EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007269 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1095 bases
Position: chrreftig_30:2083850-2084944
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012360	RTC	PF01137.21	6.2e-83	1	1
ENSCSAVP00000012360	RTC_insert	PF05189.13	1.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012503	-	1095	-	ENSCSAVP00000012360	364 (aa)	-	H2Z448

Gene Model

Click here to download ENSCSAVG00000007269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007269	-	98	53.889	ENSG00000137996	RTCA	98	53.889	Homo_sapiens
ENSCSAVG00000007269	-	55	30.806	ENSG00000120158	RCL1	96	30.806	Homo_sapiens
ENSCSAVG00000007269	-	99	54.848	ENSAPOG00000001345	rtca	98	54.848	Acanthochromis_polyacanthus
ENSCSAVG00000007269	-	73	54.647	ENSAMEG00000008855	RTCA	100	54.647	Ailuropoda_melanoleuca
ENSCSAVG00000007269	-	98	54.596	ENSACIG00000019643	rtca	98	54.596	Amphilophus_citrinellus
ENSCSAVG00000007269	-	98	54.875	ENSAOCG00000014979	rtca	98	54.875	Amphiprion_ocellaris
ENSCSAVG00000007269	-	98	54.875	ENSAPEG00000006945	rtca	98	54.875	Amphiprion_percula
ENSCSAVG00000007269	-	96	56.000	ENSATEG00000006315	rtca	96	56.000	Anabas_testudineus
ENSCSAVG00000007269	-	96	50.992	ENSAPLG00000015430	RTCA	100	50.992	Anas_platyrhynchos
ENSCSAVG00000007269	-	98	53.889	ENSANAG00000025446	RTCA	98	53.889	Aotus_nancymaae
ENSCSAVG00000007269	-	99	53.846	ENSACLG00000020770	rtca	99	53.846	Astatotilapia_calliptera
ENSCSAVG00000007269	-	99	53.846	ENSAMXG00000043271	rtca	99	53.846	Astyanax_mexicanus
ENSCSAVG00000007269	-	98	54.722	ENSBTAG00000006321	RTCA	98	54.722	Bos_taurus
ENSCSAVG00000007269	-	90	30.383	ENSCJAG00000011202	RCL1	95	30.473	Callithrix_jacchus
ENSCSAVG00000007269	-	98	53.889	ENSCJAG00000003398	RTCA	98	53.889	Callithrix_jacchus
ENSCSAVG00000007269	-	98	54.444	ENSCAFG00000020010	RTCA	67	54.444	Canis_familiaris
ENSCSAVG00000007269	-	98	54.444	ENSCAFG00020011528	RTCA	56	54.444	Canis_lupus_dingo
ENSCSAVG00000007269	-	98	54.722	ENSCHIG00000018937	RTCA	98	54.722	Capra_hircus
ENSCSAVG00000007269	-	98	54.722	ENSTSYG00000011305	RTCA	98	54.722	Carlito_syrichta
ENSCSAVG00000007269	-	98	53.889	ENSCCAG00000021844	RTCA	98	53.889	Cebus_capucinus
ENSCSAVG00000007269	-	98	52.011	ENSCATG00000019364	RTCA	100	52.751	Cercocebus_atys
ENSCSAVG00000007269	-	86	53.165	ENSCLAG00000006125	RTCA	100	53.165	Chinchilla_lanigera
ENSCSAVG00000007269	-	98	54.167	ENSCSAG00000001509	RTCA	98	54.167	Chlorocebus_sabaeus
ENSCSAVG00000007269	-	98	54.875	ENSCHOG00000005211	RTCA	98	54.875	Choloepus_hoffmanni
ENSCSAVG00000007269	-	99	53.463	ENSCPBG00000026658	RTCA	99	53.463	Chrysemys_picta_bellii
ENSCSAVG00000007269	-	95	30.110	ENSCPBG00000025481	RCL1	87	30.110	Chrysemys_picta_bellii
ENSCSAVG00000007269	-	100	93.132	ENSCING00000007875	-	100	93.132	Ciona_intestinalis
ENSCSAVG00000007269	-	98	54.444	ENSCANG00000040106	RTCA	98	54.444	Colobus_angolensis_palliatus
ENSCSAVG00000007269	-	95	30.028	ENSCGRG00001013748	Rcl1	95	30.110	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007269	-	73	54.275	ENSCGRG00001013163	Rtca	85	54.275	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007269	-	77	30.068	ENSCGRG00000005843	Rcl1	88	30.068	Cricetulus_griseus_crigri
ENSCSAVG00000007269	-	99	54.144	ENSCSEG00000000530	rtca	98	54.144	Cynoglossus_semilaevis
ENSCSAVG00000007269	-	98	45.429	ENSCVAG00000021809	rtca	98	45.429	Cyprinodon_variegatus
ENSCSAVG00000007269	-	99	53.444	ENSDARG00000002215	rtca	99	53.444	Danio_rerio
ENSCSAVG00000007269	-	67	30.620	ENSDNOG00000019911	RCL1	96	30.000	Dasypus_novemcinctus
ENSCSAVG00000007269	-	98	54.596	ENSDNOG00000000456	RTCA	98	54.596	Dasypus_novemcinctus
ENSCSAVG00000007269	-	98	55.000	ENSDORG00000005448	Rtca	98	55.000	Dipodomys_ordii
ENSCSAVG00000007269	-	99	36.944	FBgn0025630	Rtca	99	36.944	Drosophila_melanogaster
ENSCSAVG00000007269	-	94	44.638	ENSEBUG00000008556	rtca	94	44.638	Eptatretus_burgeri
ENSCSAVG00000007269	-	98	54.444	ENSEASG00005015926	RTCA	98	54.444	Equus_asinus_asinus
ENSCSAVG00000007269	-	98	54.444	ENSECAG00000019831	RTCA	98	54.444	Equus_caballus
ENSCSAVG00000007269	-	84	31.132	ENSECAG00000015973	RCL1	88	31.230	Equus_caballus
ENSCSAVG00000007269	-	90	49.706	ENSEEUG00000001165	RTCA	98	49.706	Erinaceus_europaeus
ENSCSAVG00000007269	-	99	54.270	ENSELUG00000003741	rtca	99	54.270	Esox_lucius
ENSCSAVG00000007269	-	98	54.722	ENSFCAG00000024460	RTCA	98	54.722	Felis_catus
ENSCSAVG00000007269	-	97	53.125	ENSFALG00000002443	RTCA	95	53.125	Ficedula_albicollis
ENSCSAVG00000007269	-	98	54.318	ENSFDAG00000012070	-	98	54.318	Fukomys_damarensis
ENSCSAVG00000007269	-	97	42.857	ENSFDAG00000016084	-	98	42.857	Fukomys_damarensis
ENSCSAVG00000007269	-	55	55.721	ENSFHEG00000002868	rtca	93	53.211	Fundulus_heteroclitus
ENSCSAVG00000007269	-	98	55.710	ENSGMOG00000013264	rtca	98	55.710	Gadus_morhua
ENSCSAVG00000007269	-	99	52.473	ENSGALG00000005277	RTCA	99	52.473	Gallus_gallus
ENSCSAVG00000007269	-	98	57.103	ENSGAFG00000011853	rtca	98	57.103	Gambusia_affinis
ENSCSAVG00000007269	-	99	54.294	ENSGACG00000013497	rtca	99	54.294	Gasterosteus_aculeatus
ENSCSAVG00000007269	-	80	52.397	ENSGAGG00000023306	RTCA	99	52.397	Gopherus_agassizii
ENSCSAVG00000007269	-	95	30.387	ENSGAGG00000003689	RCL1	95	30.387	Gopherus_agassizii
ENSCSAVG00000007269	-	98	53.889	ENSGGOG00000009546	-	100	52.751	Gorilla_gorilla
ENSCSAVG00000007269	-	98	53.333	ENSGGOG00000044018	-	98	53.333	Gorilla_gorilla
ENSCSAVG00000007269	-	99	53.846	ENSHBUG00000002114	rtca	99	53.846	Haplochromis_burtoni
ENSCSAVG00000007269	-	98	54.318	ENSHGLG00000002617	RTCA	98	54.318	Heterocephalus_glaber_female
ENSCSAVG00000007269	-	98	54.318	ENSHGLG00100006056	RTCA	98	54.318	Heterocephalus_glaber_male
ENSCSAVG00000007269	-	98	52.661	ENSHCOG00000020628	rtca	88	52.661	Hippocampus_comes
ENSCSAVG00000007269	-	99	54.396	ENSIPUG00000024803	rtca	99	54.396	Ictalurus_punctatus
ENSCSAVG00000007269	-	98	51.389	ENSSTOG00000013528	-	98	51.389	Ictidomys_tridecemlineatus
ENSCSAVG00000007269	-	98	50.000	ENSSTOG00000033099	-	98	50.000	Ictidomys_tridecemlineatus
ENSCSAVG00000007269	-	98	44.413	ENSJJAG00000016178	Rtca	97	44.413	Jaculus_jaculus
ENSCSAVG00000007269	-	98	54.875	ENSKMAG00000006651	rtca	98	54.875	Kryptolebias_marmoratus
ENSCSAVG00000007269	-	98	55.153	ENSLBEG00000028971	rtca	99	55.153	Labrus_bergylta
ENSCSAVG00000007269	-	87	54.062	ENSLBEG00000002448	-	99	54.062	Labrus_bergylta
ENSCSAVG00000007269	-	98	55.710	ENSLACG00000013666	RTCA	98	55.710	Latimeria_chalumnae
ENSCSAVG00000007269	-	98	54.469	ENSLOCG00000000093	rtca	98	54.469	Lepisosteus_oculatus
ENSCSAVG00000007269	-	98	54.318	ENSLAFG00000001473	RTCA	98	54.318	Loxodonta_africana
ENSCSAVG00000007269	-	98	54.167	ENSMFAG00000034132	RTCA	98	54.167	Macaca_fascicularis
ENSCSAVG00000007269	-	98	54.167	ENSMMUG00000019105	RTCA	98	54.167	Macaca_mulatta
ENSCSAVG00000007269	-	84	53.074	ENSMNEG00000037163	RTCA	100	53.074	Macaca_nemestrina
ENSCSAVG00000007269	-	87	30.675	ENSMNEG00000012288	RCL1	94	30.769	Macaca_nemestrina
ENSCSAVG00000007269	-	98	44.598	ENSMLEG00000042151	RTCA	98	44.598	Mandrillus_leucophaeus
ENSCSAVG00000007269	-	98	55.710	ENSMAMG00000016536	rtca	98	55.710	Mastacembelus_armatus
ENSCSAVG00000007269	-	99	53.846	ENSMZEG00005017945	rtca	99	53.846	Maylandia_zebra
ENSCSAVG00000007269	-	87	52.201	ENSMGAG00000006892	RTCA	99	52.201	Meleagris_gallopavo
ENSCSAVG00000007269	-	55	30.332	ENSMAUG00000008922	Rcl1	96	30.332	Mesocricetus_auratus
ENSCSAVG00000007269	-	98	54.167	ENSMAUG00000008488	Rtca	98	54.167	Mesocricetus_auratus
ENSCSAVG00000007269	-	84	53.398	ENSMICG00000008643	RTCA	100	53.398	Microcebus_murinus
ENSCSAVG00000007269	-	95	30.387	ENSMOCG00000012145	Rcl1	95	30.387	Microtus_ochrogaster
ENSCSAVG00000007269	-	98	54.444	ENSMOCG00000016660	Rtca	98	54.444	Microtus_ochrogaster
ENSCSAVG00000007269	-	84	54.575	ENSMMOG00000007750	rtca	99	54.575	Mola_mola
ENSCSAVG00000007269	-	98	55.833	ENSMODG00000003557	RTCA	98	55.833	Monodelphis_domestica
ENSCSAVG00000007269	-	98	55.710	ENSMALG00000020844	rtca	98	55.710	Monopterus_albus
ENSCSAVG00000007269	-	98	53.889	MGP_CAROLIEiJ_G0025565	Rtca	98	53.889	Mus_caroli
ENSCSAVG00000007269	-	95	30.303	MGP_CAROLIEiJ_G0022853	Rcl1	95	30.387	Mus_caroli
ENSCSAVG00000007269	-	98	53.333	ENSMUSG00000000339	Rtca	98	53.333	Mus_musculus
ENSCSAVG00000007269	-	95	30.387	ENSMUSG00000024785	Rcl1	95	30.387	Mus_musculus
ENSCSAVG00000007269	-	98	54.167	MGP_PahariEiJ_G0027011	Rtca	98	54.167	Mus_pahari
ENSCSAVG00000007269	-	95	30.028	MGP_PahariEiJ_G0014346	Rcl1	95	30.110	Mus_pahari
ENSCSAVG00000007269	-	98	53.889	MGP_SPRETEiJ_G0026515	Rtca	98	53.889	Mus_spretus
ENSCSAVG00000007269	-	95	30.028	MGP_SPRETEiJ_G0023771	Rcl1	95	30.110	Mus_spretus
ENSCSAVG00000007269	-	99	54.247	ENSMPUG00000012119	RTCA	99	54.247	Mustela_putorius_furo
ENSCSAVG00000007269	-	98	54.848	ENSMLUG00000009922	RTCA	98	54.848	Myotis_lucifugus
ENSCSAVG00000007269	-	95	30.028	ENSNGAG00000015327	Rcl1	95	30.110	Nannospalax_galili
ENSCSAVG00000007269	-	98	54.167	ENSNGAG00000011540	Rtca	98	54.167	Nannospalax_galili
ENSCSAVG00000007269	-	99	54.396	ENSNBRG00000003062	rtca	99	54.396	Neolamprologus_brichardi
ENSCSAVG00000007269	-	98	53.889	ENSNLEG00000031426	RTCA	98	53.889	Nomascus_leucogenys
ENSCSAVG00000007269	-	73	52.416	ENSOPRG00000012092	RTCA	71	52.416	Ochotona_princeps
ENSCSAVG00000007269	-	95	52.011	ENSODEG00000006990	RTCA	96	52.422	Octodon_degus
ENSCSAVG00000007269	-	99	53.846	ENSONIG00000007753	rtca	99	53.846	Oreochromis_niloticus
ENSCSAVG00000007269	-	86	52.050	ENSOANG00000012055	RTCA	98	52.050	Ornithorhynchus_anatinus
ENSCSAVG00000007269	-	98	55.278	ENSOCUG00000014247	RTCA	98	55.278	Oryctolagus_cuniculus
ENSCSAVG00000007269	-	98	55.989	ENSORLG00000013605	rtca	98	55.989	Oryzias_latipes
ENSCSAVG00000007269	-	98	56.267	ENSORLG00020001904	rtca	98	56.267	Oryzias_latipes_hni
ENSCSAVG00000007269	-	98	56.267	ENSORLG00015021064	rtca	98	56.267	Oryzias_latipes_hsok
ENSCSAVG00000007269	-	98	55.989	ENSOMEG00000000756	rtca	98	55.989	Oryzias_melastigma
ENSCSAVG00000007269	-	99	50.137	ENSOGAG00000005627	RTCA	99	50.137	Otolemur_garnettii
ENSCSAVG00000007269	-	87	53.459	ENSOARG00000018122	RTCA	100	53.459	Ovis_aries
ENSCSAVG00000007269	-	98	52.279	ENSPPAG00000035119	RTCA	100	53.074	Pan_paniscus
ENSCSAVG00000007269	-	98	54.722	ENSPPRG00000000350	RTCA	98	54.722	Panthera_pardus
ENSCSAVG00000007269	-	55	30.332	ENSPTIG00000019031	RCL1	96	30.332	Panthera_tigris_altaica
ENSCSAVG00000007269	-	98	54.444	ENSPTIG00000012816	RTCA	98	54.444	Panthera_tigris_altaica
ENSCSAVG00000007269	-	98	51.743	ENSPTRG00000001004	RTCA	100	52.427	Pan_troglodytes
ENSCSAVG00000007269	-	98	54.167	ENSPANG00000000346	RTCA	98	54.167	Papio_anubis
ENSCSAVG00000007269	-	99	54.945	ENSPKIG00000001653	rtca	99	54.945	Paramormyrops_kingsleyae
ENSCSAVG00000007269	-	99	53.297	ENSPSIG00000011408	RTCA	99	53.297	Pelodiscus_sinensis
ENSCSAVG00000007269	-	98	54.444	ENSPEMG00000018582	Rtca	98	54.444	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007269	-	95	30.028	ENSPEMG00000023275	Rcl1	95	30.110	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007269	-	98	47.632	ENSPMAG00000009110	rtca	98	47.632	Petromyzon_marinus
ENSCSAVG00000007269	-	98	55.833	ENSPCIG00000007684	RTCA	98	55.833	Phascolarctos_cinereus
ENSCSAVG00000007269	-	98	56.389	ENSPFOG00000004824	rtca	98	56.389	Poecilia_formosa
ENSCSAVG00000007269	-	98	56.546	ENSPLAG00000011753	rtca	98	56.546	Poecilia_latipinna
ENSCSAVG00000007269	-	98	56.546	ENSPMEG00000020469	rtca	98	56.546	Poecilia_mexicana
ENSCSAVG00000007269	-	98	57.382	ENSPREG00000001365	rtca	98	57.382	Poecilia_reticulata
ENSCSAVG00000007269	-	98	53.611	ENSPPYG00000001115	RTCA	98	53.611	Pongo_abelii
ENSCSAVG00000007269	-	79	31.419	ENSPCAG00000001440	RCL1	78	31.419	Procavia_capensis
ENSCSAVG00000007269	-	98	52.368	ENSPCAG00000005076	RTCA	98	52.368	Procavia_capensis
ENSCSAVG00000007269	-	98	54.722	ENSPCOG00000005603	RTCA	98	54.722	Propithecus_coquereli
ENSCSAVG00000007269	-	98	53.083	ENSPVAG00000009478	RTCA	98	53.083	Pteropus_vampyrus
ENSCSAVG00000007269	-	99	53.846	ENSPNYG00000004722	rtca	99	53.846	Pundamilia_nyererei
ENSCSAVG00000007269	-	99	53.846	ENSPNAG00000022270	rtca	99	53.846	Pygocentrus_nattereri
ENSCSAVG00000007269	-	98	54.167	ENSRNOG00000014575	Rtca	98	54.167	Rattus_norvegicus
ENSCSAVG00000007269	-	95	30.110	ENSRNOG00000015491	Rcl1	95	30.110	Rattus_norvegicus
ENSCSAVG00000007269	-	98	52.279	ENSRBIG00000041180	RTCA	100	53.074	Rhinopithecus_bieti
ENSCSAVG00000007269	-	98	54.167	ENSRROG00000024929	RTCA	98	54.167	Rhinopithecus_roxellana
ENSCSAVG00000007269	-	98	53.333	ENSSBOG00000028626	RTCA	98	53.333	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007269	-	84	30.818	ENSSBOG00000026369	RCL1	85	30.818	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007269	-	98	56.389	ENSSHAG00000001758	RTCA	98	56.389	Sarcophilus_harrisii
ENSCSAVG00000007269	-	96	54.674	ENSSMAG00000014680	rtca	95	54.674	Scophthalmus_maximus
ENSCSAVG00000007269	-	97	55.618	ENSSDUG00000015585	rtca	96	55.618	Seriola_dumerili
ENSCSAVG00000007269	-	95	55.908	ENSSLDG00000018985	rtca	94	55.908	Seriola_lalandi_dorsalis
ENSCSAVG00000007269	-	86	51.420	ENSSARG00000013993	RTCA	100	51.420	Sorex_araneus
ENSCSAVG00000007269	-	98	55.153	ENSSPAG00000011938	rtca	98	55.153	Stegastes_partitus
ENSCSAVG00000007269	-	98	55.000	ENSSSCG00000006865	RTCA	98	55.000	Sus_scrofa
ENSCSAVG00000007269	-	99	53.846	ENSTGUG00000005154	RTCA	99	53.846	Taeniopygia_guttata
ENSCSAVG00000007269	-	98	55.989	ENSTRUG00000008799	rtca	98	55.989	Takifugu_rubripes
ENSCSAVG00000007269	-	99	56.164	ENSTNIG00000004725	rtca	99	56.164	Tetraodon_nigroviridis
ENSCSAVG00000007269	-	57	46.154	ENSTBEG00000000943	RTCA	80	38.655	Tupaia_belangeri
ENSCSAVG00000007269	-	98	51.206	ENSTTRG00000015327	RTCA	98	51.206	Tursiops_truncatus
ENSCSAVG00000007269	-	92	54.627	ENSUAMG00000017265	RTCA	94	54.627	Ursus_americanus
ENSCSAVG00000007269	-	84	30.189	ENSUAMG00000005598	RCL1	97	30.284	Ursus_americanus
ENSCSAVG00000007269	-	98	54.722	ENSUMAG00000007881	RTCA	98	54.722	Ursus_maritimus
ENSCSAVG00000007269	-	86	47.003	ENSVPAG00000001039	RTCA	84	47.003	Vicugna_pacos
ENSCSAVG00000007269	-	98	54.444	ENSVVUG00000022041	RTCA	66	54.444	Vulpes_vulpes
ENSCSAVG00000007269	-	99	47.527	ENSXETG00000031661	RTCA	99	47.527	Xenopus_tropicalis
ENSCSAVG00000007269	-	98	50.139	ENSXCOG00000008002	rtca	98	50.139	Xiphophorus_couchianus
ENSCSAVG00000007269	-	98	57.103	ENSXMAG00000005482	rtca	98	57.103	Xiphophorus_maculatus