EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007277 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 14242 bases
Position: chrreftig_49:394058-408299
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012372	ResIII	PF04851.15	1.2e-07	1	1
ENSCSAVP00000012372	DEAD	PF00270.29	5e-20	1	1
ENSCSAVP00000012373	DEAD	PF00270.29	7.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012515	-	2382	-	ENSCSAVP00000012372	794 (aa)	-	H2Z460
ENSCSAVT00000012516	-	1797	-	ENSCSAVP00000012373	599 (aa)	-	H2Z461

Gene Model

Click here to download ENSCSAVG00000007277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007277	-	100	44.478	ENSGACG00000016100	polq	91	46.039	Gasterosteus_aculeatus
ENSCSAVG00000007277	-	100	46.481	MGP_CAROLIEiJ_G0020725	Polq	50	57.303	Mus_caroli
ENSCSAVG00000007277	-	100	46.675	ENSMUSG00000034206	Polq	50	57.303	Mus_musculus
ENSCSAVG00000007277	-	100	46.433	MGP_PahariEiJ_G0016426	Polq	51	56.180	Mus_pahari
ENSCSAVG00000007277	-	100	46.359	MGP_SPRETEiJ_G0021625	Polq	50	57.303	Mus_spretus
ENSCSAVG00000007277	-	87	44.768	ENSTNIG00000017816	-	99	46.667	Tetraodon_nigroviridis
ENSCSAVG00000007277	-	100	46.450	ENSXETG00000009913	polq	78	45.455	Xenopus_tropicalis