLG00000008334	tent5c	90	50.275	Oryzias_latipes
ENSCSAVG00000007111	-	100	49.728	ENSORLG00020022397	tent5c	87	50.137	Oryzias_latipes_hni
ENSCSAVG00000007111	-	99	50.136	ENSORLG00015023220	tent5c	90	50.549	Oryzias_latipes_hsok
ENSCSAVG00000007111	-	99	48.501	ENSOMEG00000017474	tent5c	88	48.901	Oryzias_melastigma
ENSCSAVG00000007111	-	100	52.174	ENSOGAG00000033246	TENT5C	92	51.330	Otolemur_garnettii
ENSCSAVG00000007111	-	100	51.630	ENSPPAG00000023449	TENT5C	92	51.064	Pan_paniscus
ENSCSAVG00000007111	-	100	51.902	ENSPPRG00000016270	TENT5C	89	52.055	Panthera_pardus
ENSCSAVG00000007111	-	100	51.902	ENSPTIG00000007350	TENT5C	89	52.055	Panthera_tigris_altaica
ENSCSAVG00000007111	-	100	51.630	ENSPTRG00000049021	TENT5C	92	51.064	Pan_troglodytes
ENSCSAVG00000007111	-	100	51.359	ENSPANG00000005228	TENT5C	92	50.798	Papio_anubis
ENSCSAVG00000007111	-	100	50.815	ENSPKIG00000024937	TENT5C	90	50.959	Paramormyrops_kingsleyae
ENSCSAVG00000007111	-	66	53.279	ENSPKIG00000011797	tent5c	87	53.527	Paramormyrops_kingsleyae
ENSCSAVG00000007111	-	100	50.000	ENSPSIG00000001993	TENT5C	89	50.137	Pelodiscus_sinensis
ENSCSAVG00000007111	-	100	50.815	ENSPMGG00000022698	tent5c	92	50.541	Periophthalmus_magnuspinnatus
ENSCSAVG00000007111	-	100	52.446	ENSPCIG00000009669	TENT5C	81	52.316	Phascolarctos_cinereus
ENSCSAVG00000007111	-	99	50.136	ENSPFOG00000020818	tent5c	90	50.549	Poecilia_formosa
ENSCSAVG00000007111	-	99	50.543	ENSPLAG00000014221	tent5c	79	50.959	Poecilia_latipinna
ENSCSAVG00000007111	-	99	50.136	ENSPMEG00000009257	tent5c	91	50.549	Poecilia_mexicana
ENSCSAVG00000007111	-	99	50.407	ENSPREG00000019477	tent5c	90	50.820	Poecilia_reticulata
ENSCSAVG00000007111	-	100	51.630	ENSPPYG00000000972	TENT5C	92	51.064	Pongo_abelii
ENSCSAVG00000007111	-	100	52.174	ENSPCAG00000009768	TENT5C	89	52.174	Procavia_capensis
ENSCSAVG00000007111	-	100	52.174	ENSPCOG00000026594	TENT5C	89	52.174	Propithecus_coquereli
ENSCSAVG00000007111	-	100	52.174	ENSPVAG00000011846	TENT5C	92	51.330	Pteropus_vampyrus
ENSCSAVG00000007111	-	100	51.902	ENSPNYG00000006149	tent5c	87	52.044	Pundamilia_nyererei
ENSCSAVG00000007111	-	100	52.174	ENSPNAG00000006292	tent5c	91	52.162	Pygocentrus_nattereri
ENSCSAVG00000007111	-	100	52.717	ENSRNOG00000015222	Tent5c	92	52.394	Rattus_norvegicus
ENSCSAVG00000007111	-	100	51.630	ENSRBIG00000030666	TENT5C	92	51.064	Rhinopithecus_bieti
ENSCSAVG00000007111	-	100	51.630	ENSRROG00000002815	TENT5C	92	51.064	Rhinopithecus_roxellana
ENSCSAVG00000007111	-	100	51.359	ENSSBOG00000019248	TENT5C	92	50.532	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007111	-	100	52.446	ENSSHAG00000006188	TENT5C	89	52.446	Sarcophilus_harrisii
ENSCSAVG00000007111	-	80	43.689	ENSSFOG00015000525	tent5c	69	43.689	Scleropages_formosus
ENSCSAVG00000007111	-	100	51.087	ENSSMAG00000008485	tent5c	91	51.507	Scophthalmus_maximus
ENSCSAVG00000007111	-	69	54.545	ENSSDUG00000014400	tent5c	82	55.200	Seriola_dumerili
ENSCSAVG00000007111	-	98	51.934	ENSSLDG00000023464	tent5c	90	52.368	Seriola_lalandi_dorsalis
ENSCSAVG00000007111	-	100	51.087	ENSSARG00000005177	TENT5C	89	51.087	Sorex_araneus
ENSCSAVG00000007111	-	100	49.728	ENSSPUG00000005653	TENT5C	89	49.863	Sphenodon_punctatus
ENSCSAVG00000007111	-	100	50.815	ENSSPAG00000000748	tent5c	91	51.233	Stegastes_partitus
ENSCSAVG00000007111	-	100	51.902	ENSSSCG00000006729	TENT5C	89	51.902	Sus_scrofa
ENSCSAVG00000007111	-	100	50.543	ENSTGUG00000013359	-	92	50.000	Taeniopygia_guttata
ENSCSAVG00000007111	-	100	50.815	ENSTGUG00000014917	-	92	50.000	Taeniopygia_guttata
ENSCSAVG00000007111	-	99	51.226	ENSTRUG00000001935	tent5c	87	51.648	Takifugu_rubripes
ENSCSAVG00000007111	-	100	52.717	ENSTTRG00000010543	TENT5C	89	52.717	Tursiops_truncatus
ENSCSAVG00000007111	-	100	52.174	ENSUAMG00000008305	TENT5C	92	51.330	Ursus_americanus
ENSCSAVG00000007111	-	100	52.174	ENSUMAG00000004680	TENT5C	79	52.174	Ursus_maritimus
ENSCSAVG00000007111	-	100	51.630	ENSVVUG00000010460	TENT5C	82	51.330	Vulpes_vulpes
ENSCSAVG00000007111	-	100	52.717	ENSXETG00000025781	tent5c	90	52.291	Xenopus_tropicalis
ENSCSAVG00000007111	-	99	50.543	ENSXCOG00000018193	tent5c	91	50.959	Xiphophorus_couchianus