EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007134 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3927 bases
Position: chrreftig_58:667724-671650
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012128	PARP	PF00644.20	2.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012268	-	1134	-	ENSCSAVP00000012128	378 (aa)	-	H2Z3G6

Gene Model

Click here to download ENSCSAVG00000007134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007134	-	99	34.211	ENSCSAVG00000000429	-	82	34.211
ENSCSAVG00000007134	-	100	89.791	ENSCSAVG00000007096	-	99	89.791
ENSCSAVG00000007134	-	99	36.000	ENSCSAVG00000008867	-	99	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007134	-	57	42.273	ENSCING00000015928	-	85	42.273	Ciona_intestinalis
ENSCSAVG00000007134	-	99	30.526	ENSCING00000001882	-	82	30.526	Ciona_intestinalis
ENSCSAVG00000007134	-	100	62.051	ENSCING00000014082	-	73	62.051	Ciona_intestinalis
ENSCSAVG00000007134	-	99	36.616	ENSCING00000001893	-	71	36.616	Ciona_intestinalis
ENSCSAVG00000007134	-	56	43.056	ENSCING00000002959	-	59	43.056	Ciona_intestinalis
ENSCSAVG00000007134	-	53	35.644	ENSLACG00000008565	-	63	35.644	Latimeria_chalumnae
ENSCSAVG00000007134	-	97	31.300	ENSPMAG00000003817	-	88	31.300	Petromyzon_marinus