EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
ENSCSAVG00000007538 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
17568 bases
Position
chrreftig_77:2730723-2748290
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000012843RRM_1PF00076.221.7e-5013
ENSCSAVP00000012843RRM_1PF00076.221.7e-5023
ENSCSAVP00000012843RRM_1PF00076.221.7e-5033
ENSCSAVP00000012840RRM_1PF00076.222.3e-5013
ENSCSAVP00000012840RRM_1PF00076.222.3e-5023
ENSCSAVP00000012840RRM_1PF00076.222.3e-5033
ENSCSAVP00000012839RRM_1PF00076.222.4e-5013
ENSCSAVP00000012839RRM_1PF00076.222.4e-5023
ENSCSAVP00000012839RRM_1PF00076.222.4e-5033
ENSCSAVP00000012842RRM_1PF00076.222.6e-5013
ENSCSAVP00000012842RRM_1PF00076.222.6e-5023
ENSCSAVP00000012842RRM_1PF00076.222.6e-5033
ENSCSAVP00000012836RRM_1PF00076.223.3e-5013
ENSCSAVP00000012836RRM_1PF00076.223.3e-5023
ENSCSAVP00000012836RRM_1PF00076.223.3e-5033
ENSCSAVP00000012835RRM_1PF00076.223.5e-5013
ENSCSAVP00000012835RRM_1PF00076.223.5e-5023
ENSCSAVP00000012835RRM_1PF00076.223.5e-5033
ENSCSAVP00000012834RRM_1PF00076.224.1e-5013
ENSCSAVP00000012834RRM_1PF00076.224.1e-5023
ENSCSAVP00000012834RRM_1PF00076.224.1e-5033
ENSCSAVP00000012838RRM_1PF00076.223.6e-4513
ENSCSAVP00000012838RRM_1PF00076.223.6e-4523
ENSCSAVP00000012838RRM_1PF00076.223.6e-4533
ENSCSAVP00000012841RRM_1PF00076.224.4e-3912
ENSCSAVP00000012841RRM_1PF00076.224.4e-3922
ENSCSAVP00000012837RRM_1PF00076.224.8e-3712
ENSCSAVP00000012837RRM_1PF00076.224.8e-3722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000012988-2153-ENSCSAVP00000012839480 (aa)-H2Z5H7
ENSCSAVT00000012989-2009-ENSCSAVP00000012840474 (aa)-H2Z5H8
ENSCSAVT00000012991-1464-ENSCSAVP00000012842487 (aa)-H2Z5I0
ENSCSAVT00000012990-1894-ENSCSAVP00000012841412 (aa)-H2Z5H9
ENSCSAVT00000012992-1419-ENSCSAVP00000012843472 (aa)-H2Z5I1
ENSCSAVT00000012983-1754-ENSCSAVP00000012834544 (aa)-H2Z5H2
ENSCSAVT00000012986-1603-ENSCSAVP00000012837496 (aa)-H2Z5H5
ENSCSAVT00000012987-1670-ENSCSAVP00000012838549 (aa)-H2Z5H6
ENSCSAVT00000012984-1706-ENSCSAVP00000012835529 (aa)-H2Z5H3
ENSCSAVT00000012985-1661-ENSCSAVP00000012836515 (aa)-H2Z5H4
Gene Model
Click here to download ENSCSAVG00000007538's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007538's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000007538-9947.059ENSCSAVG00000007662-9947.059
ENSCSAVG00000007538-5335.443ENSCSAVG00000009321-6535.443
ENSCSAVG00000007538-6934.940ENSCSAVG00000004246-7134.247
ENSCSAVG00000007538-9837.179ENSCSAVG00000003440-9837.179

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