EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000007312 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
8717 bases
Position
chrreftig_25:611651-620367
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000012455Beta-CaspPF10996.83.3e-2811
ENSCSAVP00000012453Beta-CaspPF10996.83.6e-2811
ENSCSAVP00000012454Beta-CaspPF10996.83.8e-2811
ENSCSAVP00000012454Lactamase_BPF00753.272e-1011
ENSCSAVP00000012453Lactamase_BPF00753.272.3e-1011
ENSCSAVP00000012455Lactamase_BPF00753.273.7e-1011
ENSCSAVP00000012455RMMBLPF07521.122.1e-1611
ENSCSAVP00000012453RMMBLPF07521.122.2e-1611
ENSCSAVP00000012454RMMBLPF07521.122.3e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000012599-1926-ENSCSAVP00000012455580 (aa)-H2Z4E3
ENSCSAVT00000012598-2019-ENSCSAVP00000012454612 (aa)-H2Z4E2
ENSCSAVT00000012597-2069-ENSCSAVP00000012453602 (aa)-H2Z4E1
Gene Model
Click here to download ENSCSAVG00000007312's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007312's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000007312-9968.447ENSG00000127054INTS1110085.321Homo_sapiens
ENSCSAVG00000007312-9969.064ENSAPOG00000022656ints119969.064Acanthochromis_polyacanthus
ENSCSAVG00000007312-9968.447ENSAMEG00000013755INTS119968.447Ailuropoda_melanoleuca
ENSCSAVG00000007312-9969.064ENSACIG00000016715ints119969.064Amphilophus_citrinellus
ENSCSAVG00000007312-9968.729ENSAOCG00000021172ints119968.729Amphiprion_ocellaris
ENSCSAVG00000007312-9968.729ENSAPEG00000024732ints119968.729Amphiprion_percula
ENSCSAVG00000007312-9968.729ENSATEG00000024376ints119968.729Anabas_testudineus
ENSCSAVG00000007312-9970.100ENSAPLG00000005238INTS119970.100Anas_platyrhynchos
ENSCSAVG00000007312-9969.616ENSACAG00000013975INTS119969.616Anolis_carolinensis
ENSCSAVG00000007312-9968.447ENSANAG00000034133INTS119979.104Aotus_nancymaae
ENSCSAVG00000007312-9769.535ENSACLG00000018782ints119968.366Astatotilapia_calliptera
ENSCSAVG00000007312-9969.732ENSAMXG00000038758ints119969.732Astyanax_mexicanus
ENSCSAVG00000007312-9967.947ENSBTAG00000007620INTS119967.947Bos_taurus
ENSCSAVG00000007312-8465.490WBGene00008642F10B5.88365.490Caenorhabditis_elegans
ENSCSAVG00000007312-9968.447ENSCJAG00000011144INTS119979.104Callithrix_jacchus
ENSCSAVG00000007312-9968.614ENSCAFG00000019287INTS119968.614Canis_familiaris
ENSCSAVG00000007312-9968.614ENSCAFG00020011566INTS119968.614Canis_lupus_dingo
ENSCSAVG00000007312-9967.947ENSCHIG00000023117INTS119967.947Capra_hircus
ENSCSAVG00000007312-9966.500ENSTSYG00000012018INTS119976.027Carlito_syrichta
ENSCSAVG00000007312-9955.286ENSCAPG00000012788INTS119955.286Cavia_aperea
ENSCSAVG00000007312-9968.614ENSCPOG00000005152INTS119968.614Cavia_porcellus
ENSCSAVG00000007312-9968.447ENSCCAG00000026348INTS119979.104Cebus_capucinus
ENSCSAVG00000007312-9968.614ENSCATG00000005882INTS119979.104Cercocebus_atys
ENSCSAVG00000007312-9968.447ENSCLAG00000004586INTS119968.447Chinchilla_lanigera
ENSCSAVG00000007312-9968.614ENSCSAG00000000681INTS119968.614Chlorocebus_sabaeus
ENSCSAVG00000007312-9957.429ENSCPBG00000022634INTS119957.429Chrysemys_picta_bellii
ENSCSAVG00000007312-10092.397ENSCING00000002398-10092.397Ciona_intestinalis
ENSCSAVG00000007312-9968.614ENSCANG00000034418INTS119979.104Colobus_angolensis_palliatus
ENSCSAVG00000007312-9968.781ENSCGRG00001013448Ints119968.781Cricetulus_griseus_chok1gshd
ENSCSAVG00000007312-9968.781ENSCGRG00000006961Ints119968.781Cricetulus_griseus_crigri
ENSCSAVG00000007312-9968.562ENSCSEG00000017374ints119968.562Cynoglossus_semilaevis
ENSCSAVG00000007312-9966.722ENSCVAG00000008788ints119966.722Cyprinodon_variegatus
ENSCSAVG00000007312-9969.231ENSDARG00000025212ints1110084.305Danio_rerio
ENSCSAVG00000007312-9965.776ENSDNOG00000025863INTS118479.167Dasypus_novemcinctus
ENSCSAVG00000007312-9868.421ENSDORG00000002045Ints119968.421Dipodomys_ordii
ENSCSAVG00000007312-9966.443FBgn0039691IntS119966.443Drosophila_melanogaster
ENSCSAVG00000007312-8365.139ENSETEG00000002094INTS1110065.139Echinops_telfairi
ENSCSAVG00000007312-9970.903ENSEBUG00000003190-9179.914Eptatretus_burgeri
ENSCSAVG00000007312-9969.167ENSEASG00005014989INTS117767.311Equus_asinus_asinus
ENSCSAVG00000007312-9968.833ENSECAG00000023292INTS117068.833Equus_caballus
ENSCSAVG00000007312-9969.449ENSEEUG00000000838INTS119969.449Erinaceus_europaeus
ENSCSAVG00000007312-9969.565ENSELUG00000004815ints119969.565Esox_lucius
ENSCSAVG00000007312-9968.885ENSFCAG00000007618INTS119979.851Felis_catus
ENSCSAVG00000007312-9968.447ENSFALG00000009231INTS119968.447Ficedula_albicollis
ENSCSAVG00000007312-9968.948ENSFDAG00000009131INTS119968.948Fukomys_damarensis
ENSCSAVG00000007312-9969.064ENSFHEG00000007863ints119969.064Fundulus_heteroclitus
ENSCSAVG00000007312-9969.115ENSGMOG00000006721ints119969.115Gadus_morhua
ENSCSAVG00000007312-9970.451ENSGALG00000001691INTS119970.451Gallus_gallus
ENSCSAVG00000007312-9961.881ENSGAFG00000019948ints119961.881Gambusia_affinis
ENSCSAVG00000007312-9969.064ENSGACG00000011260ints119969.064Gasterosteus_aculeatus
ENSCSAVG00000007312-9969.950ENSGAGG00000015874INTS119969.950Gopherus_agassizii
ENSCSAVG00000007312-9968.614ENSGGOG00000005366INTS119979.104Gorilla_gorilla
ENSCSAVG00000007312-9969.231ENSHBUG00000006820ints119969.231Haplochromis_burtoni
ENSCSAVG00000007312-9968.803ENSHGLG00000017561INTS119868.803Heterocephalus_glaber_female
ENSCSAVG00000007312-9968.803ENSHGLG00100014276INTS119868.803Heterocephalus_glaber_male
ENSCSAVG00000007312-9968.896ENSHCOG00000013135ints119968.896Hippocampus_comes
ENSCSAVG00000007312-9968.562ENSIPUG00000022761cpsf3l9968.562Ictalurus_punctatus
ENSCSAVG00000007312-9868.697ENSSTOG00000020019INTS119868.697Ictidomys_tridecemlineatus
ENSCSAVG00000007312-9967.764ENSJJAG00000008717Ints119967.764Jaculus_jaculus
ENSCSAVG00000007312-9968.729ENSKMAG00000003315ints119968.729Kryptolebias_marmoratus
ENSCSAVG00000007312-9768.601ENSLBEG00000011392ints119968.601Labrus_bergylta
ENSCSAVG00000007312-9958.278ENSLACG00000018802INTS119958.278Latimeria_chalumnae
ENSCSAVG00000007312-9966.167ENSLOCG00000002177ints119966.167Lepisosteus_oculatus
ENSCSAVG00000007312-9967.893ENSLAFG00000013687INTS119967.893Loxodonta_africana
ENSCSAVG00000007312-9968.614ENSMFAG00000044583INTS119979.104Macaca_fascicularis
ENSCSAVG00000007312-9968.350ENSMMUG00000013866INTS119679.365Macaca_mulatta
ENSCSAVG00000007312-9968.624ENSMNEG00000030021INTS119979.104Macaca_nemestrina
ENSCSAVG00000007312-9276.190ENSMLEG00000044372INTS119979.104Mandrillus_leucophaeus
ENSCSAVG00000007312-9969.833ENSMAMG00000004522ints119969.833Mastacembelus_armatus
ENSCSAVG00000007312-9969.064ENSMZEG00005023352ints119969.064Maylandia_zebra
ENSCSAVG00000007312-9970.451ENSMGAG00000002879INTS119970.451Meleagris_gallopavo
ENSCSAVG00000007312-9968.781ENSMAUG00000010199Ints119968.781Mesocricetus_auratus
ENSCSAVG00000007312-9968.280ENSMICG00000014186INTS119976.582Microcebus_murinus
ENSCSAVG00000007312-9968.781ENSMOCG00000021304Ints119968.781Microtus_ochrogaster
ENSCSAVG00000007312-9962.040ENSMMOG00000015040ints119962.040Mola_mola
ENSCSAVG00000007312-9969.783ENSMODG00000006290INTS119969.783Monodelphis_domestica
ENSCSAVG00000007312-9968.562ENSMALG00000002210ints119968.562Monopterus_albus
ENSCSAVG00000007312-9968.614MGP_CAROLIEiJ_G0026910Ints119968.614Mus_caroli
ENSCSAVG00000007312-9968.614ENSMUSG00000029034Ints119968.614Mus_musculus
ENSCSAVG00000007312-9968.614MGP_PahariEiJ_G0029259Ints119968.614Mus_pahari
ENSCSAVG00000007312-9968.614MGP_SPRETEiJ_G0027905Ints119968.614Mus_spretus
ENSCSAVG00000007312-9568.421ENSMPUG00000014311INTS119968.421Mustela_putorius_furo
ENSCSAVG00000007312-9968.781ENSNGAG00000010139Ints119968.781Nannospalax_galili
ENSCSAVG00000007312-9963.880ENSNBRG00000002564ints119963.880Neolamprologus_brichardi
ENSCSAVG00000007312-8173.361ENSNLEG00000000053INTS119076.190Nomascus_leucogenys
ENSCSAVG00000007312-9766.724ENSMEUG00000011664INTS119966.724Notamacropus_eugenii
ENSCSAVG00000007312-5485.401ENSOPRG00000001794-8385.401Ochotona_princeps
ENSCSAVG00000007312-9968.447ENSODEG00000009761INTS119968.447Octodon_degus
ENSCSAVG00000007312-9969.398ENSONIG00000016600ints119969.398Oreochromis_niloticus
ENSCSAVG00000007312-8151.815ENSOANG00000013023-9951.107Ornithorhynchus_anatinus
ENSCSAVG00000007312-9968.114ENSORLG00000015957ints119968.114Oryzias_latipes
ENSCSAVG00000007312-9968.114ENSORLG00020008544ints119968.114Oryzias_latipes_hni
ENSCSAVG00000007312-9968.114ENSORLG00015003381ints119968.114Oryzias_latipes_hsok
ENSCSAVG00000007312-9968.687ENSOMEG00000018159ints119968.687Oryzias_melastigma
ENSCSAVG00000007312-9968.000ENSOGAG00000000463INTS119968.000Otolemur_garnettii
ENSCSAVG00000007312-9077.696ENSOARG00000004725INTS119777.696Ovis_aries
ENSCSAVG00000007312-9968.447ENSPPAG00000037865INTS119979.104Pan_paniscus
ENSCSAVG00000007312-9968.885ENSPPRG00000021402INTS119979.851Panthera_pardus
ENSCSAVG00000007312-9968.855ENSPTIG00000019834INTS119580.800Panthera_tigris_altaica
ENSCSAVG00000007312-9968.447ENSPTRG00000051102INTS119979.104Pan_troglodytes
ENSCSAVG00000007312-9968.614ENSPANG00000019349INTS119979.104Papio_anubis
ENSCSAVG00000007312-9970.067ENSPKIG00000008091ints119970.067Paramormyrops_kingsleyae
ENSCSAVG00000007312-9969.732ENSPSIG00000002824INTS119969.732Pelodiscus_sinensis
ENSCSAVG00000007312-9769.363ENSPMGG00000006430ints119669.363Periophthalmus_magnuspinnatus
ENSCSAVG00000007312-9968.781ENSPEMG00000018526Ints119968.781Peromyscus_maniculatus_bairdii
ENSCSAVG00000007312-7162.179ENSPCIG00000023187-9962.179Phascolarctos_cinereus
ENSCSAVG00000007312-9970.284ENSPCIG00000007815-9970.284Phascolarctos_cinereus
ENSCSAVG00000007312-9968.948ENSPFOG00000008512ints119968.948Poecilia_formosa
ENSCSAVG00000007312-9969.064ENSPLAG00000019195ints119969.064Poecilia_latipinna
ENSCSAVG00000007312-9969.064ENSPMEG00000018956ints119969.064Poecilia_mexicana
ENSCSAVG00000007312-9969.064ENSPREG00000021516ints119969.064Poecilia_reticulata
ENSCSAVG00000007312-9864.815ENSPPYG00000002013INTS119964.815Pongo_abelii
ENSCSAVG00000007312-6979.781ENSPCAG00000002309INTS116979.781Procavia_capensis
ENSCSAVG00000007312-9968.447ENSPCOG00000016861INTS119975.556Propithecus_coquereli
ENSCSAVG00000007312-9968.114ENSPVAG00000001017INTS119968.114Pteropus_vampyrus
ENSCSAVG00000007312-9969.231ENSPNYG00000021238ints119969.231Pundamilia_nyererei
ENSCSAVG00000007312-9969.398ENSPNAG00000022204ints119969.398Pygocentrus_nattereri
ENSCSAVG00000007312-9968.781ENSRNOG00000019712Ints119968.781Rattus_norvegicus
ENSCSAVG00000007312-9968.456ENSRBIG00000039487INTS119979.365Rhinopithecus_bieti
ENSCSAVG00000007312-5958.065ENSRROG00000039631INTS119958.065Rhinopithecus_roxellana
ENSCSAVG00000007312-9968.614ENSSBOG00000018848INTS119976.190Saimiri_boliviensis_boliviensis
ENSCSAVG00000007312-9970.284ENSSFOG00015020610cpsf3l9970.284Scleropages_formosus
ENSCSAVG00000007312-9968.562ENSSMAG00000019579ints119968.562Scophthalmus_maximus
ENSCSAVG00000007312-9968.729ENSSDUG00000003980ints119968.729Seriola_dumerili
ENSCSAVG00000007312-9968.729ENSSLDG00000017198ints119968.729Seriola_lalandi_dorsalis
ENSCSAVG00000007312-9970.067ENSSPUG00000016767INTS1110078.571Sphenodon_punctatus
ENSCSAVG00000007312-9969.064ENSSPAG00000018290ints119969.064Stegastes_partitus
ENSCSAVG00000007312-9968.280ENSSSCG00000003339INTS119968.280Sus_scrofa
ENSCSAVG00000007312-9870.458ENSTGUG00000003192-9970.458Taeniopygia_guttata
ENSCSAVG00000007312-9969.398ENSTRUG00000005523ints119969.398Takifugu_rubripes
ENSCSAVG00000007312-9968.729ENSTNIG00000012415ints119968.729Tetraodon_nigroviridis
ENSCSAVG00000007312-8868.985ENSTBEG00000005377INTS119968.985Tupaia_belangeri
ENSCSAVG00000007312-9957.143ENSTTRG00000017031INTS119957.143Tursiops_truncatus
ENSCSAVG00000007312-9968.614ENSUAMG00000012804INTS119968.614Ursus_americanus
ENSCSAVG00000007312-9868.644ENSUMAG00000002070INTS119868.644Ursus_maritimus
ENSCSAVG00000007312-5972.103ENSVPAG00000005134-7572.103Vicugna_pacos
ENSCSAVG00000007312-9968.614ENSVVUG00000004350INTS119968.614Vulpes_vulpes
ENSCSAVG00000007312-9970.117ENSXETG00000030716INTS119970.117Xenopus_tropicalis
ENSCSAVG00000007312-9967.014ENSXCOG00000015382ints119967.014Xiphophorus_couchianus
ENSCSAVG00000007312-9968.896ENSXMAG00000012456ints119968.896Xiphophorus_maculatus

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