EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000007584 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
13888 bases
Position
chrreftig_35:1573899-1587786
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000012912AconitasePF00330.206e-14411
ENSCSAVP00000012911AconitasePF00330.202.5e-13911
ENSCSAVP00000012913AconitasePF00330.207.4e-11611
ENSCSAVP00000012910AconitasePF00330.201.1e-4211
ENSCSAVP00000012910Aconitase_CPF00694.192.2e-4611
ENSCSAVP00000012911Aconitase_CPF00694.194.4e-4611
ENSCSAVP00000012913Aconitase_CPF00694.195.7e-4211
ENSCSAVP00000012912Aconitase_CPF00694.194.2e-4011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000013062-2054-ENSCSAVP00000012913599 (aa)-H2Z5Q1
ENSCSAVT00000013060-2624-ENSCSAVP00000012911682 (aa)-H2Z5P9
ENSCSAVT00000013059-2300-ENSCSAVP00000012910405 (aa)-H2Z5P8
ENSCSAVT00000013061-2596-ENSCSAVP00000012912819 (aa)-H2Z5Q0
Gene Model
Click here to download ENSCSAVG00000007584's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007584's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000007584-9633.696ENSCSAVG00000011708-7932.046
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000007584-9978.708ENSG00000100412ACO29870.869Homo_sapiens
ENSCSAVG00000007584-9979.883ENSAPOG00000011484ACO29872.005Acanthochromis_polyacanthus
ENSCSAVG00000007584-9980.029ENSAPOG00000017786aco29772.249Acanthochromis_polyacanthus
ENSCSAVG00000007584-9976.062ENSAMEG00000015641ACO29868.884Ailuropoda_melanoleuca
ENSCSAVG00000007584-9978.465ENSACIG00000021636aco29978.247Amphilophus_citrinellus
ENSCSAVG00000007584-9980.029ENSAOCG00000019100ACO29872.249Amphiprion_ocellaris
ENSCSAVG00000007584-9980.470ENSAOCG00000020887aco29979.186Amphiprion_ocellaris
ENSCSAVG00000007584-9980.470ENSAPEG00000020171aco29772.494Amphiprion_percula
ENSCSAVG00000007584-9980.176ENSAPEG00000012427ACO29872.372Amphiprion_percula
ENSCSAVG00000007584-9980.470ENSATEG00000007473aco29979.186Anabas_testudineus
ENSCSAVG00000007584-9980.470ENSATEG00000006397aco29979.186Anabas_testudineus
ENSCSAVG00000007584-9980.029ENSATEG00000008001ACO29872.249Anabas_testudineus
ENSCSAVG00000007584-9978.855ENSAPLG00000005198ACO29771.359Anas_platyrhynchos
ENSCSAVG00000007584-9978.414ENSACAG00000004677-9771.114Anolis_carolinensis
ENSCSAVG00000007584-9978.120ENSANAG00000029281ACO29870.379Aotus_nancymaae
ENSCSAVG00000007584-9979.736ENSACLG00000019179aco29677.799Astatotilapia_calliptera
ENSCSAVG00000007584-9980.029ENSAMXG00000008808aco29771.760Astyanax_mexicanus
ENSCSAVG00000007584-8681.625ENSAMXG00000015485ACO29775.683Astyanax_mexicanus
ENSCSAVG00000007584-9978.414ENSBTAG00000006429ACO29870.416Bos_taurus
ENSCSAVG00000007584-9976.878WBGene00000041aco-29976.878Caenorhabditis_elegans
ENSCSAVG00000007584-9976.127ENSCJAG00000005004ACO29977.445Callithrix_jacchus
ENSCSAVG00000007584-9978.708ENSCAFG00000001075ACO29770.991Canis_familiaris
ENSCSAVG00000007584-9978.708ENSCAFG00020001976ACO29770.991Canis_lupus_dingo
ENSCSAVG00000007584-9978.267ENSCHIG00000007877ACO29870.293Capra_hircus
ENSCSAVG00000007584-9978.855ENSTSYG00000001084ACO29877.394Carlito_syrichta
ENSCSAVG00000007584-9979.442ENSCAPG00000017225ACO29871.359Cavia_aperea
ENSCSAVG00000007584-9979.442ENSCPOG00000012642ACO29871.359Cavia_porcellus
ENSCSAVG00000007584-9978.708ENSCCAG00000028378ACO29877.778Cebus_capucinus
ENSCSAVG00000007584-9959.265ENSCATG00000026864-9959.766Cercocebus_atys
ENSCSAVG00000007584-9751.589ENSCATG00000000038-9163.830Cercocebus_atys
ENSCSAVG00000007584-9978.708ENSCATG00000030437ACO29777.460Cercocebus_atys
ENSCSAVG00000007584-9978.855ENSCLAG00000016998ACO29870.747Chinchilla_lanigera
ENSCSAVG00000007584-9978.561ENSCSAG00000005807ACO29870.747Chlorocebus_sabaeus
ENSCSAVG00000007584-6590.411ENSCHOG00000003549ACO26690.411Choloepus_hoffmanni
ENSCSAVG00000007584-9979.001ENSCPBG00000020545ACO29771.481Chrysemys_picta_bellii
ENSCSAVG00000007584-9990.842ENSCING00000008967-9991.084Ciona_intestinalis
ENSCSAVG00000007584-9976.028ENSCANG00000018904ACO28976.028Colobus_angolensis_palliatus
ENSCSAVG00000007584-9979.001ENSCGRG00001023335Aco29870.991Cricetulus_griseus_chok1gshd
ENSCSAVG00000007584-8987.273ENSCGRG00001009672-9078.966Cricetulus_griseus_chok1gshd
ENSCSAVG00000007584-8987.273ENSCGRG00000002318-9078.966Cricetulus_griseus_crigri
ENSCSAVG00000007584-9979.001ENSCGRG00000005122Aco29870.991Cricetulus_griseus_crigri
ENSCSAVG00000007584-9979.589ENSCSEG00000006701ACO29872.005Cynoglossus_semilaevis
ENSCSAVG00000007584-9979.208ENSCSEG00000020501aco29974.545Cynoglossus_semilaevis
ENSCSAVG00000007584-9979.442ENSCVAG00000010923ACO29972.534Cyprinodon_variegatus
ENSCSAVG00000007584-9975.330ENSCVAG00000006081aco29968.215Cyprinodon_variegatus
ENSCSAVG00000007584-9979.589ENSDARG00000007294aco29671.760Danio_rerio
ENSCSAVG00000007584-9976.461ENSDNOG00000018156ACO29764.921Dasypus_novemcinctus
ENSCSAVG00000007584-9979.295ENSDORG00000002209Aco29871.236Dipodomys_ordii
ENSCSAVG00000007584-10074.085FBgn0010100Acon9766.911Drosophila_melanogaster
ENSCSAVG00000007584-10073.021FBgn0037862CG47069765.770Drosophila_melanogaster
ENSCSAVG00000007584-7885.830ENSETEG00000010742ACO27878.116Echinops_telfairi
ENSCSAVG00000007584-8578.161ENSEBUG00000009201aco29674.401Eptatretus_burgeri
ENSCSAVG00000007584-9979.148ENSEASG00005001546ACO29571.236Equus_asinus_asinus
ENSCSAVG00000007584-9979.148ENSECAG00000023762ACO29571.114Equus_caballus
ENSCSAVG00000007584-9976.246ENSEEUG00000010201ACO28776.246Erinaceus_europaeus
ENSCSAVG00000007584-9980.059ENSELUG00000019769aco29871.795Esox_lucius
ENSCSAVG00000007584-9978.708ENSELUG00000007787ACO29977.621Esox_lucius
ENSCSAVG00000007584-9975.606ENSFCAG00000018526ACO29868.459Felis_catus
ENSCSAVG00000007584-9978.708ENSFALG00000011957ACO29972.035Ficedula_albicollis
ENSCSAVG00000007584-9979.001ENSFDAG00000010448ACO29870.991Fukomys_damarensis
ENSCSAVG00000007584-9979.589ENSFHEG00000012709aco29771.760Fundulus_heteroclitus
ENSCSAVG00000007584-9979.883ENSFHEG00000020556ACO29972.909Fundulus_heteroclitus
ENSCSAVG00000007584-9978.120ENSGMOG00000013297aco29870.293Gadus_morhua
ENSCSAVG00000007584-9971.953ENSGMOG00000001946-9865.526Gadus_morhua
ENSCSAVG00000007584-9978.855ENSGALG00000011950ACO29771.359Gallus_gallus
ENSCSAVG00000007584-9979.295ENSGAFG00000008252aco29977.934Gambusia_affinis
ENSCSAVG00000007584-9979.148ENSGAFG00000010889ACO29871.516Gambusia_affinis
ENSCSAVG00000007584-9979.295ENSGACG00000004686aco29972.160Gasterosteus_aculeatus
ENSCSAVG00000007584-9979.001ENSGAGG00000017500ACO29771.359Gopherus_agassizii
ENSCSAVG00000007584-9978.561ENSGGOG00000001107ACO29870.747Gorilla_gorilla
ENSCSAVG00000007584-8765.144ENSGGOG00000037860-9563.291Gorilla_gorilla
ENSCSAVG00000007584-9979.736ENSHBUG00000004106aco29676.361Haplochromis_burtoni
ENSCSAVG00000007584-9979.148ENSHGLG00000015463Aco29871.236Heterocephalus_glaber_female
ENSCSAVG00000007584-9978.561ENSHGLG00100010294ACO29870.747Heterocephalus_glaber_male
ENSCSAVG00000007584-9979.589ENSHCOG00000010190aco29771.271Hippocampus_comes
ENSCSAVG00000007584-9979.883ENSHCOG00000006890ACO29879.206Hippocampus_comes
ENSCSAVG00000007584-9979.589ENSIPUG00000001101aco29978.404Ictalurus_punctatus
ENSCSAVG00000007584-9979.001ENSSTOG00000016210ACO29870.991Ictidomys_tridecemlineatus
ENSCSAVG00000007584-8876.531ENSJJAG00000014029Aco29772.785Jaculus_jaculus
ENSCSAVG00000007584-9979.589ENSKMAG00000014823ACO29871.760Kryptolebias_marmoratus
ENSCSAVG00000007584-5080.473ENSKMAG00000021995aco28775.534Kryptolebias_marmoratus
ENSCSAVG00000007584-9978.708ENSLBEG00000002060aco29977.778Labrus_bergylta
ENSCSAVG00000007584-9272.283ENSLACG00000011854ACO210072.283Latimeria_chalumnae
ENSCSAVG00000007584-8080.805ENSLOCG00000011607aco29567.690Lepisosteus_oculatus
ENSCSAVG00000007584-9978.414ENSLAFG00000006030ACO29870.502Loxodonta_africana
ENSCSAVG00000007584-9978.708ENSMFAG00000043571ACO29877.603Macaca_fascicularis
ENSCSAVG00000007584-9960.267ENSMFAG00000041445-9560.159Macaca_fascicularis
ENSCSAVG00000007584-9978.708ENSMMUG00000001454ACO29870.869Macaca_mulatta
ENSCSAVG00000007584-9978.561ENSMNEG00000044522ACO29870.747Macaca_nemestrina
ENSCSAVG00000007584-9959.265ENSMLEG00000042289-9759.148Mandrillus_leucophaeus
ENSCSAVG00000007584-9978.708ENSMLEG00000031603ACO29877.603Mandrillus_leucophaeus
ENSCSAVG00000007584-9979.148ENSMAMG00000003762aco29977.778Mastacembelus_armatus
ENSCSAVG00000007584-9979.589ENSMAMG00000007378ACO29972.784Mastacembelus_armatus
ENSCSAVG00000007584-9979.736ENSMZEG00005019194aco29677.799Maylandia_zebra
ENSCSAVG00000007584-9978.855ENSMGAG00000012110ACO29771.359Meleagris_gallopavo
ENSCSAVG00000007584-9978.855ENSMAUG00000007598Aco29870.869Mesocricetus_auratus
ENSCSAVG00000007584-9970.630ENSMICG00000013529ACO29863.789Microcebus_murinus
ENSCSAVG00000007584-9979.442ENSMOCG00000008387Aco29871.359Microtus_ochrogaster
ENSCSAVG00000007584-9976.980ENSMMOG00000003639aco29977.308Mola_mola
ENSCSAVG00000007584-9979.589ENSMMOG00000002702ACO29872.372Mola_mola
ENSCSAVG00000007584-9977.680ENSMODG00000016560ACO29770.293Monodelphis_domestica
ENSCSAVG00000007584-9979.001ENSMALG00000013359ACO29871.394Monopterus_albus
ENSCSAVG00000007584-9979.736ENSMALG00000008744aco210072.659Monopterus_albus
ENSCSAVG00000007584-9979.442ENSMUSG00000022477Aco29684.492Mus_musculus
ENSCSAVG00000007584-9979.442MGP_PahariEiJ_G0020064Aco29871.359Mus_pahari
ENSCSAVG00000007584-9979.295MGP_SPRETEiJ_G0020963Aco29871.236Mus_spretus
ENSCSAVG00000007584-9978.855ENSMPUG00000016396ACO29770.991Mustela_putorius_furo
ENSCSAVG00000007584-9977.827ENSMLUG00000002472ACO29869.890Myotis_lucifugus
ENSCSAVG00000007584-9959.677ENSNGAG00000014065-9752.561Nannospalax_galili
ENSCSAVG00000007584-9977.533ENSNGAG00000015866-9869.767Nannospalax_galili
ENSCSAVG00000007584-9979.883ENSNBRG00000004766aco29677.992Neolamprologus_brichardi
ENSCSAVG00000007584-9978.708ENSNLEG00000015482ACO29870.747Nomascus_leucogenys
ENSCSAVG00000007584-9960.355ENSNLEG00000036269-9857.953Nomascus_leucogenys
ENSCSAVG00000007584-9088.479ENSMEUG00000002023ACO29079.599Notamacropus_eugenii
ENSCSAVG00000007584-9977.616ENSOPRG00000000365ACO29869.782Ochotona_princeps
ENSCSAVG00000007584-9979.148ENSODEG00000012550ACO29871.114Octodon_degus
ENSCSAVG00000007584-9980.029ENSONIG00000019690aco29171.883Oreochromis_niloticus
ENSCSAVG00000007584-9976.358ENSOANG00000003550ACO29768.666Ornithorhynchus_anatinus
ENSCSAVG00000007584-9978.414ENSOCUG00000021368ACO29570.502Oryctolagus_cuniculus
ENSCSAVG00000007584-9979.295ENSORLG00000002618aco29771.114Oryzias_latipes
ENSCSAVG00000007584-9979.589ENSORLG00020007394aco29771.359Oryzias_latipes_hni
ENSCSAVG00000007584-9979.589ENSORLG00015006146aco29771.359Oryzias_latipes_hsok
ENSCSAVG00000007584-9979.148ENSOMEG00000000704aco29771.114Oryzias_melastigma
ENSCSAVG00000007584-9975.000ENSOGAG00000002845ACO29473.550Otolemur_garnettii
ENSCSAVG00000007584-9977.239ENSOARG00000018307ACO29769.438Ovis_aries
ENSCSAVG00000007584-9950.084ENSPPAG00000041996-9449.596Pan_paniscus
ENSCSAVG00000007584-9978.708ENSPPAG00000019653ACO29870.869Pan_paniscus
ENSCSAVG00000007584-9978.708ENSPPRG00000005996ACO29770.869Panthera_pardus
ENSCSAVG00000007584-9978.561ENSPTIG00000014744ACO29770.747Panthera_tigris_altaica
ENSCSAVG00000007584-8864.306ENSPTRG00000048121-9462.834Pan_troglodytes
ENSCSAVG00000007584-9978.708ENSPTRG00000014428ACO29870.869Pan_troglodytes
ENSCSAVG00000007584-9952.717ENSPANG00000032070-9748.103Papio_anubis
ENSCSAVG00000007584-9976.127ENSPANG00000024107-9977.603Papio_anubis
ENSCSAVG00000007584-9978.855ENSPKIG00000008567aco29977.778Paramormyrops_kingsleyae
ENSCSAVG00000007584-9969.604ENSPKIG00000003055ACO29571.179Paramormyrops_kingsleyae
ENSCSAVG00000007584-9978.414ENSPSIG00000007077ACO29770.991Pelodiscus_sinensis
ENSCSAVG00000007584-9975.373ENSPMGG00000003518aco29971.987Periophthalmus_magnuspinnatus
ENSCSAVG00000007584-9979.442ENSPEMG00000021158Aco29871.359Peromyscus_maniculatus_bairdii
ENSCSAVG00000007584-9977.974ENSPCIG00000026414ACO29770.379Phascolarctos_cinereus
ENSCSAVG00000007584-9979.883ENSPFOG00000016765aco29771.883Poecilia_formosa
ENSCSAVG00000007584-9979.589ENSPLAG00000001300aco29978.247Poecilia_latipinna
ENSCSAVG00000007584-9979.883ENSPLAG00000017481ACO29872.005Poecilia_latipinna
ENSCSAVG00000007584-9979.883ENSPMEG00000010286aco29978.560Poecilia_mexicana
ENSCSAVG00000007584-9979.883ENSPMEG00000018305ACO29872.005Poecilia_mexicana
ENSCSAVG00000007584-9979.442ENSPREG00000020672aco29978.091Poecilia_reticulata
ENSCSAVG00000007584-9976.065ENSPREG00000017594ACO29869.315Poecilia_reticulata
ENSCSAVG00000007584-9978.855ENSPPYG00000011871ACO29871.114Pongo_abelii
ENSCSAVG00000007584-9976.758ENSPCAG00000009742ACO29869.268Procavia_capensis
ENSCSAVG00000007584-9978.708ENSPCOG00000017488ACO29870.624Propithecus_coquereli
ENSCSAVG00000007584-9975.779ENSPVAG00000001163ACO29868.171Pteropus_vampyrus
ENSCSAVG00000007584-9979.589ENSPNYG00000004399aco29677.606Pundamilia_nyererei
ENSCSAVG00000007584-9980.176ENSPNAG00000013876ACO29772.005Pygocentrus_nattereri
ENSCSAVG00000007584-9979.295ENSRNOG00000024128Aco29871.236Rattus_norvegicus
ENSCSAVG00000007584-8876.339ENSRBIG00000035174ACO29773.828Rhinopithecus_bieti
ENSCSAVG00000007584-9978.708ENSRROG00000005066ACO29870.869Rhinopithecus_roxellana
ENSCSAVG00000007584-9967.894YLR304CACO19661.721Saccharomyces_cerevisiae
ENSCSAVG00000007584-8081.519ENSSBOG00000021699-9776.310Saimiri_boliviensis_boliviensis
ENSCSAVG00000007584-9975.495ENSSBOG00000029050-9073.128Saimiri_boliviensis_boliviensis
ENSCSAVG00000007584-9977.974ENSSHAG00000010092ACO29770.502Sarcophilus_harrisii
ENSCSAVG00000007584-9979.001ENSSFOG00015013704aco29978.213Scleropages_formosus
ENSCSAVG00000007584-9979.971ENSSMAG00000007063aco29878.650Scophthalmus_maximus
ENSCSAVG00000007584-9980.029ENSSMAG00000005805ACO29572.249Scophthalmus_maximus
ENSCSAVG00000007584-9980.323ENSSDUG00000014898ACO29872.249Seriola_dumerili
ENSCSAVG00000007584-9979.736ENSSDUG00000008036aco29978.404Seriola_dumerili
ENSCSAVG00000007584-9980.029ENSSLDG00000018236ACO29872.005Seriola_lalandi_dorsalis
ENSCSAVG00000007584-9979.736ENSSLDG00000009538aco29976.369Seriola_lalandi_dorsalis
ENSCSAVG00000007584-6290.323ENSSARG00000004424-5490.323Sorex_araneus
ENSCSAVG00000007584-9978.120ENSSPUG00000011600ACO29770.502Sphenodon_punctatus
ENSCSAVG00000007584-9979.148ENSSPAG00000022958aco29771.394Stegastes_partitus
ENSCSAVG00000007584-9979.883ENSSPAG00000017882ACO29973.034Stegastes_partitus
ENSCSAVG00000007584-9978.561ENSSSCG00000000064ACO29770.624Sus_scrofa
ENSCSAVG00000007584-9978.561ENSTGUG00000009907ACO29971.114Taeniopygia_guttata
ENSCSAVG00000007584-9979.883ENSTRUG00000017021aco29771.883Takifugu_rubripes
ENSCSAVG00000007584-9980.470ENSTNIG00000012938aco29772.494Tetraodon_nigroviridis
ENSCSAVG00000007584-9978.561ENSTBEG00000011060ACO29870.257Tupaia_belangeri
ENSCSAVG00000007584-9972.521ENSTTRG00000003371ACO29865.914Tursiops_truncatus
ENSCSAVG00000007584-9978.855ENSUAMG00000022582ACO29570.991Ursus_americanus
ENSCSAVG00000007584-9979.001ENSUMAG00000021024ACO29771.114Ursus_maritimus
ENSCSAVG00000007584-7079.268ENSVPAG00000002616-5971.000Vicugna_pacos
ENSCSAVG00000007584-9978.708ENSVVUG00000003619ACO29770.991Vulpes_vulpes
ENSCSAVG00000007584-9964.275ENSXETG00000006892aco29859.440Xenopus_tropicalis
ENSCSAVG00000007584-9976.934ENSXCOG00000016019ACO29869.343Xiphophorus_couchianus
ENSCSAVG00000007584-9978.465ENSXCOG00000000374aco29878.247Xiphophorus_couchianus
ENSCSAVG00000007584-9979.589ENSXMAG00000006870ACO29871.883Xiphophorus_maculatus
ENSCSAVG00000007584-9979.442ENSXMAG00000000683aco29771.516Xiphophorus_maculatus

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