EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000007529 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
2867 bases
Position
chrreftig_173:240419-243285
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000012818ResIIIPF04851.152.1e-0911
ENSCSAVP00000012816ResIIIPF04851.154.1e-0911
ENSCSAVP00000012817ResIIIPF04851.154.5e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000012965-2666-ENSCSAVP00000012816773 (aa)-H2Z5F4
ENSCSAVT00000012966-2241-ENSCSAVP00000012817747 (aa)-H2Z5F5
ENSCSAVT00000012967-1878-ENSCSAVP00000012818626 (aa)-H2Z5F6
Gene Model
Click here to download ENSCSAVG00000007529's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007529's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000007529-7731.191ENSCSAVG00000010291-8431.191
ENSCSAVG00000007529-8440.476ENSCSAVG00000004448-5140.476
ENSCSAVG00000007529-9938.291ENSCSAVG00000004620-6741.558
ENSCSAVG00000007529-7840.159ENSCSAVG00000005900-7537.300
ENSCSAVG00000007529-7034.177ENSCSAVG00000002857-6134.177
ENSCSAVG00000007529-5137.234ENSCSAVG00000002116-7137.234
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000007529-9979.284ENSCING00000006076-9679.209Ciona_intestinalis
ENSCSAVG00000007529-8444.283YFR038W-7242.147Saccharomyces_cerevisiae

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