EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007494 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1266 bases
Position: chrreftig_67:1205755-1207020
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012763	PolyA_pol	PF01743.20	1.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012912	-	1266	-	ENSCSAVP00000012763	422 (aa)	-	H2Z5A1

Gene Model

Click here to download ENSCSAVG00000007494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007494's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007494	-	97	45.652	ENSG00000072756	TRNT1	95	45.652	Homo_sapiens
ENSCSAVG00000007494	-	95	41.687	ENSAPOG00000013687	trnt1	94	41.687	Acanthochromis_polyacanthus
ENSCSAVG00000007494	-	100	44.731	ENSAMEG00000014520	TRNT1	97	44.731	Ailuropoda_melanoleuca
ENSCSAVG00000007494	-	95	39.851	ENSACIG00000021706	trnt1	94	39.851	Amphilophus_citrinellus
ENSCSAVG00000007494	-	95	40.842	ENSAOCG00000024612	trnt1	94	40.842	Amphiprion_ocellaris
ENSCSAVG00000007494	-	96	35.697	ENSAPEG00000022627	trnt1	94	35.697	Amphiprion_percula
ENSCSAVG00000007494	-	95	41.584	ENSATEG00000008928	trnt1	99	41.584	Anabas_testudineus
ENSCSAVG00000007494	-	91	44.935	ENSAPLG00000004258	TRNT1	95	44.935	Anas_platyrhynchos
ENSCSAVG00000007494	-	95	42.963	ENSACAG00000005657	TRNT1	92	42.963	Anolis_carolinensis
ENSCSAVG00000007494	-	100	45.176	ENSANAG00000024802	TRNT1	97	45.176	Aotus_nancymaae
ENSCSAVG00000007494	-	95	40.347	ENSACLG00000022227	trnt1	94	40.347	Astatotilapia_calliptera
ENSCSAVG00000007494	-	95	42.184	ENSAMXG00000003960	trnt1	94	41.872	Astyanax_mexicanus
ENSCSAVG00000007494	-	100	44.471	ENSBTAG00000019534	TRNT1	97	44.471	Bos_taurus
ENSCSAVG00000007494	-	95	39.173	WBGene00010089	hpo-31	94	39.173	Caenorhabditis_elegans
ENSCSAVG00000007494	-	100	44.706	ENSCJAG00000015466	TRNT1	97	44.706	Callithrix_jacchus
ENSCSAVG00000007494	-	98	45.542	ENSCAFG00000005985	TRNT1	95	45.542	Canis_familiaris
ENSCSAVG00000007494	-	98	45.542	ENSCAFG00020014746	TRNT1	95	45.542	Canis_lupus_dingo
ENSCSAVG00000007494	-	99	44.340	ENSCHIG00000007030	TRNT1	97	44.340	Capra_hircus
ENSCSAVG00000007494	-	99	44.575	ENSTSYG00000013390	TRNT1	97	44.575	Carlito_syrichta
ENSCSAVG00000007494	-	89	37.008	ENSCAPG00000006891	TRNT1	100	37.008	Cavia_aperea
ENSCSAVG00000007494	-	99	44.575	ENSCPOG00000007849	TRNT1	92	55.285	Cavia_porcellus
ENSCSAVG00000007494	-	96	45.012	ENSCCAG00000002919	TRNT1	99	45.274	Cebus_capucinus
ENSCSAVG00000007494	-	99	44.917	ENSCATG00000031985	TRNT1	96	44.917	Cercocebus_atys
ENSCSAVG00000007494	-	99	45.283	ENSCLAG00000005186	TRNT1	90	59.896	Chinchilla_lanigera
ENSCSAVG00000007494	-	99	45.047	ENSCSAG00000011052	TRNT1	97	45.047	Chlorocebus_sabaeus
ENSCSAVG00000007494	-	84	58.639	ENSCHOG00000005712	TRNT1	82	58.639	Choloepus_hoffmanni
ENSCSAVG00000007494	-	96	45.122	ENSCPBG00000017636	TRNT1	93	45.122	Chrysemys_picta_bellii
ENSCSAVG00000007494	-	95	70.471	ENSCING00000007069	-	99	70.471	Ciona_intestinalis
ENSCSAVG00000007494	-	99	44.811	ENSCANG00000039030	TRNT1	97	44.811	Colobus_angolensis_palliatus
ENSCSAVG00000007494	-	99	44.340	ENSCGRG00001009998	Trnt1	97	44.340	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007494	-	99	44.340	ENSCGRG00000013410	Trnt1	93	57.360	Cricetulus_griseus_crigri
ENSCSAVG00000007494	-	95	42.079	ENSCSEG00000008157	trnt1	94	42.338	Cynoglossus_semilaevis
ENSCSAVG00000007494	-	95	40.842	ENSCVAG00000019770	trnt1	95	40.842	Cyprinodon_variegatus
ENSCSAVG00000007494	-	95	42.998	ENSDARG00000075297	trnt1	94	42.998	Danio_rerio
ENSCSAVG00000007494	-	100	45.412	ENSDNOG00000008837	TRNT1	97	45.412	Dasypus_novemcinctus
ENSCSAVG00000007494	-	99	44.656	ENSDORG00000014035	Trnt1	97	44.656	Dipodomys_ordii
ENSCSAVG00000007494	-	98	41.766	FBgn0037369	CG2100	86	41.766	Drosophila_melanogaster
ENSCSAVG00000007494	-	58	54.065	ENSETEG00000018177	TRNT1	99	54.065	Echinops_telfairi
ENSCSAVG00000007494	-	95	43.672	ENSEBUG00000012779	-	95	43.672	Eptatretus_burgeri
ENSCSAVG00000007494	-	99	44.575	ENSEASG00005003577	TRNT1	97	44.575	Equus_asinus_asinus
ENSCSAVG00000007494	-	99	44.811	ENSECAG00000014420	TRNT1	97	44.811	Equus_caballus
ENSCSAVG00000007494	-	98	44.578	ENSEEUG00000009567	TRNT1	95	44.578	Erinaceus_europaeus
ENSCSAVG00000007494	-	94	42.500	ENSELUG00000003802	trnt1	93	42.500	Esox_lucius
ENSCSAVG00000007494	-	100	44.235	ENSFCAG00000026805	TRNT1	97	44.235	Felis_catus
ENSCSAVG00000007494	-	91	44.675	ENSFALG00000013539	TRNT1	99	44.675	Ficedula_albicollis
ENSCSAVG00000007494	-	99	44.811	ENSFDAG00000018412	TRNT1	89	58.333	Fukomys_damarensis
ENSCSAVG00000007494	-	95	41.565	ENSFHEG00000019294	trnt1	95	41.565	Fundulus_heteroclitus
ENSCSAVG00000007494	-	95	42.680	ENSGMOG00000007460	trnt1	94	42.680	Gadus_morhua
ENSCSAVG00000007494	-	95	45.050	ENSGALG00000017368	TRNT1	93	45.050	Gallus_gallus
ENSCSAVG00000007494	-	95	41.872	ENSGAFG00000008647	trnt1	95	41.872	Gambusia_affinis
ENSCSAVG00000007494	-	95	40.842	ENSGACG00000011903	trnt1	96	41.667	Gasterosteus_aculeatus
ENSCSAVG00000007494	-	96	45.098	ENSGAGG00000020942	TRNT1	92	45.098	Gopherus_agassizii
ENSCSAVG00000007494	-	97	45.894	ENSGGOG00000015286	TRNT1	95	45.894	Gorilla_gorilla
ENSCSAVG00000007494	-	95	40.347	ENSHBUG00000002797	trnt1	94	40.347	Haplochromis_burtoni
ENSCSAVG00000007494	-	99	44.575	ENSHGLG00000003649	TRNT1	97	44.575	Heterocephalus_glaber_female
ENSCSAVG00000007494	-	98	42.548	ENSHGLG00000000221	-	95	42.548	Heterocephalus_glaber_female
ENSCSAVG00000007494	-	99	44.104	ENSHGLG00100016421	TRNT1	89	56.021	Heterocephalus_glaber_male
ENSCSAVG00000007494	-	95	42.752	ENSHCOG00000010618	trnt1	94	42.752	Hippocampus_comes
ENSCSAVG00000007494	-	95	42.752	ENSIPUG00000000971	trnt1	94	42.752	Ictalurus_punctatus
ENSCSAVG00000007494	-	100	43.396	ENSSTOG00000000150	TRNT1	93	59.375	Ictidomys_tridecemlineatus
ENSCSAVG00000007494	-	99	44.104	ENSJJAG00000018561	Trnt1	97	44.104	Jaculus_jaculus
ENSCSAVG00000007494	-	94	41.687	ENSKMAG00000011307	trnt1	94	41.687	Kryptolebias_marmoratus
ENSCSAVG00000007494	-	91	39.948	ENSLBEG00000019457	trnt1	91	39.948	Labrus_bergylta
ENSCSAVG00000007494	-	95	44.417	ENSLACG00000013227	TRNT1	92	44.417	Latimeria_chalumnae
ENSCSAVG00000007494	-	95	42.040	ENSLOCG00000011105	trnt1	92	42.040	Lepisosteus_oculatus
ENSCSAVG00000007494	-	100	44.941	ENSLAFG00000023191	TRNT1	97	44.941	Loxodonta_africana
ENSCSAVG00000007494	-	99	45.154	ENSMFAG00000045113	TRNT1	96	45.154	Macaca_fascicularis
ENSCSAVG00000007494	-	99	45.154	ENSMMUG00000017983	TRNT1	96	45.154	Macaca_mulatta
ENSCSAVG00000007494	-	99	45.154	ENSMNEG00000037805	TRNT1	96	45.154	Macaca_nemestrina
ENSCSAVG00000007494	-	90	45.833	ENSMLEG00000033671	TRNT1	99	45.833	Mandrillus_leucophaeus
ENSCSAVG00000007494	-	96	40.238	ENSMAMG00000023401	trnt1	98	40.238	Mastacembelus_armatus
ENSCSAVG00000007494	-	95	40.347	ENSMZEG00005009141	trnt1	94	40.347	Maylandia_zebra
ENSCSAVG00000007494	-	76	42.368	ENSMGAG00000009971	TRNT1	99	42.368	Meleagris_gallopavo
ENSCSAVG00000007494	-	99	44.444	ENSMAUG00000020707	Trnt1	97	44.444	Mesocricetus_auratus
ENSCSAVG00000007494	-	99	45.261	ENSMICG00000016615	TRNT1	97	45.261	Microcebus_murinus
ENSCSAVG00000007494	-	99	43.868	ENSMOCG00000004539	Trnt1	97	43.868	Microtus_ochrogaster
ENSCSAVG00000007494	-	95	41.832	ENSMMOG00000010742	trnt1	95	41.832	Mola_mola
ENSCSAVG00000007494	-	99	44.575	ENSMODG00000004368	TRNT1	97	44.575	Monodelphis_domestica
ENSCSAVG00000007494	-	94	41.791	ENSMALG00000008376	trnt1	92	41.791	Monopterus_albus
ENSCSAVG00000007494	-	99	44.575	MGP_CAROLIEiJ_G0028698	Trnt1	89	58.854	Mus_caroli
ENSCSAVG00000007494	-	99	44.575	ENSMUSG00000013736	Trnt1	89	58.854	Mus_musculus
ENSCSAVG00000007494	-	99	44.340	MGP_PahariEiJ_G0022449	Trnt1	95	58.854	Mus_pahari
ENSCSAVG00000007494	-	99	44.575	MGP_SPRETEiJ_G0029726	Trnt1	89	58.854	Mus_spretus
ENSCSAVG00000007494	-	100	45.176	ENSMPUG00000017017	TRNT1	97	45.176	Mustela_putorius_furo
ENSCSAVG00000007494	-	91	45.736	ENSMLUG00000011864	TRNT1	99	45.736	Myotis_lucifugus
ENSCSAVG00000007494	-	99	45.283	ENSNGAG00000000537	Trnt1	88	58.031	Nannospalax_galili
ENSCSAVG00000007494	-	71	46.000	ENSNBRG00000023606	trnt1	86	46.000	Neolamprologus_brichardi
ENSCSAVG00000007494	-	99	45.047	ENSNLEG00000003226	TRNT1	97	45.047	Nomascus_leucogenys
ENSCSAVG00000007494	-	99	43.868	ENSMEUG00000004684	TRNT1	97	43.868	Notamacropus_eugenii
ENSCSAVG00000007494	-	91	42.597	ENSOPRG00000015067	TRNT1	99	42.597	Ochotona_princeps
ENSCSAVG00000007494	-	97	46.135	ENSODEG00000007597	TRNT1	95	46.135	Octodon_degus
ENSCSAVG00000007494	-	95	40.347	ENSONIG00000020273	trnt1	93	40.347	Oreochromis_niloticus
ENSCSAVG00000007494	-	98	46.265	ENSOANG00000007514	TRNT1	95	46.265	Ornithorhynchus_anatinus
ENSCSAVG00000007494	-	95	45.906	ENSOCUG00000008580	TRNT1	93	45.906	Oryctolagus_cuniculus
ENSCSAVG00000007494	-	99	40.749	ENSORLG00000003165	trnt1	99	40.749	Oryzias_latipes
ENSCSAVG00000007494	-	99	41.686	ENSORLG00020022060	trnt1	99	41.686	Oryzias_latipes_hni
ENSCSAVG00000007494	-	99	40.802	ENSORLG00015018915	trnt1	99	40.802	Oryzias_latipes_hsok
ENSCSAVG00000007494	-	95	42.327	ENSOMEG00000003331	trnt1	95	42.327	Oryzias_melastigma
ENSCSAVG00000007494	-	99	44.340	ENSOARG00000008631	TRNT1	97	44.340	Ovis_aries
ENSCSAVG00000007494	-	97	45.894	ENSPPAG00000043566	TRNT1	95	45.894	Pan_paniscus
ENSCSAVG00000007494	-	100	44.471	ENSPPRG00000001327	TRNT1	97	44.471	Panthera_pardus
ENSCSAVG00000007494	-	100	44.471	ENSPTIG00000011448	TRNT1	97	44.471	Panthera_tigris_altaica
ENSCSAVG00000007494	-	97	45.652	ENSPTRG00000014564	TRNT1	95	45.652	Pan_troglodytes
ENSCSAVG00000007494	-	99	44.917	ENSPANG00000025944	TRNT1	96	44.917	Papio_anubis
ENSCSAVG00000007494	-	95	41.523	ENSPKIG00000020015	trnt1	94	41.523	Paramormyrops_kingsleyae
ENSCSAVG00000007494	-	94	44.221	ENSPSIG00000017356	TRNT1	99	44.221	Pelodiscus_sinensis
ENSCSAVG00000007494	-	98	42.143	ENSPMGG00000008888	trnt1	96	42.143	Periophthalmus_magnuspinnatus
ENSCSAVG00000007494	-	99	44.340	ENSPEMG00000019845	Trnt1	97	44.340	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007494	-	99	44.340	ENSPCIG00000030436	TRNT1	97	44.340	Phascolarctos_cinereus
ENSCSAVG00000007494	-	95	41.832	ENSPFOG00000006194	trnt1	94	41.832	Poecilia_formosa
ENSCSAVG00000007494	-	95	41.832	ENSPLAG00000015623	trnt1	99	41.832	Poecilia_latipinna
ENSCSAVG00000007494	-	95	41.626	ENSPMEG00000012216	trnt1	99	41.626	Poecilia_mexicana
ENSCSAVG00000007494	-	95	41.584	ENSPREG00000021470	trnt1	95	41.584	Poecilia_reticulata
ENSCSAVG00000007494	-	99	44.575	ENSPPYG00000013702	TRNT1	97	44.575	Pongo_abelii
ENSCSAVG00000007494	-	91	46.234	ENSPCAG00000001951	TRNT1	100	46.234	Procavia_capensis
ENSCSAVG00000007494	-	98	46.265	ENSPCOG00000022228	TRNT1	95	46.265	Propithecus_coquereli
ENSCSAVG00000007494	-	90	45.431	ENSPVAG00000008784	TRNT1	99	45.431	Pteropus_vampyrus
ENSCSAVG00000007494	-	95	40.347	ENSPNYG00000003120	trnt1	94	40.347	Pundamilia_nyererei
ENSCSAVG00000007494	-	95	42.365	ENSPNAG00000000565	trnt1	94	42.365	Pygocentrus_nattereri
ENSCSAVG00000007494	-	99	44.104	ENSRNOG00000006432	Trnt1	97	44.104	Rattus_norvegicus
ENSCSAVG00000007494	-	99	44.340	ENSRBIG00000042632	TRNT1	97	44.340	Rhinopithecus_bieti
ENSCSAVG00000007494	-	99	44.811	ENSRROG00000036866	TRNT1	97	44.811	Rhinopithecus_roxellana
ENSCSAVG00000007494	-	100	44.706	ENSSBOG00000021208	TRNT1	97	44.706	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007494	-	99	45.047	ENSSHAG00000018861	TRNT1	97	45.047	Sarcophilus_harrisii
ENSCSAVG00000007494	-	95	43.176	ENSSFOG00015020844	trnt1	93	43.176	Scleropages_formosus
ENSCSAVG00000007494	-	98	40.909	ENSSMAG00000015432	trnt1	95	40.909	Scophthalmus_maximus
ENSCSAVG00000007494	-	95	41.337	ENSSDUG00000012320	trnt1	94	41.337	Seriola_dumerili
ENSCSAVG00000007494	-	52	45.909	ENSSLDG00000016463	-	82	44.240	Seriola_lalandi_dorsalis
ENSCSAVG00000007494	-	95	41.089	ENSSLDG00000009325	trnt1	94	41.089	Seriola_lalandi_dorsalis
ENSCSAVG00000007494	-	91	43.377	ENSSPUG00000014153	TRNT1	99	43.377	Sphenodon_punctatus
ENSCSAVG00000007494	-	95	40.594	ENSSPAG00000021005	trnt1	94	40.594	Stegastes_partitus
ENSCSAVG00000007494	-	100	44.235	ENSSSCG00000011529	TRNT1	97	44.235	Sus_scrofa
ENSCSAVG00000007494	-	95	44.554	ENSTGUG00000010192	TRNT1	99	44.554	Taeniopygia_guttata
ENSCSAVG00000007494	-	95	41.584	ENSTRUG00000001088	trnt1	94	41.584	Takifugu_rubripes
ENSCSAVG00000007494	-	95	42.079	ENSTNIG00000007363	trnt1	93	42.079	Tetraodon_nigroviridis
ENSCSAVG00000007494	-	61	41.406	ENSTBEG00000006367	TRNT1	84	41.406	Tupaia_belangeri
ENSCSAVG00000007494	-	100	43.765	ENSTTRG00000007803	TRNT1	97	43.765	Tursiops_truncatus
ENSCSAVG00000007494	-	100	44.706	ENSUAMG00000022574	TRNT1	97	44.706	Ursus_americanus
ENSCSAVG00000007494	-	100	44.706	ENSUMAG00000024092	TRNT1	97	44.706	Ursus_maritimus
ENSCSAVG00000007494	-	98	45.542	ENSVVUG00000012810	TRNT1	95	45.542	Vulpes_vulpes
ENSCSAVG00000007494	-	94	43.176	ENSXETG00000025091	trnt1	98	43.176	Xenopus_tropicalis
ENSCSAVG00000007494	-	95	41.626	ENSXCOG00000010150	trnt1	95	41.626	Xiphophorus_couchianus
ENSCSAVG00000007494	-	95	41.379	ENSXMAG00000002227	trnt1	95	41.379	Xiphophorus_maculatus