EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007132 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 547 bases
Position: chrreftig_58:645715-646261
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012126	PARP	PF00644.20	9.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012266	-	471	-	ENSCSAVP00000012126	157 (aa)	-	H2Z3G4

Gene Model

Click here to download ENSCSAVG00000007132's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007132's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007132	-	100	43.038	ENSCSAVG00000004787	-	91	43.038
ENSCSAVG00000007132	-	100	45.223	ENSCSAVG00000006566	-	100	45.223
ENSCSAVG00000007132	-	100	49.045	ENSCSAVG00000006569	-	99	49.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007132	-	85	48.507	ENSCING00000023401	-	98	48.507	Ciona_intestinalis
ENSCSAVG00000007132	-	100	61.783	ENSCING00000015928	-	63	61.783	Ciona_intestinalis
ENSCSAVG00000007132	-	78	41.129	ENSLACG00000000311	-	98	41.129	Latimeria_chalumnae