EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007262 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2601 bases
Position: chrreftig_67:1008168-1010768
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012351	MTS	PF05175.14	3.5e-06	1	1
ENSCSAVP00000012351	Methyltransf_31	PF13847.6	7.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012494	-	720	-	ENSCSAVP00000012351	185 (aa)	-	H2Z439

Gene Model

Click here to download ENSCSAVG00000007262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007262	-	89	57.927	ENSCSAVG00000005814	-	78	57.927
ENSCSAVG00000007262	-	94	80.925	ENSCSAVG00000004321	-	78	80.925
ENSCSAVG00000007262	-	91	64.497	ENSCSAVG00000011294	-	76	64.497
ENSCSAVG00000007262	-	94	57.803	ENSCSAVG00000011296	-	78	57.803
ENSCSAVG00000007262	-	92	64.706	ENSCSAVG00000011293	-	77	64.706
ENSCSAVG00000007262	-	50	66.667	ENSCSAVG00000005807	-	70	63.918
ENSCSAVG00000007262	-	80	30.872	ENSCSAVG00000006531	-	67	30.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007262	-	92	55.882	ENSCING00000021159	-	77	55.882	Ciona_intestinalis