EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007328 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1519 bases
Position: chrreftig_140:704569-706087
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012482	DUF1325	PF07039.11	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012626	-	798	-	ENSCSAVP00000012482	241 (aa)	-	H2Z4H0

Gene Model

Click here to download ENSCSAVG00000007328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007328	-	87	57.143	ENSG00000176476	SGF29	72	57.143	Homo_sapiens
ENSCSAVG00000007328	-	86	57.488	ENSAPOG00000007072	sgf29	71	57.488	Acanthochromis_polyacanthus
ENSCSAVG00000007328	-	87	54.762	ENSAMEG00000015388	SGF29	71	54.762	Ailuropoda_melanoleuca
ENSCSAVG00000007328	-	69	60.843	ENSACIG00000024432	sgf29	67	60.843	Amphilophus_citrinellus
ENSCSAVG00000007328	-	86	57.488	ENSAOCG00000013494	sgf29	71	57.488	Amphiprion_ocellaris
ENSCSAVG00000007328	-	86	57.488	ENSAPEG00000007284	sgf29	77	57.488	Amphiprion_percula
ENSCSAVG00000007328	-	86	57.488	ENSATEG00000017566	sgf29	71	57.488	Anabas_testudineus
ENSCSAVG00000007328	-	87	57.143	ENSACAG00000006595	SGF29	72	57.143	Anolis_carolinensis
ENSCSAVG00000007328	-	87	57.143	ENSANAG00000037641	-	72	57.143	Aotus_nancymaae
ENSCSAVG00000007328	-	87	51.429	ENSANAG00000032813	-	75	51.429	Aotus_nancymaae
ENSCSAVG00000007328	-	87	51.905	ENSANAG00000023337	-	66	51.905	Aotus_nancymaae
ENSCSAVG00000007328	-	86	57.971	ENSACLG00000016730	sgf29	71	57.971	Astatotilapia_calliptera
ENSCSAVG00000007328	-	87	55.556	ENSAMXG00000003395	sgf29	72	55.556	Astyanax_mexicanus
ENSCSAVG00000007328	-	87	57.143	ENSBTAG00000016883	SGF29	72	57.143	Bos_taurus
ENSCSAVG00000007328	-	87	57.143	ENSCJAG00000006577	SGF29	72	57.143	Callithrix_jacchus
ENSCSAVG00000007328	-	87	57.143	ENSCAFG00000017127	SGF29	69	57.143	Canis_familiaris
ENSCSAVG00000007328	-	87	57.143	ENSCAFG00020017597	SGF29	69	57.143	Canis_lupus_dingo
ENSCSAVG00000007328	-	87	57.143	ENSCHIG00000015325	SGF29	72	57.143	Capra_hircus
ENSCSAVG00000007328	-	87	57.143	ENSTSYG00000025878	-	72	57.143	Carlito_syrichta
ENSCSAVG00000007328	-	67	57.764	ENSTSYG00000003314	-	63	57.764	Carlito_syrichta
ENSCSAVG00000007328	-	77	54.255	ENSCAPG00000000732	SGF29	73	54.255	Cavia_aperea
ENSCSAVG00000007328	-	87	57.619	ENSCPOG00000027037	SGF29	72	57.619	Cavia_porcellus
ENSCSAVG00000007328	-	87	57.143	ENSCCAG00000027359	-	72	57.143	Cebus_capucinus
ENSCSAVG00000007328	-	87	57.143	ENSCATG00000034020	SGF29	72	57.143	Cercocebus_atys
ENSCSAVG00000007328	-	87	57.619	ENSCLAG00000011510	SGF29	72	57.619	Chinchilla_lanigera
ENSCSAVG00000007328	-	87	52.074	ENSCSAG00000006259	SGF29	72	52.074	Chlorocebus_sabaeus
ENSCSAVG00000007328	-	87	35.238	ENSCHOG00000013831	-	82	35.238	Choloepus_hoffmanni
ENSCSAVG00000007328	-	90	55.300	ENSCPBG00000012638	SGF29	66	55.300	Chrysemys_picta_bellii
ENSCSAVG00000007328	-	87	90.000	ENSCING00000012953	-	72	90.000	Ciona_intestinalis
ENSCSAVG00000007328	-	87	56.667	ENSCANG00000039654	SGF29	84	56.667	Colobus_angolensis_palliatus
ENSCSAVG00000007328	-	87	57.143	ENSCGRG00001016730	-	72	57.143	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007328	-	87	55.238	ENSCGRG00001014941	-	71	55.238	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007328	-	87	56.667	ENSCGRG00000003808	Sgf29	72	56.667	Cricetulus_griseus_crigri
ENSCSAVG00000007328	-	65	61.146	ENSCSEG00000010575	sgf29	57	61.006	Cynoglossus_semilaevis
ENSCSAVG00000007328	-	86	57.488	ENSCVAG00000014381	sgf29	71	57.488	Cyprinodon_variegatus
ENSCSAVG00000007328	-	87	57.143	ENSDARG00000002339	sgf29	99	57.143	Danio_rerio
ENSCSAVG00000007328	-	87	57.143	ENSDNOG00000048338	SGF29	71	57.143	Dasypus_novemcinctus
ENSCSAVG00000007328	-	87	57.619	ENSDORG00000007002	Sgf29	72	57.619	Dipodomys_ordii
ENSCSAVG00000007328	-	64	46.753	FBgn0050390	Sgf29	51	46.753	Drosophila_melanogaster
ENSCSAVG00000007328	-	87	57.346	ENSEBUG00000008631	sgf29	71	57.346	Eptatretus_burgeri
ENSCSAVG00000007328	-	85	54.369	ENSEASG00005014751	SGF29	69	54.369	Equus_asinus_asinus
ENSCSAVG00000007328	-	91	55.455	ENSECAG00000011445	SGF29	71	55.455	Equus_caballus
ENSCSAVG00000007328	-	77	57.838	ENSEEUG00000008521	SGF29	69	57.838	Erinaceus_europaeus
ENSCSAVG00000007328	-	86	57.005	ENSELUG00000023888	sgf29	71	57.005	Esox_lucius
ENSCSAVG00000007328	-	87	57.143	ENSFCAG00000012297	SGF29	72	57.143	Felis_catus
ENSCSAVG00000007328	-	87	57.619	ENSFDAG00000012928	SGF29	72	57.619	Fukomys_damarensis
ENSCSAVG00000007328	-	86	57.488	ENSFHEG00000022427	sgf29	77	57.488	Fundulus_heteroclitus
ENSCSAVG00000007328	-	86	54.808	ENSGMOG00000000328	sgf29	71	54.808	Gadus_morhua
ENSCSAVG00000007328	-	87	55.714	ENSGALG00000020590	SGF29	72	55.714	Gallus_gallus
ENSCSAVG00000007328	-	86	57.488	ENSGAFG00000020626	sgf29	71	57.488	Gambusia_affinis
ENSCSAVG00000007328	-	86	56.039	ENSGACG00000015001	sgf29	72	56.039	Gasterosteus_aculeatus
ENSCSAVG00000007328	-	87	56.667	ENSGAGG00000012655	SGF29	72	56.667	Gopherus_agassizii
ENSCSAVG00000007328	-	87	57.143	ENSGGOG00000000807	-	72	57.143	Gorilla_gorilla
ENSCSAVG00000007328	-	64	59.740	ENSHBUG00000013677	sgf29	63	59.740	Haplochromis_burtoni
ENSCSAVG00000007328	-	87	57.619	ENSHGLG00000014468	SGF29	72	57.619	Heterocephalus_glaber_female
ENSCSAVG00000007328	-	87	57.619	ENSHGLG00100000132	SGF29	72	57.619	Heterocephalus_glaber_male
ENSCSAVG00000007328	-	86	57.005	ENSHCOG00000002018	sgf29	71	57.005	Hippocampus_comes
ENSCSAVG00000007328	-	89	56.542	ENSIPUG00000001851	sgf29	72	57.619	Ictalurus_punctatus
ENSCSAVG00000007328	-	87	57.143	ENSSTOG00000013258	SGF29	72	57.143	Ictidomys_tridecemlineatus
ENSCSAVG00000007328	-	87	57.143	ENSJJAG00000009013	Sgf29	72	57.143	Jaculus_jaculus
ENSCSAVG00000007328	-	86	58.937	ENSKMAG00000004341	sgf29	70	58.937	Kryptolebias_marmoratus
ENSCSAVG00000007328	-	65	60.256	ENSLBEG00000006754	sgf29	62	60.256	Labrus_bergylta
ENSCSAVG00000007328	-	66	46.250	ENSLACG00000005336	SGF29	65	46.250	Latimeria_chalumnae
ENSCSAVG00000007328	-	87	57.143	ENSLAFG00000028439	SGF29	72	57.143	Loxodonta_africana
ENSCSAVG00000007328	-	87	57.143	ENSMFAG00000038040	SGF29	72	57.143	Macaca_fascicularis
ENSCSAVG00000007328	-	87	57.143	ENSMMUG00000011370	SGF29	72	57.143	Macaca_mulatta
ENSCSAVG00000007328	-	87	57.143	ENSMNEG00000043534	SGF29	72	57.143	Macaca_nemestrina
ENSCSAVG00000007328	-	87	57.143	ENSMLEG00000031039	SGF29	72	57.143	Mandrillus_leucophaeus
ENSCSAVG00000007328	-	86	57.488	ENSMAMG00000017907	sgf29	71	57.488	Mastacembelus_armatus
ENSCSAVG00000007328	-	86	57.971	ENSMZEG00005001194	sgf29	71	57.971	Maylandia_zebra
ENSCSAVG00000007328	-	86	57.971	ENSMZEG00005002947	sgf29	71	57.971	Maylandia_zebra
ENSCSAVG00000007328	-	87	55.714	ENSMGAG00000012201	SGF29	72	55.714	Meleagris_gallopavo
ENSCSAVG00000007328	-	87	57.143	ENSMAUG00000011063	Sgf29	72	57.143	Mesocricetus_auratus
ENSCSAVG00000007328	-	87	57.143	ENSMICG00000009973	SGF29	72	57.143	Microcebus_murinus
ENSCSAVG00000007328	-	87	57.143	ENSMOCG00000021358	Sgf29	72	57.143	Microtus_ochrogaster
ENSCSAVG00000007328	-	66	59.119	ENSMMOG00000012706	sgf29	62	59.119	Mola_mola
ENSCSAVG00000007328	-	87	56.667	ENSMODG00000015642	SGF29	72	56.667	Monodelphis_domestica
ENSCSAVG00000007328	-	86	57.488	ENSMALG00000000231	sgf29	69	57.488	Monopterus_albus
ENSCSAVG00000007328	-	87	57.619	MGP_CAROLIEiJ_G0030456	Sgf29	63	71.000	Mus_caroli
ENSCSAVG00000007328	-	87	57.619	ENSMUSG00000030714	Sgf29	63	71.000	Mus_musculus
ENSCSAVG00000007328	-	87	57.619	MGP_PahariEiJ_G0013666	Sgf29	63	71.000	Mus_pahari
ENSCSAVG00000007328	-	87	57.619	MGP_SPRETEiJ_G0031570	Sgf29	63	71.000	Mus_spretus
ENSCSAVG00000007328	-	87	57.143	ENSMPUG00000012669	SGF29	72	57.143	Mustela_putorius_furo
ENSCSAVG00000007328	-	87	57.143	ENSMLUG00000022554	SGF29	72	57.143	Myotis_lucifugus
ENSCSAVG00000007328	-	87	57.619	ENSNGAG00000022634	Sgf29	72	57.619	Nannospalax_galili
ENSCSAVG00000007328	-	69	60.843	ENSNBRG00000020775	sgf29	67	60.843	Neolamprologus_brichardi
ENSCSAVG00000007328	-	87	54.762	ENSNLEG00000001604	SGF29	75	54.762	Nomascus_leucogenys
ENSCSAVG00000007328	-	87	57.143	ENSOPRG00000009316	SGF29	72	57.143	Ochotona_princeps
ENSCSAVG00000007328	-	87	57.143	ENSODEG00000013702	SGF29	72	57.143	Octodon_degus
ENSCSAVG00000007328	-	86	57.692	ENSONIG00000009377	sgf29	71	57.692	Oreochromis_niloticus
ENSCSAVG00000007328	-	63	62.092	ENSOANG00000009696	SGF29	77	62.092	Ornithorhynchus_anatinus
ENSCSAVG00000007328	-	78	57.754	ENSOCUG00000025361	-	69	57.754	Oryctolagus_cuniculus
ENSCSAVG00000007328	-	64	38.065	ENSOCUG00000021684	-	55	38.065	Oryctolagus_cuniculus
ENSCSAVG00000007328	-	86	57.488	ENSORLG00000027873	sgf29	71	57.488	Oryzias_latipes
ENSCSAVG00000007328	-	86	57.488	ENSORLG00020020976	-	71	57.488	Oryzias_latipes_hni
ENSCSAVG00000007328	-	86	57.488	ENSORLG00015011795	sgf29	71	57.488	Oryzias_latipes_hsok
ENSCSAVG00000007328	-	86	57.488	ENSOMEG00000020118	sgf29	71	57.488	Oryzias_melastigma
ENSCSAVG00000007328	-	87	53.810	ENSOGAG00000015794	-	72	53.810	Otolemur_garnettii
ENSCSAVG00000007328	-	84	41.748	ENSOGAG00000034571	-	68	41.748	Otolemur_garnettii
ENSCSAVG00000007328	-	87	57.143	ENSOARG00000003226	SGF29	72	57.143	Ovis_aries
ENSCSAVG00000007328	-	87	57.143	ENSPPAG00000039380	SGF29	69	57.143	Pan_paniscus
ENSCSAVG00000007328	-	87	57.143	ENSPPRG00000006831	SGF29	72	57.143	Panthera_pardus
ENSCSAVG00000007328	-	87	57.143	ENSPTIG00000014381	SGF29	72	57.143	Panthera_tigris_altaica
ENSCSAVG00000007328	-	87	35.909	ENSPTRG00000007925	SGF29	69	37.500	Pan_troglodytes
ENSCSAVG00000007328	-	87	57.143	ENSPANG00000019684	SGF29	72	57.143	Papio_anubis
ENSCSAVG00000007328	-	87	56.667	ENSPKIG00000018503	sgf29	70	51.429	Paramormyrops_kingsleyae
ENSCSAVG00000007328	-	86	52.657	ENSPMGG00000006683	sgf29	70	52.657	Periophthalmus_magnuspinnatus
ENSCSAVG00000007328	-	87	56.667	ENSPCIG00000025200	SGF29	72	56.667	Phascolarctos_cinereus
ENSCSAVG00000007328	-	86	57.488	ENSPFOG00000010035	sgf29	71	57.488	Poecilia_formosa
ENSCSAVG00000007328	-	86	57.488	ENSPLAG00000000559	sgf29	71	57.488	Poecilia_latipinna
ENSCSAVG00000007328	-	86	57.488	ENSPMEG00000007026	sgf29	71	57.488	Poecilia_mexicana
ENSCSAVG00000007328	-	86	57.488	ENSPREG00000011868	sgf29	71	57.488	Poecilia_reticulata
ENSCSAVG00000007328	-	87	57.143	ENSPPYG00000007233	SGF29	72	57.143	Pongo_abelii
ENSCSAVG00000007328	-	87	57.143	ENSPCOG00000028233	SGF29	72	57.143	Propithecus_coquereli
ENSCSAVG00000007328	-	86	57.971	ENSPNYG00000012353	sgf29	73	57.971	Pundamilia_nyererei
ENSCSAVG00000007328	-	69	60.241	ENSPNAG00000014651	sgf29	67	60.241	Pygocentrus_nattereri
ENSCSAVG00000007328	-	87	57.619	ENSRNOG00000019245	Sgf29	79	57.619	Rattus_norvegicus
ENSCSAVG00000007328	-	87	57.143	ENSRBIG00000041003	SGF29	72	57.143	Rhinopithecus_bieti
ENSCSAVG00000007328	-	87	57.143	ENSRROG00000044894	SGF29	72	57.143	Rhinopithecus_roxellana
ENSCSAVG00000007328	-	76	58.470	ENSSBOG00000008004	SGF29	67	60.241	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007328	-	87	56.667	ENSSHAG00000011279	-	72	56.667	Sarcophilus_harrisii
ENSCSAVG00000007328	-	71	38.012	ENSSHAG00000002930	-	69	38.012	Sarcophilus_harrisii
ENSCSAVG00000007328	-	87	50.952	ENSSFOG00015001254	sgf29	70	50.952	Scleropages_formosus
ENSCSAVG00000007328	-	86	57.488	ENSSMAG00000016613	sgf29	71	57.488	Scophthalmus_maximus
ENSCSAVG00000007328	-	86	57.488	ENSSDUG00000005977	sgf29	71	57.488	Seriola_dumerili
ENSCSAVG00000007328	-	86	57.488	ENSSLDG00000012446	sgf29	71	57.488	Seriola_lalandi_dorsalis
ENSCSAVG00000007328	-	87	56.667	ENSSPUG00000010121	SGF29	72	56.667	Sphenodon_punctatus
ENSCSAVG00000007328	-	86	57.488	ENSSPAG00000018994	sgf29	71	57.488	Stegastes_partitus
ENSCSAVG00000007328	-	87	57.143	ENSSSCG00000022778	SGF29	72	57.143	Sus_scrofa
ENSCSAVG00000007328	-	86	56.522	ENSTNIG00000001984	sgf29	71	56.522	Tetraodon_nigroviridis
ENSCSAVG00000007328	-	82	56.784	ENSTNIG00000006496	SGF29	71	56.784	Tetraodon_nigroviridis
ENSCSAVG00000007328	-	87	57.143	ENSUAMG00000010172	SGF29	63	57.143	Ursus_americanus
ENSCSAVG00000007328	-	76	58.696	ENSUMAG00000010966	SGF29	57	58.696	Ursus_maritimus
ENSCSAVG00000007328	-	87	56.190	ENSXETG00000033185	sgf29	72	56.190	Xenopus_tropicalis
ENSCSAVG00000007328	-	85	58.049	ENSXCOG00000011501	sgf29	70	58.049	Xiphophorus_couchianus
ENSCSAVG00000007328	-	86	57.488	ENSXMAG00000010932	sgf29	71	57.488	Xiphophorus_maculatus