EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007467 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4035 bases
Position: chrreftig_67:1143665-1147699
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012724	Nup35_RRM	PF05172.13	3e-24	1	1
ENSCSAVP00000012724	Nup35_RRM_2	PF14605.6	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012872	-	1417	-	ENSCSAVP00000012724	334 (aa)	-	H2Z562

Gene Model

Click here to download ENSCSAVG00000007467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007467	-	99	43.478	ENSG00000163002	NUP35	99	43.109	Homo_sapiens
ENSCSAVG00000007467	-	99	38.889	ENSAPOG00000003630	nup35	98	40.233	Acanthochromis_polyacanthus
ENSCSAVG00000007467	-	99	44.348	ENSAMEG00000001191	NUP35	95	44.348	Ailuropoda_melanoleuca
ENSCSAVG00000007467	-	73	43.265	ENSACIG00000023984	nup35	92	44.309	Amphilophus_citrinellus
ENSCSAVG00000007467	-	99	39.181	ENSAOCG00000007484	nup35	98	39.826	Amphiprion_ocellaris
ENSCSAVG00000007467	-	99	39.181	ENSAPEG00000020027	nup35	98	40.525	Amphiprion_percula
ENSCSAVG00000007467	-	99	41.742	ENSATEG00000019305	nup35	98	42.814	Anabas_testudineus
ENSCSAVG00000007467	-	99	45.455	ENSAPLG00000009161	NUP35	95	45.455	Anas_platyrhynchos
ENSCSAVG00000007467	-	99	43.860	ENSACAG00000008692	NUP35	95	43.860	Anolis_carolinensis
ENSCSAVG00000007467	-	99	43.353	ENSANAG00000021090	NUP35	96	43.353	Aotus_nancymaae
ENSCSAVG00000007467	-	99	40.361	ENSACLG00000013918	nup35	98	39.080	Astatotilapia_calliptera
ENSCSAVG00000007467	-	99	43.027	ENSAMXG00000003371	nup35	99	42.687	Astyanax_mexicanus
ENSCSAVG00000007467	-	99	43.732	ENSBTAG00000009777	NUP35	95	43.732	Bos_taurus
ENSCSAVG00000007467	-	99	43.478	ENSCJAG00000011104	NUP35	96	43.478	Callithrix_jacchus
ENSCSAVG00000007467	-	98	43.567	ENSCAFG00000031849	NUP35	99	43.567	Canis_familiaris
ENSCSAVG00000007467	-	99	44.058	ENSCAFG00020008408	NUP35	95	44.058	Canis_lupus_dingo
ENSCSAVG00000007467	-	98	44.048	ENSCHIG00000023148	NUP35	99	44.048	Capra_hircus
ENSCSAVG00000007467	-	99	43.529	ENSTSYG00000002117	NUP35	95	43.529	Carlito_syrichta
ENSCSAVG00000007467	-	99	36.152	ENSCAPG00000005703	NUP35	97	37.391	Cavia_aperea
ENSCSAVG00000007467	-	99	43.402	ENSCPOG00000011906	NUP35	97	44.477	Cavia_porcellus
ENSCSAVG00000007467	-	99	43.478	ENSCCAG00000025009	NUP35	90	54.348	Cebus_capucinus
ENSCSAVG00000007467	-	99	36.471	ENSCATG00000033109	NUP35	95	36.471	Cercocebus_atys
ENSCSAVG00000007467	-	99	42.566	ENSCLAG00000012559	NUP35	95	43.353	Chinchilla_lanigera
ENSCSAVG00000007467	-	99	43.478	ENSCSAG00000012620	NUP35	96	43.478	Chlorocebus_sabaeus
ENSCSAVG00000007467	-	99	43.804	ENSCPBG00000001303	NUP35	96	43.804	Chrysemys_picta_bellii
ENSCSAVG00000007467	-	99	73.030	ENSCING00000009659	-	97	73.030	Ciona_intestinalis
ENSCSAVG00000007467	-	99	43.478	ENSCANG00000030785	NUP35	90	54.348	Colobus_angolensis_palliatus
ENSCSAVG00000007467	-	99	43.605	ENSCGRG00001018638	-	96	43.605	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007467	-	99	43.605	ENSCGRG00000011313	-	96	43.605	Cricetulus_griseus_crigri
ENSCSAVG00000007467	-	99	39.941	ENSCSEG00000000938	nup35	97	39.941	Cynoglossus_semilaevis
ENSCSAVG00000007467	-	99	39.193	ENSCVAG00000001792	nup35	98	39.193	Cyprinodon_variegatus
ENSCSAVG00000007467	-	99	42.012	ENSDARG00000012222	nup35	99	41.667	Danio_rerio
ENSCSAVG00000007467	-	99	44.220	ENSDNOG00000038754	-	95	44.220	Dasypus_novemcinctus
ENSCSAVG00000007467	-	99	44.509	ENSDNOG00000009513	-	84	44.509	Dasypus_novemcinctus
ENSCSAVG00000007467	-	99	43.188	ENSDORG00000010458	-	97	42.939	Dipodomys_ordii
ENSCSAVG00000007467	-	99	31.728	FBgn0030943	CG6540	99	31.728	Drosophila_melanogaster
ENSCSAVG00000007467	-	99	44.606	ENSETEG00000005896	NUP35	99	44.606	Echinops_telfairi
ENSCSAVG00000007467	-	99	37.143	ENSEBUG00000013034	nup35	99	37.143	Eptatretus_burgeri
ENSCSAVG00000007467	-	99	43.732	ENSEASG00005022100	NUP35	95	43.732	Equus_asinus_asinus
ENSCSAVG00000007467	-	99	43.732	ENSECAG00000003968	NUP35	99	43.235	Equus_caballus
ENSCSAVG00000007467	-	99	39.535	ENSEEUG00000008469	NUP35	96	39.535	Erinaceus_europaeus
ENSCSAVG00000007467	-	100	41.399	ENSELUG00000013693	nup35	99	41.543	Esox_lucius
ENSCSAVG00000007467	-	99	43.266	ENSFCAG00000025636	NUP35	99	43.149	Felis_catus
ENSCSAVG00000007467	-	99	43.023	ENSFALG00000013175	NUP35	96	43.235	Ficedula_albicollis
ENSCSAVG00000007467	-	99	43.860	ENSFDAG00000017998	NUP35	95	43.860	Fukomys_damarensis
ENSCSAVG00000007467	-	99	41.593	ENSFHEG00000010229	nup35	98	41.593	Fundulus_heteroclitus
ENSCSAVG00000007467	-	53	53.371	ENSGMOG00000003337	nup35	74	53.371	Gadus_morhua
ENSCSAVG00000007467	-	99	43.023	ENSGALG00000002689	NUP35	96	43.023	Gallus_gallus
ENSCSAVG00000007467	-	99	41.420	ENSGAFG00000022048	nup35	98	41.420	Gambusia_affinis
ENSCSAVG00000007467	-	99	41.317	ENSGACG00000008203	nup35	98	41.493	Gasterosteus_aculeatus
ENSCSAVG00000007467	-	98	43.605	ENSGAGG00000001967	NUP35	99	43.605	Gopherus_agassizii
ENSCSAVG00000007467	-	99	43.478	ENSGGOG00000009919	NUP35	87	54.348	Gorilla_gorilla
ENSCSAVG00000007467	-	99	33.430	ENSHGLG00000000414	-	96	33.430	Heterocephalus_glaber_female
ENSCSAVG00000007467	-	93	39.506	ENSHGLG00000008616	-	89	40.312	Heterocephalus_glaber_female
ENSCSAVG00000007467	-	99	43.275	ENSHGLG00000013230	NUP35	95	43.275	Heterocephalus_glaber_female
ENSCSAVG00000007467	-	94	39.264	ENSHGLG00100000091	-	90	40.062	Heterocephalus_glaber_male
ENSCSAVG00000007467	-	99	43.275	ENSHGLG00100012840	NUP35	95	43.275	Heterocephalus_glaber_male
ENSCSAVG00000007467	-	99	33.430	ENSHGLG00100010869	-	96	33.430	Heterocephalus_glaber_male
ENSCSAVG00000007467	-	99	41.018	ENSHCOG00000003882	nup35	98	41.018	Hippocampus_comes
ENSCSAVG00000007467	-	100	41.471	ENSIPUG00000002798	nup35	99	41.471	Ictalurus_punctatus
ENSCSAVG00000007467	-	99	44.477	ENSSTOG00000000711	NUP35	95	44.477	Ictidomys_tridecemlineatus
ENSCSAVG00000007467	-	99	41.317	ENSJJAG00000007003	-	93	41.317	Jaculus_jaculus
ENSCSAVG00000007467	-	85	41.356	ENSJJAG00000006387	-	90	41.356	Jaculus_jaculus
ENSCSAVG00000007467	-	99	39.710	ENSJJAG00000017434	-	95	39.710	Jaculus_jaculus
ENSCSAVG00000007467	-	99	44.220	ENSJJAG00000016432	-	97	44.092	Jaculus_jaculus
ENSCSAVG00000007467	-	99	41.018	ENSKMAG00000011162	nup35	98	40.774	Kryptolebias_marmoratus
ENSCSAVG00000007467	-	99	34.718	ENSLBEG00000012416	nup35	98	34.718	Labrus_bergylta
ENSCSAVG00000007467	-	98	42.982	ENSLACG00000008247	NUP35	99	42.982	Latimeria_chalumnae
ENSCSAVG00000007467	-	100	40.290	ENSLOCG00000006726	nup35	99	40.580	Lepisosteus_oculatus
ENSCSAVG00000007467	-	99	42.775	ENSLAFG00000008155	NUP35	95	42.775	Loxodonta_africana
ENSCSAVG00000007467	-	99	43.478	ENSMFAG00000000834	NUP35	99	43.109	Macaca_fascicularis
ENSCSAVG00000007467	-	99	43.478	ENSMMUG00000004140	NUP35	99	43.478	Macaca_mulatta
ENSCSAVG00000007467	-	99	43.478	ENSMNEG00000029014	NUP35	96	43.478	Macaca_nemestrina
ENSCSAVG00000007467	-	99	43.478	ENSMLEG00000035422	NUP35	90	54.348	Mandrillus_leucophaeus
ENSCSAVG00000007467	-	99	38.973	ENSMAMG00000013232	nup35	98	38.596	Mastacembelus_armatus
ENSCSAVG00000007467	-	99	39.474	ENSMZEG00005020619	nup35	96	38.462	Maylandia_zebra
ENSCSAVG00000007467	-	98	43.235	ENSMGAG00000004412	NUP35	94	43.235	Meleagris_gallopavo
ENSCSAVG00000007467	-	99	44.023	ENSMAUG00000013776	-	95	44.023	Mesocricetus_auratus
ENSCSAVG00000007467	-	99	43.732	ENSMICG00000006790	NUP35	99	43.235	Microcebus_murinus
ENSCSAVG00000007467	-	99	44.606	ENSMOCG00000014754	-	95	44.606	Microtus_ochrogaster
ENSCSAVG00000007467	-	99	41.692	ENSMMOG00000005026	nup35	97	41.692	Mola_mola
ENSCSAVG00000007467	-	99	44.348	ENSMODG00000010578	NUP35	96	44.348	Monodelphis_domestica
ENSCSAVG00000007467	-	99	40.000	ENSMALG00000020187	nup35	98	40.000	Monopterus_albus
ENSCSAVG00000007467	-	99	44.023	MGP_CAROLIEiJ_G0023709	-	95	44.023	Mus_caroli
ENSCSAVG00000007467	-	99	44.380	ENSMUSG00000026999	Nup35	95	44.380	Mus_musculus
ENSCSAVG00000007467	-	99	44.315	MGP_PahariEiJ_G0025160	-	95	44.315	Mus_pahari
ENSCSAVG00000007467	-	73	42.456	MGP_SPRETEiJ_G0033063	-	93	42.308	Mus_spretus
ENSCSAVG00000007467	-	99	43.678	ENSMPUG00000002063	NUP35	95	44.058	Mustela_putorius_furo
ENSCSAVG00000007467	-	99	44.023	ENSMLUG00000013154	NUP35	95	44.023	Myotis_lucifugus
ENSCSAVG00000007467	-	99	44.606	ENSNGAG00000012107	-	95	44.606	Nannospalax_galili
ENSCSAVG00000007467	-	99	39.528	ENSNBRG00000020466	nup35	96	40.469	Neolamprologus_brichardi
ENSCSAVG00000007467	-	99	43.478	ENSNLEG00000035026	NUP35	89	54.348	Nomascus_leucogenys
ENSCSAVG00000007467	-	57	39.378	ENSMEUG00000003001	-	57	39.378	Notamacropus_eugenii
ENSCSAVG00000007467	-	73	46.800	ENSOPRG00000016609	NUP35	75	46.800	Ochotona_princeps
ENSCSAVG00000007467	-	99	43.860	ENSODEG00000011202	-	95	43.860	Octodon_degus
ENSCSAVG00000007467	-	72	36.800	ENSODEG00000000280	-	77	36.800	Octodon_degus
ENSCSAVG00000007467	-	99	40.774	ENSONIG00000016251	nup35	98	39.714	Oreochromis_niloticus
ENSCSAVG00000007467	-	75	43.295	ENSOANG00000006793	-	96	43.295	Ornithorhynchus_anatinus
ENSCSAVG00000007467	-	99	44.444	ENSOCUG00000014407	NUP35	95	44.444	Oryctolagus_cuniculus
ENSCSAVG00000007467	-	99	39.130	ENSORLG00000013588	nup35	99	39.003	Oryzias_latipes
ENSCSAVG00000007467	-	99	39.130	ENSORLG00020008201	nup35	98	39.130	Oryzias_latipes_hni
ENSCSAVG00000007467	-	99	39.942	ENSORLG00015011096	nup35	99	39.823	Oryzias_latipes_hsok
ENSCSAVG00000007467	-	99	38.997	ENSOMEG00000007628	nup35	98	38.997	Oryzias_melastigma
ENSCSAVG00000007467	-	99	43.732	ENSOGAG00000011920	NUP35	95	43.732	Otolemur_garnettii
ENSCSAVG00000007467	-	99	44.798	ENSOARG00000016728	NUP35	95	44.798	Ovis_aries
ENSCSAVG00000007467	-	99	43.478	ENSPPAG00000036316	NUP35	99	43.109	Pan_paniscus
ENSCSAVG00000007467	-	99	43.266	ENSPPRG00000024726	NUP35	99	43.149	Panthera_pardus
ENSCSAVG00000007467	-	99	43.266	ENSPTIG00000017299	NUP35	95	43.642	Panthera_tigris_altaica
ENSCSAVG00000007467	-	99	43.478	ENSPTRG00000012711	NUP35	99	43.109	Pan_troglodytes
ENSCSAVG00000007467	-	99	43.478	ENSPANG00000013686	NUP35	96	43.478	Papio_anubis
ENSCSAVG00000007467	-	100	41.471	ENSPKIG00000022051	nup35	99	42.274	Paramormyrops_kingsleyae
ENSCSAVG00000007467	-	98	43.275	ENSPSIG00000002146	NUP35	99	43.275	Pelodiscus_sinensis
ENSCSAVG00000007467	-	99	39.394	ENSPMGG00000022915	nup35	97	39.339	Periophthalmus_magnuspinnatus
ENSCSAVG00000007467	-	99	44.023	ENSPEMG00000014718	-	95	44.023	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007467	-	99	40.233	ENSPMAG00000006604	nup35	97	40.233	Petromyzon_marinus
ENSCSAVG00000007467	-	99	43.314	ENSPCIG00000015482	NUP35	96	43.314	Phascolarctos_cinereus
ENSCSAVG00000007467	-	99	41.124	ENSPFOG00000010020	nup35	98	41.124	Poecilia_formosa
ENSCSAVG00000007467	-	99	40.828	ENSPLAG00000005867	nup35	98	40.828	Poecilia_latipinna
ENSCSAVG00000007467	-	99	41.265	ENSPMEG00000010552	nup35	98	41.265	Poecilia_mexicana
ENSCSAVG00000007467	-	99	40.663	ENSPREG00000021005	nup35	98	40.663	Poecilia_reticulata
ENSCSAVG00000007467	-	99	43.478	ENSPPYG00000012998	-	76	43.478	Pongo_abelii
ENSCSAVG00000007467	-	100	43.931	ENSPCOG00000024097	NUP35	96	43.931	Propithecus_coquereli
ENSCSAVG00000007467	-	99	44.380	ENSPVAG00000015908	NUP35	95	44.380	Pteropus_vampyrus
ENSCSAVG00000007467	-	99	39.883	ENSPNYG00000012486	nup35	94	39.883	Pundamilia_nyererei
ENSCSAVG00000007467	-	99	43.860	ENSPNAG00000005181	nup35	97	43.860	Pygocentrus_nattereri
ENSCSAVG00000007467	-	99	44.767	ENSRNOG00000009290	Nup35	95	44.767	Rattus_norvegicus
ENSCSAVG00000007467	-	99	43.478	ENSRBIG00000039427	NUP35	90	54.348	Rhinopithecus_bieti
ENSCSAVG00000007467	-	99	43.478	ENSRROG00000026525	NUP35	90	54.348	Rhinopithecus_roxellana
ENSCSAVG00000007467	-	99	43.478	ENSSBOG00000018676	NUP35	90	54.348	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007467	-	99	43.402	ENSSHAG00000009746	NUP35	95	43.402	Sarcophilus_harrisii
ENSCSAVG00000007467	-	99	43.023	ENSSFOG00015002390	nup35	98	43.023	Scleropages_formosus
ENSCSAVG00000007467	-	99	39.535	ENSSMAG00000015651	nup35	98	39.535	Scophthalmus_maximus
ENSCSAVG00000007467	-	99	41.265	ENSSDUG00000013118	nup35	97	41.265	Seriola_dumerili
ENSCSAVG00000007467	-	99	40.483	ENSSLDG00000018249	nup35	97	41.867	Seriola_lalandi_dorsalis
ENSCSAVG00000007467	-	99	34.024	ENSSARG00000001535	-	99	34.024	Sorex_araneus
ENSCSAVG00000007467	-	99	42.816	ENSSPUG00000018651	NUP35	96	42.816	Sphenodon_punctatus
ENSCSAVG00000007467	-	99	39.879	ENSSPAG00000018264	nup35	98	38.372	Stegastes_partitus
ENSCSAVG00000007467	-	99	44.315	ENSSSCG00000028949	NUP35	95	44.315	Sus_scrofa
ENSCSAVG00000007467	-	99	43.895	ENSTGUG00000011278	NUP35	96	43.895	Taeniopygia_guttata
ENSCSAVG00000007467	-	94	39.748	ENSTRUG00000014111	nup35	99	39.748	Takifugu_rubripes
ENSCSAVG00000007467	-	53	48.023	ENSTNIG00000011568	nup35	57	48.023	Tetraodon_nigroviridis
ENSCSAVG00000007467	-	99	41.983	ENSTBEG00000003328	NUP35	95	41.983	Tupaia_belangeri
ENSCSAVG00000007467	-	99	36.873	ENSTTRG00000002512	NUP35	95	36.873	Tursiops_truncatus
ENSCSAVG00000007467	-	57	54.922	ENSUAMG00000018696	-	91	54.922	Ursus_americanus
ENSCSAVG00000007467	-	92	43.692	ENSUMAG00000017104	NUP35	95	44.099	Ursus_maritimus
ENSCSAVG00000007467	-	99	43.440	ENSVPAG00000011898	NUP35	95	43.440	Vicugna_pacos
ENSCSAVG00000007467	-	98	43.567	ENSVVUG00000016832	NUP35	99	43.567	Vulpes_vulpes
ENSCSAVG00000007467	-	99	35.159	ENSXETG00000001335	nup35	97	33.903	Xenopus_tropicalis
ENSCSAVG00000007467	-	99	40.828	ENSXMAG00000000409	nup35	98	40.828	Xiphophorus_maculatus