EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2215 bases
Position: chrreftig_26:1062600-1064814
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012844	PHF5	PF03660.14	2.5e-50	1	1
ENSCSAVP00000012845	PHF5	PF03660.14	1.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000012994	-	550	-	ENSCSAVP00000012845	102 (aa)	-	H2Z5I3
ENSCSAVT00000012993	-	865	-	ENSCSAVP00000012844	110 (aa)	-	H2Z5I2

Gene Model

Click here to download ENSCSAVG00000007539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007539	-	100	97.273	ENSG00000100410	PHF5A	100	97.273	Homo_sapiens
ENSCSAVG00000007539	-	100	97.273	ENSAPOG00000017805	phf5a	100	97.273	Acanthochromis_polyacanthus
ENSCSAVG00000007539	-	74	97.531	ENSAMEG00000015687	PHF5A	100	97.531	Ailuropoda_melanoleuca
ENSCSAVG00000007539	-	100	97.059	ENSACIG00000021628	phf5a	100	97.059	Amphilophus_citrinellus
ENSCSAVG00000007539	-	100	97.273	ENSAOCG00000020917	phf5a	100	97.273	Amphiprion_ocellaris
ENSCSAVG00000007539	-	100	97.273	ENSAPEG00000020260	phf5a	100	97.273	Amphiprion_percula
ENSCSAVG00000007539	-	100	97.273	ENSATEG00000006506	phf5a	100	97.273	Anabas_testudineus
ENSCSAVG00000007539	-	100	97.273	ENSATEG00000007455	phf5a	100	97.273	Anabas_testudineus
ENSCSAVG00000007539	-	100	97.273	ENSACAG00000004775	PHF5A	100	97.273	Anolis_carolinensis
ENSCSAVG00000007539	-	100	79.091	ENSANAG00000022538	-	100	79.091	Aotus_nancymaae
ENSCSAVG00000007539	-	100	97.273	ENSANAG00000028988	-	100	97.273	Aotus_nancymaae
ENSCSAVG00000007539	-	99	91.089	ENSANAG00000020141	-	92	91.089	Aotus_nancymaae
ENSCSAVG00000007539	-	100	80.909	ENSANAG00000036831	-	100	80.909	Aotus_nancymaae
ENSCSAVG00000007539	-	100	97.273	ENSACLG00000019161	phf5a	100	97.059	Astatotilapia_calliptera
ENSCSAVG00000007539	-	100	97.273	ENSAMXG00000035422	phf5a	100	97.273	Astyanax_mexicanus
ENSCSAVG00000007539	-	100	97.273	ENSBTAG00000006423	PHF5A	100	97.273	Bos_taurus
ENSCSAVG00000007539	-	99	91.743	WBGene00004016	phf-5	99	91.743	Caenorhabditis_elegans
ENSCSAVG00000007539	-	100	97.273	ENSCJAG00000004999	PHF5A	100	97.273	Callithrix_jacchus
ENSCSAVG00000007539	-	100	97.273	ENSCAFG00000001090	PHF5A	100	97.273	Canis_familiaris
ENSCSAVG00000007539	-	100	97.273	ENSCAFG00020001984	PHF5A	100	97.273	Canis_lupus_dingo
ENSCSAVG00000007539	-	100	92.523	ENSCHIG00000015826	PHF5A	100	92.523	Capra_hircus
ENSCSAVG00000007539	-	100	97.273	ENSTSYG00000001082	PHF5A	100	97.273	Carlito_syrichta
ENSCSAVG00000007539	-	82	97.619	ENSCAPG00000007769	PHF5A	87	97.647	Cavia_aperea
ENSCSAVG00000007539	-	100	97.273	ENSCPOG00000033309	PHF5A	100	97.273	Cavia_porcellus
ENSCSAVG00000007539	-	100	97.273	ENSCCAG00000037141	-	100	97.273	Cebus_capucinus
ENSCSAVG00000007539	-	100	83.333	ENSCCAG00000037275	-	100	83.333	Cebus_capucinus
ENSCSAVG00000007539	-	100	65.455	ENSCCAG00000009204	-	100	65.455	Cebus_capucinus
ENSCSAVG00000007539	-	100	97.273	ENSCATG00000012251	PHF5A	100	97.273	Cercocebus_atys
ENSCSAVG00000007539	-	100	67.568	ENSCLAG00000014324	-	100	67.568	Chinchilla_lanigera
ENSCSAVG00000007539	-	100	97.273	ENSCLAG00000016714	-	100	97.273	Chinchilla_lanigera
ENSCSAVG00000007539	-	100	97.273	ENSCSAG00000005811	PHF5A	100	97.273	Chlorocebus_sabaeus
ENSCSAVG00000007539	-	100	88.182	ENSCHOG00000003545	PHF5A	100	88.182	Choloepus_hoffmanni
ENSCSAVG00000007539	-	100	97.273	ENSCPBG00000020547	PHF5A	100	97.273	Chrysemys_picta_bellii
ENSCSAVG00000007539	-	100	97.273	ENSCANG00000032125	PHF5A	100	97.273	Colobus_angolensis_palliatus
ENSCSAVG00000007539	-	100	97.273	ENSCGRG00001017936	Phf5a	100	97.273	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007539	-	100	97.273	ENSCGRG00000012081	Phf5a	100	97.273	Cricetulus_griseus_crigri
ENSCSAVG00000007539	-	100	97.059	ENSCSEG00000020499	phf5a	100	97.059	Cynoglossus_semilaevis
ENSCSAVG00000007539	-	100	97.273	ENSCVAG00000006090	phf5a	100	97.273	Cyprinodon_variegatus
ENSCSAVG00000007539	-	100	97.273	ENSDARG00000045155	phf5a	100	97.273	Danio_rerio
ENSCSAVG00000007539	-	74	97.531	ENSDNOG00000034362	PHF5A	70	97.531	Dasypus_novemcinctus
ENSCSAVG00000007539	-	100	97.273	ENSDORG00000002205	Phf5a	100	97.273	Dipodomys_ordii
ENSCSAVG00000007539	-	100	94.545	FBgn0031822	Phf5a	99	94.545	Drosophila_melanogaster
ENSCSAVG00000007539	-	100	97.273	ENSETEG00000010741	PHF5A	100	97.273	Echinops_telfairi
ENSCSAVG00000007539	-	100	95.192	ENSEBUG00000009125	-	100	95.192	Eptatretus_burgeri
ENSCSAVG00000007539	-	100	97.273	ENSEASG00005001560	PHF5A	100	97.273	Equus_asinus_asinus
ENSCSAVG00000007539	-	100	97.273	ENSECAG00000023225	PHF5A	100	97.273	Equus_caballus
ENSCSAVG00000007539	-	100	97.273	ENSELUG00000019796	phf5a	100	97.273	Esox_lucius
ENSCSAVG00000007539	-	100	97.273	ENSFCAG00000003676	PHF5A	100	97.273	Felis_catus
ENSCSAVG00000007539	-	85	97.849	ENSFALG00000011963	PHF5A	100	97.849	Ficedula_albicollis
ENSCSAVG00000007539	-	100	97.273	ENSFDAG00000010822	PHF5A	100	97.273	Fukomys_damarensis
ENSCSAVG00000007539	-	100	97.273	ENSFHEG00000012724	phf5a	100	97.273	Fundulus_heteroclitus
ENSCSAVG00000007539	-	99	97.030	ENSGMOG00000013318	phf5a	98	97.030	Gadus_morhua
ENSCSAVG00000007539	-	100	97.273	ENSGALG00000011953	PHF5A	100	97.273	Gallus_gallus
ENSCSAVG00000007539	-	100	97.273	ENSGAFG00000008235	phf5a	100	97.273	Gambusia_affinis
ENSCSAVG00000007539	-	100	97.059	ENSGACG00000004777	phf5a	100	97.059	Gasterosteus_aculeatus
ENSCSAVG00000007539	-	100	97.059	ENSGAGG00000017494	PHF5A	100	97.059	Gopherus_agassizii
ENSCSAVG00000007539	-	100	97.273	ENSGGOG00000001104	PHF5A	100	97.273	Gorilla_gorilla
ENSCSAVG00000007539	-	100	97.059	ENSHBUG00000004040	phf5a	100	89.815	Haplochromis_burtoni
ENSCSAVG00000007539	-	99	88.073	ENSHGLG00000020143	-	100	88.073	Heterocephalus_glaber_female
ENSCSAVG00000007539	-	100	97.273	ENSHGLG00000012537	PHF5A	100	97.273	Heterocephalus_glaber_female
ENSCSAVG00000007539	-	74	92.593	ENSHGLG00100000188	-	86	92.593	Heterocephalus_glaber_male
ENSCSAVG00000007539	-	100	78.102	ENSHCOG00000010129	phf5a	100	78.102	Hippocampus_comes
ENSCSAVG00000007539	-	100	97.273	ENSIPUG00000001222	phf5a	100	97.273	Ictalurus_punctatus
ENSCSAVG00000007539	-	100	97.273	ENSSTOG00000016207	PHF5A	100	97.273	Ictidomys_tridecemlineatus
ENSCSAVG00000007539	-	100	97.273	ENSJJAG00000011261	Phf5a	100	97.273	Jaculus_jaculus
ENSCSAVG00000007539	-	100	97.273	ENSKMAG00000006739	phf5a	100	97.273	Kryptolebias_marmoratus
ENSCSAVG00000007539	-	100	97.273	ENSLBEG00000002141	phf5a	100	97.273	Labrus_bergylta
ENSCSAVG00000007539	-	74	97.531	ENSLACG00000012094	PHF5A	87	97.531	Latimeria_chalumnae
ENSCSAVG00000007539	-	100	97.273	ENSLAFG00000028840	PHF5A	100	97.273	Loxodonta_africana
ENSCSAVG00000007539	-	100	97.273	ENSMFAG00000003129	PHF5A	100	97.273	Macaca_fascicularis
ENSCSAVG00000007539	-	74	86.420	ENSMMUG00000019698	-	100	86.420	Macaca_mulatta
ENSCSAVG00000007539	-	100	90.909	ENSMMUG00000011354	-	100	90.909	Macaca_mulatta
ENSCSAVG00000007539	-	97	82.243	ENSMNEG00000010618	-	96	82.243	Macaca_nemestrina
ENSCSAVG00000007539	-	100	97.273	ENSMNEG00000045104	PHF5A	100	97.273	Macaca_nemestrina
ENSCSAVG00000007539	-	88	88.660	ENSMLEG00000038352	-	84	88.660	Mandrillus_leucophaeus
ENSCSAVG00000007539	-	100	97.273	ENSMLEG00000037662	PHF5A	100	97.273	Mandrillus_leucophaeus
ENSCSAVG00000007539	-	100	97.273	ENSMAMG00000003744	phf5a	100	97.273	Mastacembelus_armatus
ENSCSAVG00000007539	-	100	97.273	ENSMZEG00005019188	phf5a	74	97.273	Maylandia_zebra
ENSCSAVG00000007539	-	100	97.273	ENSMGAG00000012169	PHF5A	100	97.273	Meleagris_gallopavo
ENSCSAVG00000007539	-	100	97.273	ENSMAUG00000017124	Phf5a	100	97.273	Mesocricetus_auratus
ENSCSAVG00000007539	-	100	97.273	ENSMICG00000013520	PHF5A	100	97.273	Microcebus_murinus
ENSCSAVG00000007539	-	100	97.273	ENSMOCG00000015149	Phf5a	100	97.273	Microtus_ochrogaster
ENSCSAVG00000007539	-	100	97.059	ENSMMOG00000003636	phf5a	100	97.059	Mola_mola
ENSCSAVG00000007539	-	100	97.273	ENSMODG00000016556	PHF5A	100	97.273	Monodelphis_domestica
ENSCSAVG00000007539	-	100	97.273	ENSMALG00000008655	phf5a	100	97.273	Monopterus_albus
ENSCSAVG00000007539	-	100	97.273	MGP_CAROLIEiJ_G0020061	Phf5a	100	97.273	Mus_caroli
ENSCSAVG00000007539	-	100	97.273	ENSMUSG00000061360	Phf5a	100	97.273	Mus_musculus
ENSCSAVG00000007539	-	100	97.273	MGP_PahariEiJ_G0020063	Phf5a	100	97.273	Mus_pahari
ENSCSAVG00000007539	-	100	97.273	ENSMPUG00000016398	PHF5A	100	97.273	Mustela_putorius_furo
ENSCSAVG00000007539	-	100	97.273	ENSMLUG00000002465	PHF5A	100	97.273	Myotis_lucifugus
ENSCSAVG00000007539	-	100	97.273	ENSNGAG00000001430	Phf5a	100	97.273	Nannospalax_galili
ENSCSAVG00000007539	-	100	97.059	ENSNBRG00000004747	phf5a	100	97.059	Neolamprologus_brichardi
ENSCSAVG00000007539	-	74	97.531	ENSNLEG00000015481	-	100	97.531	Nomascus_leucogenys
ENSCSAVG00000007539	-	84	97.826	ENSMEUG00000002019	PHF5A	100	97.826	Notamacropus_eugenii
ENSCSAVG00000007539	-	100	97.273	ENSOPRG00000000358	PHF5A	100	97.273	Ochotona_princeps
ENSCSAVG00000007539	-	100	82.727	ENSODEG00000012449	-	100	82.727	Octodon_degus
ENSCSAVG00000007539	-	100	97.273	ENSODEG00000013125	-	100	97.273	Octodon_degus
ENSCSAVG00000007539	-	100	97.273	ENSONIG00000019693	phf5a	100	97.273	Oreochromis_niloticus
ENSCSAVG00000007539	-	85	97.849	ENSOANG00000000616	-	100	97.849	Ornithorhynchus_anatinus
ENSCSAVG00000007539	-	100	97.273	ENSOCUG00000012705	PHF5A	100	97.273	Oryctolagus_cuniculus
ENSCSAVG00000007539	-	100	97.273	ENSORLG00000002591	phf5a	100	97.273	Oryzias_latipes
ENSCSAVG00000007539	-	100	97.273	ENSORLG00020007407	phf5a	100	97.273	Oryzias_latipes_hni
ENSCSAVG00000007539	-	100	97.273	ENSORLG00015006160	phf5a	100	97.273	Oryzias_latipes_hsok
ENSCSAVG00000007539	-	100	97.273	ENSOMEG00000008564	phf5a	100	97.273	Oryzias_melastigma
ENSCSAVG00000007539	-	100	85.455	ENSOGAG00000032258	-	100	85.455	Otolemur_garnettii
ENSCSAVG00000007539	-	100	94.545	ENSOGAG00000025336	-	100	94.545	Otolemur_garnettii
ENSCSAVG00000007539	-	100	97.059	ENSOGAG00000002839	-	100	97.059	Otolemur_garnettii
ENSCSAVG00000007539	-	100	97.273	ENSOARG00000018246	PHF5A	99	97.273	Ovis_aries
ENSCSAVG00000007539	-	100	97.273	ENSPPAG00000008422	PHF5A	100	97.273	Pan_paniscus
ENSCSAVG00000007539	-	100	97.273	ENSPPRG00000006194	PHF5A	100	97.273	Panthera_pardus
ENSCSAVG00000007539	-	100	97.273	ENSPTIG00000014228	PHF5A	100	97.273	Panthera_tigris_altaica
ENSCSAVG00000007539	-	100	97.273	ENSPTRG00000014427	PHF5A	100	97.273	Pan_troglodytes
ENSCSAVG00000007539	-	100	73.636	ENSPTRG00000050019	-	100	73.636	Pan_troglodytes
ENSCSAVG00000007539	-	100	97.273	ENSPANG00000011337	PHF5A	100	97.273	Papio_anubis
ENSCSAVG00000007539	-	100	95.455	ENSPKIG00000003100	phf5a	100	95.455	Paramormyrops_kingsleyae
ENSCSAVG00000007539	-	100	97.273	ENSPSIG00000007014	PHF5A	100	97.273	Pelodiscus_sinensis
ENSCSAVG00000007539	-	72	97.260	ENSPMGG00000003502	phf5a	59	97.260	Periophthalmus_magnuspinnatus
ENSCSAVG00000007539	-	100	97.273	ENSPMAG00000002668	phf5a	100	97.273	Petromyzon_marinus
ENSCSAVG00000007539	-	100	97.059	ENSPFOG00000016814	phf5a	100	97.059	Poecilia_formosa
ENSCSAVG00000007539	-	100	97.273	ENSPLAG00000001292	phf5a	100	97.273	Poecilia_latipinna
ENSCSAVG00000007539	-	100	97.273	ENSPMEG00000010165	phf5a	100	97.273	Poecilia_mexicana
ENSCSAVG00000007539	-	100	97.273	ENSPREG00000020700	phf5a	100	97.273	Poecilia_reticulata
ENSCSAVG00000007539	-	100	97.273	ENSPPYG00000011870	PHF5A	100	97.273	Pongo_abelii
ENSCSAVG00000007539	-	100	97.273	ENSPCAG00000009709	PHF5A	100	97.273	Procavia_capensis
ENSCSAVG00000007539	-	100	97.273	ENSPCOG00000014332	PHF5A	100	97.273	Propithecus_coquereli
ENSCSAVG00000007539	-	100	97.273	ENSPVAG00000001162	PHF5A	100	97.273	Pteropus_vampyrus
ENSCSAVG00000007539	-	100	97.273	ENSPNYG00000004375	phf5a	100	97.273	Pundamilia_nyererei
ENSCSAVG00000007539	-	100	97.273	ENSPNAG00000011460	phf5a	100	97.273	Pygocentrus_nattereri
ENSCSAVG00000007539	-	100	97.273	ENSRNOG00000024170	Phf5a	100	97.273	Rattus_norvegicus
ENSCSAVG00000007539	-	100	70.874	ENSRBIG00000044640	-	100	70.874	Rhinopithecus_bieti
ENSCSAVG00000007539	-	74	97.531	ENSRBIG00000030586	-	92	97.531	Rhinopithecus_bieti
ENSCSAVG00000007539	-	100	97.273	ENSRROG00000038952	PHF5A	100	97.273	Rhinopithecus_roxellana
ENSCSAVG00000007539	-	95	57.143	YPR094W	-	98	57.143	Saccharomyces_cerevisiae
ENSCSAVG00000007539	-	74	97.531	ENSSBOG00000025096	-	76	97.531	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007539	-	88	79.381	ENSSBOG00000019049	-	100	80.220	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007539	-	100	86.275	ENSSHAG00000009937	PHF5A	100	86.275	Sarcophilus_harrisii
ENSCSAVG00000007539	-	100	97.273	ENSSFOG00015013765	phf5a	100	97.273	Scleropages_formosus
ENSCSAVG00000007539	-	100	97.059	ENSSMAG00000007054	phf5a	100	97.059	Scophthalmus_maximus
ENSCSAVG00000007539	-	100	97.273	ENSSDUG00000008019	phf5a	100	97.273	Seriola_dumerili
ENSCSAVG00000007539	-	100	97.273	ENSSLDG00000009619	phf5a	100	97.273	Seriola_lalandi_dorsalis
ENSCSAVG00000007539	-	83	89.011	ENSSLDG00000011535	-	100	89.011	Seriola_lalandi_dorsalis
ENSCSAVG00000007539	-	100	96.364	ENSSARG00000003769	PHF5A	100	96.364	Sorex_araneus
ENSCSAVG00000007539	-	100	97.273	ENSSPUG00000011593	PHF5A	100	97.273	Sphenodon_punctatus
ENSCSAVG00000007539	-	100	97.273	ENSSPAG00000022955	phf5a	100	97.273	Stegastes_partitus
ENSCSAVG00000007539	-	100	97.273	ENSSSCG00000035082	PHF5A	100	97.273	Sus_scrofa
ENSCSAVG00000007539	-	85	97.849	ENSTGUG00000009936	PHF5A	100	97.849	Taeniopygia_guttata
ENSCSAVG00000007539	-	100	97.273	ENSTRUG00000023867	phf5a	100	97.273	Takifugu_rubripes
ENSCSAVG00000007539	-	100	97.273	ENSTNIG00000012939	phf5a	100	97.273	Tetraodon_nigroviridis
ENSCSAVG00000007539	-	100	88.182	ENSTBEG00000010945	PHF5A	100	88.182	Tupaia_belangeri
ENSCSAVG00000007539	-	100	97.273	ENSTTRG00000003369	PHF5A	100	97.273	Tursiops_truncatus
ENSCSAVG00000007539	-	74	97.531	ENSUAMG00000022580	PHF5A	95	97.531	Ursus_americanus
ENSCSAVG00000007539	-	100	92.523	ENSUMAG00000021030	PHF5A	100	92.523	Ursus_maritimus
ENSCSAVG00000007539	-	84	97.826	ENSVPAG00000002614	PHF5A	100	97.826	Vicugna_pacos
ENSCSAVG00000007539	-	100	97.273	ENSVVUG00000003634	PHF5A	100	97.273	Vulpes_vulpes
ENSCSAVG00000007539	-	100	97.273	ENSXETG00000006893	phf5a	100	97.273	Xenopus_tropicalis
ENSCSAVG00000007539	-	100	97.059	ENSXCOG00000000364	phf5a	100	97.059	Xiphophorus_couchianus
ENSCSAVG00000007539	-	74	97.531	ENSXMAG00000000679	phf5a	92	97.531	Xiphophorus_maculatus