EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007545 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 10010 bases
Position: chrreftig_19:1164419-1174428
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012852	DBR1	PF05011.13	2.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013001	-	1167	-	ENSCSAVP00000012852	376 (aa)	-	H2Z5J0
ENSCSAVT00000013002	-	1046	-	ENSCSAVP00000012853	195 (aa)	-	H2Z5J1

Gene Model

Click here to download ENSCSAVG00000007545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007545	-	100	56.464	ENSG00000138231	DBR1	94	70.270	Homo_sapiens
ENSCSAVG00000007545	-	100	58.466	ENSAPOG00000004318	dbr1	69	58.466	Acanthochromis_polyacanthus
ENSCSAVG00000007545	-	99	57.713	ENSAMEG00000006272	DBR1	69	57.713	Ailuropoda_melanoleuca
ENSCSAVG00000007545	-	100	57.672	ENSACIG00000020512	dbr1	68	57.672	Amphilophus_citrinellus
ENSCSAVG00000007545	-	100	57.937	ENSAOCG00000008060	dbr1	69	57.937	Amphiprion_ocellaris
ENSCSAVG00000007545	-	100	57.937	ENSAPEG00000021944	dbr1	69	57.937	Amphiprion_percula
ENSCSAVG00000007545	-	100	56.878	ENSATEG00000019673	dbr1	70	56.878	Anabas_testudineus
ENSCSAVG00000007545	-	100	57.105	ENSACAG00000016760	DBR1	70	57.105	Anolis_carolinensis
ENSCSAVG00000007545	-	100	56.464	ENSANAG00000028952	DBR1	70	56.464	Aotus_nancymaae
ENSCSAVG00000007545	-	100	58.730	ENSACLG00000024027	dbr1	72	58.730	Astatotilapia_calliptera
ENSCSAVG00000007545	-	100	58.730	ENSAMXG00000030736	dbr1	66	58.730	Astyanax_mexicanus
ENSCSAVG00000007545	-	100	58.047	ENSBTAG00000019949	DBR1	69	58.047	Bos_taurus
ENSCSAVG00000007545	-	100	45.663	WBGene00000937	dbr-1	78	45.663	Caenorhabditis_elegans
ENSCSAVG00000007545	-	100	56.201	ENSCJAG00000002433	DBR1	69	56.201	Callithrix_jacchus
ENSCSAVG00000007545	-	100	58.311	ENSCAFG00000007501	DBR1	69	58.311	Canis_familiaris
ENSCSAVG00000007545	-	100	58.311	ENSCAFG00020008060	DBR1	69	58.311	Canis_lupus_dingo
ENSCSAVG00000007545	-	100	58.047	ENSCHIG00000026937	DBR1	69	58.047	Capra_hircus
ENSCSAVG00000007545	-	100	56.464	ENSTSYG00000005317	DBR1	69	56.464	Carlito_syrichta
ENSCSAVG00000007545	-	100	53.826	ENSCPOG00000006179	DBR1	69	53.826	Cavia_porcellus
ENSCSAVG00000007545	-	100	56.201	ENSCCAG00000025708	DBR1	70	56.201	Cebus_capucinus
ENSCSAVG00000007545	-	100	56.728	ENSCATG00000032054	DBR1	69	56.728	Cercocebus_atys
ENSCSAVG00000007545	-	100	56.464	ENSCLAG00000001800	DBR1	69	56.464	Chinchilla_lanigera
ENSCSAVG00000007545	-	100	56.464	ENSCSAG00000010977	DBR1	69	56.464	Chlorocebus_sabaeus
ENSCSAVG00000007545	-	100	45.238	ENSCHOG00000000730	DBR1	69	45.238	Choloepus_hoffmanni
ENSCSAVG00000007545	-	100	58.047	ENSCPBG00000007633	DBR1	64	58.047	Chrysemys_picta_bellii
ENSCSAVG00000007545	-	100	81.530	ENSCING00000011388	-	87	81.530	Ciona_intestinalis
ENSCSAVG00000007545	-	100	56.201	ENSCANG00000024237	DBR1	70	56.201	Colobus_angolensis_palliatus
ENSCSAVG00000007545	-	100	57.256	ENSCGRG00001018497	Dbr1	69	57.256	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007545	-	100	51.451	ENSCGRG00000005958	Dbr1	67	51.451	Cricetulus_griseus_crigri
ENSCSAVG00000007545	-	100	56.614	ENSCSEG00000002813	dbr1	67	56.614	Cynoglossus_semilaevis
ENSCSAVG00000007545	-	100	58.730	ENSCVAG00000019969	dbr1	68	58.730	Cyprinodon_variegatus
ENSCSAVG00000007545	-	100	57.407	ENSDARG00000056923	dbr1	66	57.407	Danio_rerio
ENSCSAVG00000007545	-	100	56.464	ENSDNOG00000043630	DBR1	69	56.464	Dasypus_novemcinctus
ENSCSAVG00000007545	-	100	48.926	FBgn0035838	ldbr	78	49.642	Drosophila_melanogaster
ENSCSAVG00000007545	-	100	52.742	ENSEBUG00000007494	dbr1	67	52.742	Eptatretus_burgeri
ENSCSAVG00000007545	-	100	57.256	ENSEASG00005003788	DBR1	69	57.256	Equus_asinus_asinus
ENSCSAVG00000007545	-	100	57.520	ENSECAG00000013920	DBR1	69	57.520	Equus_caballus
ENSCSAVG00000007545	-	100	47.757	ENSEEUG00000007059	DBR1	69	47.757	Erinaceus_europaeus
ENSCSAVG00000007545	-	100	58.201	ENSELUG00000005587	dbr1	68	58.201	Esox_lucius
ENSCSAVG00000007545	-	100	58.047	ENSFCAG00000002229	DBR1	69	58.047	Felis_catus
ENSCSAVG00000007545	-	100	57.784	ENSFALG00000013467	DBR1	60	57.784	Ficedula_albicollis
ENSCSAVG00000007545	-	100	56.728	ENSFDAG00000009524	DBR1	70	56.728	Fukomys_damarensis
ENSCSAVG00000007545	-	100	56.878	ENSFHEG00000001743	dbr1	68	56.878	Fundulus_heteroclitus
ENSCSAVG00000007545	-	100	56.728	ENSGMOG00000006925	dbr1	68	56.728	Gadus_morhua
ENSCSAVG00000007545	-	100	49.077	ENSGALG00000043797	DBR1	67	49.077	Gallus_gallus
ENSCSAVG00000007545	-	100	57.937	ENSGAFG00000001046	dbr1	70	57.937	Gambusia_affinis
ENSCSAVG00000007545	-	100	56.579	ENSGACG00000009122	dbr1	68	56.579	Gasterosteus_aculeatus
ENSCSAVG00000007545	-	100	58.311	ENSGAGG00000001244	DBR1	71	58.311	Gopherus_agassizii
ENSCSAVG00000007545	-	100	50.923	ENSGGOG00000004564	DBR1	68	50.923	Gorilla_gorilla
ENSCSAVG00000007545	-	100	58.730	ENSHBUG00000000882	dbr1	68	58.730	Haplochromis_burtoni
ENSCSAVG00000007545	-	100	56.728	ENSHGLG00000014529	Dbr1	70	56.728	Heterocephalus_glaber_female
ENSCSAVG00000007545	-	100	56.728	ENSHGLG00100013202	Dbr1	70	56.728	Heterocephalus_glaber_male
ENSCSAVG00000007545	-	100	58.730	ENSHCOG00000004179	dbr1	70	58.730	Hippocampus_comes
ENSCSAVG00000007545	-	100	57.143	ENSIPUG00000023749	dbr1	66	57.143	Ictalurus_punctatus
ENSCSAVG00000007545	-	100	56.728	ENSSTOG00000007122	DBR1	69	56.728	Ictidomys_tridecemlineatus
ENSCSAVG00000007545	-	100	56.464	ENSJJAG00000017080	Dbr1	69	56.464	Jaculus_jaculus
ENSCSAVG00000007545	-	100	56.878	ENSKMAG00000004869	dbr1	69	56.878	Kryptolebias_marmoratus
ENSCSAVG00000007545	-	100	57.937	ENSLBEG00000021307	dbr1	67	57.937	Labrus_bergylta
ENSCSAVG00000007545	-	100	58.901	ENSLACG00000005547	DBR1	70	58.901	Latimeria_chalumnae
ENSCSAVG00000007545	-	100	55.820	ENSLOCG00000004160	dbr1	67	55.820	Lepisosteus_oculatus
ENSCSAVG00000007545	-	100	56.728	ENSLAFG00000005827	DBR1	70	56.728	Loxodonta_africana
ENSCSAVG00000007545	-	100	56.728	ENSMFAG00000043642	DBR1	69	56.728	Macaca_fascicularis
ENSCSAVG00000007545	-	100	56.728	ENSMMUG00000021284	DBR1	69	56.728	Macaca_mulatta
ENSCSAVG00000007545	-	100	56.728	ENSMNEG00000041740	DBR1	69	56.728	Macaca_nemestrina
ENSCSAVG00000007545	-	83	47.284	ENSMLEG00000034542	DBR1	57	46.945	Mandrillus_leucophaeus
ENSCSAVG00000007545	-	100	57.143	ENSMAMG00000012205	dbr1	67	57.143	Mastacembelus_armatus
ENSCSAVG00000007545	-	100	58.730	ENSMZEG00005021338	dbr1	68	58.730	Maylandia_zebra
ENSCSAVG00000007545	-	72	52.206	ENSMGAG00000002142	DBR1	63	52.206	Meleagris_gallopavo
ENSCSAVG00000007545	-	100	57.256	ENSMAUG00000010037	Dbr1	70	57.256	Mesocricetus_auratus
ENSCSAVG00000007545	-	100	56.992	ENSMICG00000049533	DBR1	69	56.992	Microcebus_murinus
ENSCSAVG00000007545	-	100	56.464	ENSMOCG00000018746	Dbr1	71	56.464	Microtus_ochrogaster
ENSCSAVG00000007545	-	100	57.672	ENSMMOG00000000719	dbr1	67	57.672	Mola_mola
ENSCSAVG00000007545	-	100	58.466	ENSMODG00000018554	DBR1	69	58.466	Monodelphis_domestica
ENSCSAVG00000007545	-	100	57.407	ENSMALG00000022283	dbr1	65	57.407	Monopterus_albus
ENSCSAVG00000007545	-	100	56.992	MGP_CAROLIEiJ_G0032564	Dbr1	96	60.000	Mus_caroli
ENSCSAVG00000007545	-	100	56.992	ENSMUSG00000032469	Dbr1	96	60.000	Mus_musculus
ENSCSAVG00000007545	-	100	56.464	MGP_PahariEiJ_G0015433	Dbr1	96	60.000	Mus_pahari
ENSCSAVG00000007545	-	100	56.992	MGP_SPRETEiJ_G0033708	Dbr1	96	60.000	Mus_spretus
ENSCSAVG00000007545	-	100	57.784	ENSMPUG00000009230	DBR1	69	57.784	Mustela_putorius_furo
ENSCSAVG00000007545	-	100	58.047	ENSMLUG00000026117	DBR1	69	58.047	Myotis_lucifugus
ENSCSAVG00000007545	-	100	56.992	ENSNGAG00000003518	Dbr1	69	56.992	Nannospalax_galili
ENSCSAVG00000007545	-	100	58.466	ENSNBRG00000016318	dbr1	68	58.466	Neolamprologus_brichardi
ENSCSAVG00000007545	-	100	56.201	ENSNLEG00000032263	DBR1	68	56.201	Nomascus_leucogenys
ENSCSAVG00000007545	-	100	58.201	ENSMEUG00000009188	DBR1	70	58.201	Notamacropus_eugenii
ENSCSAVG00000007545	-	90	50.437	ENSOPRG00000016510	DBR1	68	50.437	Ochotona_princeps
ENSCSAVG00000007545	-	100	57.256	ENSODEG00000018178	DBR1	70	57.256	Octodon_degus
ENSCSAVG00000007545	-	100	58.995	ENSONIG00000013801	dbr1	67	58.995	Oreochromis_niloticus
ENSCSAVG00000007545	-	83	55.556	ENSOANG00000007783	DBR1	64	55.556	Ornithorhynchus_anatinus
ENSCSAVG00000007545	-	92	57.593	ENSOCUG00000015129	DBR1	61	57.593	Oryctolagus_cuniculus
ENSCSAVG00000007545	-	100	56.614	ENSORLG00015001112	dbr1	71	56.614	Oryzias_latipes_hsok
ENSCSAVG00000007545	-	100	56.878	ENSOMEG00000000857	dbr1	72	56.878	Oryzias_melastigma
ENSCSAVG00000007545	-	100	56.992	ENSOGAG00000033095	DBR1	69	56.992	Otolemur_garnettii
ENSCSAVG00000007545	-	100	56.728	ENSOARG00000007589	DBR1	69	56.728	Ovis_aries
ENSCSAVG00000007545	-	100	56.464	ENSPPAG00000031137	DBR1	69	56.464	Pan_paniscus
ENSCSAVG00000007545	-	100	58.047	ENSPPRG00000013629	DBR1	69	58.047	Panthera_pardus
ENSCSAVG00000007545	-	97	56.948	ENSPTIG00000012674	DBR1	67	56.948	Panthera_tigris_altaica
ENSCSAVG00000007545	-	100	56.728	ENSPTRG00000015441	DBR1	69	56.728	Pan_troglodytes
ENSCSAVG00000007545	-	100	56.728	ENSPANG00000012664	DBR1	69	56.728	Papio_anubis
ENSCSAVG00000007545	-	100	57.937	ENSPKIG00000000310	dbr1	66	57.937	Paramormyrops_kingsleyae
ENSCSAVG00000007545	-	82	57.508	ENSPSIG00000015486	DBR1	66	57.508	Pelodiscus_sinensis
ENSCSAVG00000007545	-	100	57.256	ENSPEMG00000020602	Dbr1	69	57.256	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007545	-	100	51.571	ENSPMAG00000008620	dbr1	99	51.571	Petromyzon_marinus
ENSCSAVG00000007545	-	100	57.937	ENSPCIG00000006494	DBR1	69	57.937	Phascolarctos_cinereus
ENSCSAVG00000007545	-	100	57.407	ENSPLAG00000011665	dbr1	70	57.407	Poecilia_latipinna
ENSCSAVG00000007545	-	56	45.972	ENSPLAG00000002421	-	56	45.972	Poecilia_latipinna
ENSCSAVG00000007545	-	57	45.161	ENSPMEG00000020884	-	54	45.161	Poecilia_mexicana
ENSCSAVG00000007545	-	100	57.672	ENSPMEG00000010080	dbr1	70	57.672	Poecilia_mexicana
ENSCSAVG00000007545	-	100	57.672	ENSPREG00000020157	dbr1	70	57.672	Poecilia_reticulata
ENSCSAVG00000007545	-	100	56.464	ENSPPYG00000014139	DBR1	69	56.464	Pongo_abelii
ENSCSAVG00000007545	-	100	55.937	ENSPCAG00000012956	DBR1	97	55.937	Procavia_capensis
ENSCSAVG00000007545	-	100	56.992	ENSPCOG00000016894	DBR1	69	56.992	Propithecus_coquereli
ENSCSAVG00000007545	-	100	48.813	ENSPVAG00000007713	DBR1	69	48.813	Pteropus_vampyrus
ENSCSAVG00000007545	-	100	58.995	ENSPNYG00000015453	dbr1	67	58.995	Pundamilia_nyererei
ENSCSAVG00000007545	-	100	58.730	ENSPNAG00000025595	dbr1	66	58.730	Pygocentrus_nattereri
ENSCSAVG00000007545	-	100	56.728	ENSRNOG00000014588	Dbr1	69	56.728	Rattus_norvegicus
ENSCSAVG00000007545	-	100	56.201	ENSRBIG00000045002	DBR1	69	56.201	Rhinopithecus_bieti
ENSCSAVG00000007545	-	100	56.201	ENSRROG00000044819	DBR1	69	56.201	Rhinopithecus_roxellana
ENSCSAVG00000007545	-	75	40.303	YKL149C	DBR1	80	40.303	Saccharomyces_cerevisiae
ENSCSAVG00000007545	-	100	56.728	ENSSBOG00000032048	DBR1	69	56.728	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007545	-	100	58.730	ENSSHAG00000006752	DBR1	69	58.730	Sarcophilus_harrisii
ENSCSAVG00000007545	-	100	57.407	ENSSFOG00015011410	dbr1	71	57.407	Scleropages_formosus
ENSCSAVG00000007545	-	100	58.730	ENSSMAG00000016078	dbr1	68	58.730	Scophthalmus_maximus
ENSCSAVG00000007545	-	100	58.201	ENSSDUG00000017849	dbr1	66	58.201	Seriola_dumerili
ENSCSAVG00000007545	-	100	57.407	ENSSLDG00000019891	dbr1	67	57.407	Seriola_lalandi_dorsalis
ENSCSAVG00000007545	-	100	54.593	ENSSARG00000009558	-	71	54.593	Sorex_araneus
ENSCSAVG00000007545	-	84	55.172	ENSSPUG00000004724	DBR1	61	55.172	Sphenodon_punctatus
ENSCSAVG00000007545	-	100	57.937	ENSSPAG00000016892	dbr1	68	57.937	Stegastes_partitus
ENSCSAVG00000007545	-	100	56.728	ENSSSCG00000031098	DBR1	70	56.728	Sus_scrofa
ENSCSAVG00000007545	-	95	55.125	ENSTGUG00000007073	DBR1	69	55.125	Taeniopygia_guttata
ENSCSAVG00000007545	-	100	58.793	ENSTRUG00000021594	dbr1	67	58.793	Takifugu_rubripes
ENSCSAVG00000007545	-	100	58.995	ENSTNIG00000006710	dbr1	68	58.995	Tetraodon_nigroviridis
ENSCSAVG00000007545	-	100	57.256	ENSTTRG00000004020	DBR1	69	57.256	Tursiops_truncatus
ENSCSAVG00000007545	-	100	57.520	ENSUAMG00000004639	DBR1	69	57.520	Ursus_americanus
ENSCSAVG00000007545	-	100	57.256	ENSUMAG00000015012	DBR1	69	57.256	Ursus_maritimus
ENSCSAVG00000007545	-	100	52.243	ENSVPAG00000011711	DBR1	69	52.243	Vicugna_pacos
ENSCSAVG00000007545	-	100	58.311	ENSVVUG00000026604	DBR1	69	58.311	Vulpes_vulpes
ENSCSAVG00000007545	-	100	59.367	ENSXETG00000027491	dbr1	71	59.367	Xenopus_tropicalis
ENSCSAVG00000007545	-	100	57.937	ENSXCOG00000018078	dbr1	70	57.937	Xiphophorus_couchianus
ENSCSAVG00000007545	-	100	57.937	ENSXMAG00000007311	dbr1	70	57.937	Xiphophorus_maculatus