EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007354 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1728 bases
Position: chrreftig_35:1427363-1429090
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012520	MMR_HSR1	PF01926.23	2.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012664	-	1728	-	ENSCSAVP00000012520	576 (aa)	-	H2Z4K8

Gene Model

Click here to download ENSCSAVG00000007354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007354	-	69	32.048	ENSCSAVG00000002514	-	79	32.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007354	-	90	49.816	ENSG00000204590	GNL1	93	50.266	Homo_sapiens
ENSCSAVG00000007354	-	92	45.324	ENSAPOG00000006315	gnl1	90	45.324	Acanthochromis_polyacanthus
ENSCSAVG00000007354	-	90	49.816	ENSAMEG00000013421	GNL1	93	50.266	Ailuropoda_melanoleuca
ENSCSAVG00000007354	-	92	45.293	ENSACIG00000013539	gnl1	90	45.293	Amphilophus_citrinellus
ENSCSAVG00000007354	-	92	45.683	ENSAOCG00000008320	gnl1	90	45.683	Amphiprion_ocellaris
ENSCSAVG00000007354	-	92	45.683	ENSAPEG00000011154	gnl1	90	45.683	Amphiprion_percula
ENSCSAVG00000007354	-	90	46.237	ENSATEG00000020647	gnl1	88	46.237	Anabas_testudineus
ENSCSAVG00000007354	-	92	49.731	ENSACAG00000010395	GNL1	92	49.398	Anolis_carolinensis
ENSCSAVG00000007354	-	90	49.451	ENSANAG00000028106	GNL1	93	49.912	Aotus_nancymaae
ENSCSAVG00000007354	-	92	46.085	ENSACLG00000025394	gnl1	90	46.085	Astatotilapia_calliptera
ENSCSAVG00000007354	-	92	46.266	ENSAMXG00000016080	gnl1	95	45.487	Astyanax_mexicanus
ENSCSAVG00000007354	-	90	50.000	ENSBTAG00000025516	GNL1	93	50.444	Bos_taurus
ENSCSAVG00000007354	-	90	49.817	ENSCJAG00000019996	GNL1	93	50.265	Callithrix_jacchus
ENSCSAVG00000007354	-	90	49.449	ENSCAFG00000000396	GNL1	93	49.911	Canis_familiaris
ENSCSAVG00000007354	-	90	49.449	ENSCAFG00020017556	GNL1	93	49.911	Canis_lupus_dingo
ENSCSAVG00000007354	-	90	50.000	ENSCHIG00000019763	GNL1	93	50.444	Capra_hircus
ENSCSAVG00000007354	-	90	49.816	ENSTSYG00000000164	GNL1	93	50.266	Carlito_syrichta
ENSCSAVG00000007354	-	81	52.452	ENSCAPG00000006662	GNL1	86	52.452	Cavia_aperea
ENSCSAVG00000007354	-	90	48.901	ENSCPOG00000001944	GNL1	89	50.366	Cavia_porcellus
ENSCSAVG00000007354	-	90	49.816	ENSCCAG00000037467	GNL1	93	50.266	Cebus_capucinus
ENSCSAVG00000007354	-	90	49.816	ENSCATG00000045232	GNL1	93	50.088	Cercocebus_atys
ENSCSAVG00000007354	-	84	50.201	ENSCLAG00000012557	GNL1	95	46.595	Chinchilla_lanigera
ENSCSAVG00000007354	-	90	49.816	ENSCSAG00000008202	GNL1	93	50.000	Chlorocebus_sabaeus
ENSCSAVG00000007354	-	60	51.220	ENSCHOG00000010907	GNL1	57	51.220	Choloepus_hoffmanni
ENSCSAVG00000007354	-	95	48.866	ENSCPBG00000018821	GNL1	91	53.409	Chrysemys_picta_bellii
ENSCSAVG00000007354	-	90	70.654	ENSCING00000014499	-	100	70.654	Ciona_intestinalis
ENSCSAVG00000007354	-	90	49.816	ENSCANG00000012933	GNL1	93	50.000	Colobus_angolensis_palliatus
ENSCSAVG00000007354	-	90	49.265	ENSCGRG00001004986	Gnl1	89	50.735	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007354	-	84	51.313	ENSCGRG00000014309	Gnl1	87	50.392	Cricetulus_griseus_crigri
ENSCSAVG00000007354	-	90	41.423	ENSCSEG00000019714	gnl1	96	39.767	Cynoglossus_semilaevis
ENSCSAVG00000007354	-	92	46.441	ENSCVAG00000022650	gnl1	90	46.359	Cyprinodon_variegatus
ENSCSAVG00000007354	-	90	45.985	ENSDARG00000061789	gnl1	89	45.985	Danio_rerio
ENSCSAVG00000007354	-	88	45.506	ENSDNOG00000041571	GNL1	87	46.255	Dasypus_novemcinctus
ENSCSAVG00000007354	-	89	39.388	FBgn0032882	Ns4	87	38.432	Drosophila_melanogaster
ENSCSAVG00000007354	-	54	46.326	ENSEBUG00000009531	-	87	46.273	Eptatretus_burgeri
ENSCSAVG00000007354	-	90	50.000	ENSEASG00005018610	GNL1	93	50.444	Equus_asinus_asinus
ENSCSAVG00000007354	-	90	50.000	ENSECAG00000023081	GNL1	93	50.444	Equus_caballus
ENSCSAVG00000007354	-	91	46.667	ENSELUG00000006281	gnl1	90	46.277	Esox_lucius
ENSCSAVG00000007354	-	90	49.816	ENSFCAG00000007676	GNL1	93	50.266	Felis_catus
ENSCSAVG00000007354	-	80	51.940	ENSFDAG00000000584	GNL1	88	51.940	Fukomys_damarensis
ENSCSAVG00000007354	-	92	45.730	ENSFHEG00000011353	gnl1	90	45.648	Fundulus_heteroclitus
ENSCSAVG00000007354	-	90	45.455	ENSGMOG00000015224	gnl1	95	44.123	Gadus_morhua
ENSCSAVG00000007354	-	90	46.209	ENSGAFG00000014611	gnl1	89	45.760	Gambusia_affinis
ENSCSAVG00000007354	-	92	45.026	ENSGACG00000009765	gnl1	95	44.147	Gasterosteus_aculeatus
ENSCSAVG00000007354	-	90	49.816	ENSGGOG00000014590	GNL1	93	50.266	Gorilla_gorilla
ENSCSAVG00000007354	-	92	46.085	ENSHBUG00000016745	gnl1	90	46.085	Haplochromis_burtoni
ENSCSAVG00000007354	-	90	48.452	ENSHGLG00000017193	GNL1	89	49.909	Heterocephalus_glaber_female
ENSCSAVG00000007354	-	80	50.959	ENSHGLG00100009994	GNL1	92	49.795	Heterocephalus_glaber_male
ENSCSAVG00000007354	-	90	45.588	ENSHCOG00000012493	gnl1	90	45.144	Hippocampus_comes
ENSCSAVG00000007354	-	90	45.421	ENSIPUG00000004850	gnl1	94	44.522	Ictalurus_punctatus
ENSCSAVG00000007354	-	90	49.817	ENSSTOG00000011822	GNL1	93	50.265	Ictidomys_tridecemlineatus
ENSCSAVG00000007354	-	92	49.457	ENSJJAG00000010831	-	91	50.631	Jaculus_jaculus
ENSCSAVG00000007354	-	90	46.029	ENSKMAG00000009059	gnl1	90	45.406	Kryptolebias_marmoratus
ENSCSAVG00000007354	-	90	44.853	ENSLBEG00000011038	gnl1	90	44.604	Labrus_bergylta
ENSCSAVG00000007354	-	91	53.333	ENSLACG00000001713	GNL1	94	52.218	Latimeria_chalumnae
ENSCSAVG00000007354	-	96	48.299	ENSLAFG00000030406	GNL1	98	47.906	Loxodonta_africana
ENSCSAVG00000007354	-	90	49.816	ENSMFAG00000001167	GNL1	93	50.088	Macaca_fascicularis
ENSCSAVG00000007354	-	90	49.816	ENSMMUG00000020077	GNL1	93	50.088	Macaca_mulatta
ENSCSAVG00000007354	-	90	49.816	ENSMNEG00000031618	GNL1	93	50.088	Macaca_nemestrina
ENSCSAVG00000007354	-	90	49.816	ENSMLEG00000030252	GNL1	93	50.088	Mandrillus_leucophaeus
ENSCSAVG00000007354	-	92	46.726	ENSMAMG00000003554	gnl1	90	46.726	Mastacembelus_armatus
ENSCSAVG00000007354	-	92	46.085	ENSMZEG00005018216	gnl1	90	46.085	Maylandia_zebra
ENSCSAVG00000007354	-	90	47.928	ENSMAUG00000015596	Gnl1	93	48.677	Mesocricetus_auratus
ENSCSAVG00000007354	-	91	49.541	ENSMICG00000014708	GNL1	93	50.444	Microcebus_murinus
ENSCSAVG00000007354	-	90	49.449	ENSMOCG00000020934	Gnl1	97	48.247	Microtus_ochrogaster
ENSCSAVG00000007354	-	92	46.181	ENSMMOG00000015833	gnl1	90	46.181	Mola_mola
ENSCSAVG00000007354	-	90	49.267	ENSMODG00000015964	GNL1	89	49.298	Monodelphis_domestica
ENSCSAVG00000007354	-	90	45.750	ENSMALG00000022523	gnl1	92	45.122	Monopterus_albus
ENSCSAVG00000007354	-	90	48.812	MGP_CAROLIEiJ_G0021547	Gnl1	93	49.383	Mus_caroli
ENSCSAVG00000007354	-	90	48.629	ENSMUSG00000024429	Gnl1	93	49.206	Mus_musculus
ENSCSAVG00000007354	-	90	48.812	MGP_PahariEiJ_G0020539	Gnl1	93	49.383	Mus_pahari
ENSCSAVG00000007354	-	92	48.108	MGP_SPRETEiJ_G0022452	Gnl1	91	49.374	Mus_spretus
ENSCSAVG00000007354	-	84	51.717	ENSMPUG00000011828	GNL1	70	50.096	Mustela_putorius_furo
ENSCSAVG00000007354	-	81	53.277	ENSMLUG00000008722	GNL1	88	49.071	Myotis_lucifugus
ENSCSAVG00000007354	-	90	49.449	ENSNGAG00000000745	Gnl1	90	50.919	Nannospalax_galili
ENSCSAVG00000007354	-	92	46.085	ENSNBRG00000020813	gnl1	90	46.085	Neolamprologus_brichardi
ENSCSAVG00000007354	-	90	46.520	ENSNLEG00000005058	GNL1	81	47.080	Nomascus_leucogenys
ENSCSAVG00000007354	-	80	52.802	ENSOPRG00000000007	GNL1	92	51.553	Ochotona_princeps
ENSCSAVG00000007354	-	90	49.621	ENSODEG00000018111	GNL1	89	49.369	Octodon_degus
ENSCSAVG00000007354	-	92	45.730	ENSONIG00000013044	gnl1	90	45.730	Oreochromis_niloticus
ENSCSAVG00000007354	-	90	49.724	ENSOCUG00000002110	GNL1	93	49.110	Oryctolagus_cuniculus
ENSCSAVG00000007354	-	90	45.471	ENSORLG00000012862	gnl1	90	44.858	Oryzias_latipes
ENSCSAVG00000007354	-	90	45.833	ENSORLG00020003923	gnl1	90	45.213	Oryzias_latipes_hni
ENSCSAVG00000007354	-	90	45.471	ENSORLG00015009552	gnl1	90	44.858	Oryzias_latipes_hsok
ENSCSAVG00000007354	-	92	45.633	ENSOMEG00000014409	gnl1	96	43.886	Oryzias_melastigma
ENSCSAVG00000007354	-	90	50.184	ENSOGAG00000004428	-	93	50.622	Otolemur_garnettii
ENSCSAVG00000007354	-	97	45.868	ENSOGAG00000024106	-	96	49.040	Otolemur_garnettii
ENSCSAVG00000007354	-	90	48.556	ENSOARG00000012966	GNL1	93	49.389	Ovis_aries
ENSCSAVG00000007354	-	90	49.816	ENSPPAG00000044009	GNL1	93	50.266	Pan_paniscus
ENSCSAVG00000007354	-	90	49.816	ENSPPRG00000007039	GNL1	93	50.266	Panthera_pardus
ENSCSAVG00000007354	-	90	49.816	ENSPTIG00000011307	GNL1	93	50.089	Panthera_tigris_altaica
ENSCSAVG00000007354	-	90	49.816	ENSPTRG00000017928	GNL1	93	50.088	Pan_troglodytes
ENSCSAVG00000007354	-	90	49.816	ENSPANG00000020097	GNL1	93	50.088	Papio_anubis
ENSCSAVG00000007354	-	92	46.797	ENSPKIG00000002200	gnl1	93	46.021	Paramormyrops_kingsleyae
ENSCSAVG00000007354	-	81	43.182	ENSPSIG00000008441	GNL1	85	42.545	Pelodiscus_sinensis
ENSCSAVG00000007354	-	90	44.669	ENSPMGG00000007259	gnl1	97	43.508	Periophthalmus_magnuspinnatus
ENSCSAVG00000007354	-	84	52.121	ENSPEMG00000002731	Gnl1	94	48.155	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007354	-	90	49.171	ENSPCIG00000014975	GNL1	93	49.383	Phascolarctos_cinereus
ENSCSAVG00000007354	-	92	45.989	ENSPFOG00000015398	gnl1	90	45.907	Poecilia_formosa
ENSCSAVG00000007354	-	92	46.168	ENSPLAG00000003231	gnl1	89	46.085	Poecilia_latipinna
ENSCSAVG00000007354	-	92	45.989	ENSPMEG00000005001	gnl1	90	45.907	Poecilia_mexicana
ENSCSAVG00000007354	-	92	46.168	ENSPREG00000012818	gnl1	90	46.085	Poecilia_reticulata
ENSCSAVG00000007354	-	90	49.816	ENSPPYG00000016408	GNL1	93	50.266	Pongo_abelii
ENSCSAVG00000007354	-	53	66.142	ENSPCAG00000004522	-	68	66.142	Procavia_capensis
ENSCSAVG00000007354	-	90	50.368	ENSPCOG00000015669	GNL1	93	50.799	Propithecus_coquereli
ENSCSAVG00000007354	-	90	50.091	ENSPVAG00000003970	GNL1	93	50.263	Pteropus_vampyrus
ENSCSAVG00000007354	-	92	46.085	ENSPNYG00000022614	gnl1	90	46.085	Pundamilia_nyererei
ENSCSAVG00000007354	-	90	47.310	ENSPNAG00000021257	gnl1	89	47.310	Pygocentrus_nattereri
ENSCSAVG00000007354	-	90	48.897	ENSRNOG00000000798	Gnl1	98	47.993	Rattus_norvegicus
ENSCSAVG00000007354	-	90	49.816	ENSRBIG00000019143	GNL1	93	50.088	Rhinopithecus_bieti
ENSCSAVG00000007354	-	90	49.816	ENSRROG00000030029	GNL1	93	50.088	Rhinopithecus_roxellana
ENSCSAVG00000007354	-	90	49.816	ENSSBOG00000031909	GNL1	93	50.266	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007354	-	96	47.323	ENSSHAG00000007557	GNL1	98	47.245	Sarcophilus_harrisii
ENSCSAVG00000007354	-	90	48.141	ENSSFOG00015013921	gnl1	92	46.809	Scleropages_formosus
ENSCSAVG00000007354	-	90	44.727	ENSSMAG00000010147	gnl1	94	42.689	Scophthalmus_maximus
ENSCSAVG00000007354	-	92	45.422	ENSSDUG00000013824	gnl1	90	45.422	Seriola_dumerili
ENSCSAVG00000007354	-	92	45.161	ENSSLDG00000024560	gnl1	90	45.161	Seriola_lalandi_dorsalis
ENSCSAVG00000007354	-	91	49.909	ENSSPUG00000015374	GNL1	96	48.760	Sphenodon_punctatus
ENSCSAVG00000007354	-	90	45.688	ENSSPAG00000017541	gnl1	90	45.242	Stegastes_partitus
ENSCSAVG00000007354	-	90	50.000	ENSSSCG00000001372	GNL1	97	51.595	Sus_scrofa
ENSCSAVG00000007354	-	90	45.404	ENSTRUG00000011226	gnl1	85	45.404	Takifugu_rubripes
ENSCSAVG00000007354	-	90	44.324	ENSTNIG00000008017	gnl1	91	44.324	Tetraodon_nigroviridis
ENSCSAVG00000007354	-	90	46.679	ENSTBEG00000007538	GNL1	92	45.989	Tupaia_belangeri
ENSCSAVG00000007354	-	90	50.551	ENSTTRG00000008287	GNL1	94	49.298	Tursiops_truncatus
ENSCSAVG00000007354	-	90	50.000	ENSUAMG00000007671	GNL1	93	50.444	Ursus_americanus
ENSCSAVG00000007354	-	90	46.154	ENSUMAG00000018935	GNL1	92	46.726	Ursus_maritimus
ENSCSAVG00000007354	-	90	49.449	ENSVVUG00000009537	GNL1	93	49.911	Vulpes_vulpes
ENSCSAVG00000007354	-	91	52.364	ENSXETG00000024087	gnl1	95	51.053	Xenopus_tropicalis
ENSCSAVG00000007354	-	91	46.209	ENSXCOG00000019185	gnl1	90	45.922	Xiphophorus_couchianus
ENSCSAVG00000007354	-	91	46.029	ENSXMAG00000011015	gnl1	90	45.745	Xiphophorus_maculatus