EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007589 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 17160 bases
Position: chrreftig_41:1626874-1644033
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	1	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	2	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	3	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	4	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	5	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	6	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	7	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	8	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	9	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	10	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	11	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	12	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	13	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	14	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	15	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	16	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	17	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	18	19
ENSCSAVP00000012927	zf-C2H2	PF00096.26	1.1e-95	19	19
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	1	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	2	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	3	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	4	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	5	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	6	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	7	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	8	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	9	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	10	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	11	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	12	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	13	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	14	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	15	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	16	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	17	18
ENSCSAVP00000012926	zf-C2H2	PF00096.26	7.7e-92	18	18
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	1	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	2	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	3	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	4	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	5	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	6	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	7	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	8	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	9	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	10	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	11	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	12	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	13	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	14	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	15	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	16	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	17	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	18	19
ENSCSAVP00000012924	zf-C2H2	PF00096.26	6.5e-91	19	19
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	1	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	2	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	3	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	4	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	5	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	6	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	7	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	8	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	9	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	10	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	11	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	12	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	13	14
ENSCSAVP00000012925	zf-C2H2	PF00096.26	1.2e-74	14	14
ENSCSAVP00000012927	zf-met	PF12874.7	2.3e-33	1	5
ENSCSAVP00000012927	zf-met	PF12874.7	2.3e-33	2	5
ENSCSAVP00000012927	zf-met	PF12874.7	2.3e-33	3	5
ENSCSAVP00000012927	zf-met	PF12874.7	2.3e-33	4	5
ENSCSAVP00000012927	zf-met	PF12874.7	2.3e-33	5	5
ENSCSAVP00000012926	zf-met	PF12874.7	2.7e-32	1	5
ENSCSAVP00000012926	zf-met	PF12874.7	2.7e-32	2	5
ENSCSAVP00000012926	zf-met	PF12874.7	2.7e-32	3	5
ENSCSAVP00000012926	zf-met	PF12874.7	2.7e-32	4	5
ENSCSAVP00000012926	zf-met	PF12874.7	2.7e-32	5	5
ENSCSAVP00000012924	zf-met	PF12874.7	4.9e-31	1	5
ENSCSAVP00000012924	zf-met	PF12874.7	4.9e-31	2	5
ENSCSAVP00000012924	zf-met	PF12874.7	4.9e-31	3	5
ENSCSAVP00000012924	zf-met	PF12874.7	4.9e-31	4	5
ENSCSAVP00000012924	zf-met	PF12874.7	4.9e-31	5	5
ENSCSAVP00000012925	zf-met	PF12874.7	3.9e-26	1	6
ENSCSAVP00000012925	zf-met	PF12874.7	3.9e-26	2	6
ENSCSAVP00000012925	zf-met	PF12874.7	3.9e-26	3	6
ENSCSAVP00000012925	zf-met	PF12874.7	3.9e-26	4	6
ENSCSAVP00000012925	zf-met	PF12874.7	3.9e-26	5	6
ENSCSAVP00000012925	zf-met	PF12874.7	3.9e-26	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013073	-	2046	-	ENSCSAVP00000012924	682 (aa)	-	H2Z5R2
ENSCSAVT00000013075	-	2031	-	ENSCSAVP00000012926	676 (aa)	-	H2Z5R4
ENSCSAVT00000013074	-	1803	-	ENSCSAVP00000012925	601 (aa)	-	H2Z5R3
ENSCSAVT00000013076	-	2118	-	ENSCSAVP00000012927	705 (aa)	-	H2Z5R5

Gene Model

Click here to download ENSCSAVG00000007589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007589	-	100	43.956	ENSCSAVG00000011146	-	93	43.956
ENSCSAVG00000007589	-	100	38.732	ENSCSAVG00000009739	-	66	38.732
ENSCSAVG00000007589	-	99	46.429	ENSCSAVG00000006650	-	98	43.452
ENSCSAVG00000007589	-	100	51.866	ENSCSAVG00000000293	-	100	51.866
ENSCSAVG00000007589	-	100	43.529	ENSCSAVG00000009574	-	100	43.529
ENSCSAVG00000007589	-	99	41.509	ENSCSAVG00000010662	-	54	31.818
ENSCSAVG00000007589	-	100	42.647	ENSCSAVG00000005904	-	100	42.647
ENSCSAVG00000007589	-	100	41.718	ENSCSAVG00000001949	-	99	47.059
ENSCSAVG00000007589	-	100	37.391	ENSCSAVG00000006729	-	75	37.391
ENSCSAVG00000007589	-	100	45.818	ENSCSAVG00000010156	-	96	45.745
ENSCSAVG00000007589	-	100	32.540	ENSCSAVG00000005896	-	70	32.540
ENSCSAVG00000007589	-	100	47.847	ENSCSAVG00000001989	-	100	48.553
ENSCSAVG00000007589	-	99	37.118	ENSCSAVG00000006745	-	98	33.485
ENSCSAVG00000007589	-	99	57.746	ENSCSAVG00000000655	-	99	57.746
ENSCSAVG00000007589	-	99	50.000	ENSCSAVG00000004543	-	100	42.500
ENSCSAVG00000007589	-	100	48.565	ENSCSAVG00000000673	-	100	48.565
ENSCSAVG00000007589	-	100	49.844	ENSCSAVG00000001808	-	100	49.844
ENSCSAVG00000007589	-	100	53.390	ENSCSAVG00000000690	-	100	53.390
ENSCSAVG00000007589	-	100	49.425	ENSCSAVG00000004762	-	100	49.425
ENSCSAVG00000007589	-	100	47.406	ENSCSAVG00000010960	-	100	47.991
ENSCSAVG00000007589	-	100	47.200	ENSCSAVG00000000520	-	100	47.059
ENSCSAVG00000007589	-	100	52.703	ENSCSAVG00000009583	-	100	52.529
ENSCSAVG00000007589	-	100	52.980	ENSCSAVG00000000642	-	100	52.980
ENSCSAVG00000007589	-	99	41.053	ENSCSAVG00000006028	-	89	41.053
ENSCSAVG00000007589	-	100	48.627	ENSCSAVG00000004703	-	100	48.319
ENSCSAVG00000007589	-	97	50.000	ENSCSAVG00000003690	-	100	50.000
ENSCSAVG00000007589	-	100	45.098	ENSCSAVG00000006608	-	100	48.315
ENSCSAVG00000007589	-	100	49.144	ENSCSAVG00000007918	-	100	49.370
ENSCSAVG00000007589	-	100	50.000	ENSCSAVG00000009953	-	99	50.000
ENSCSAVG00000007589	-	100	46.763	ENSCSAVG00000006141	-	100	46.763
ENSCSAVG00000007589	-	100	46.988	ENSCSAVG00000003895	-	100	46.988
ENSCSAVG00000007589	-	99	41.509	ENSCSAVG00000011749	-	91	40.000
ENSCSAVG00000007589	-	100	49.515	ENSCSAVG00000002179	-	100	49.515
ENSCSAVG00000007589	-	99	37.778	ENSCSAVG00000009819	-	83	37.778
ENSCSAVG00000007589	-	67	39.683	ENSCSAVG00000006755	-	97	42.000
ENSCSAVG00000007589	-	100	44.802	ENSCSAVG00000004678	-	99	44.802
ENSCSAVG00000007589	-	100	49.113	ENSCSAVG00000000649	-	99	49.113
ENSCSAVG00000007589	-	99	46.000	ENSCSAVG00000009421	-	72	42.000
ENSCSAVG00000007589	-	100	48.485	ENSCSAVG00000001834	-	100	48.552
ENSCSAVG00000007589	-	100	54.074	ENSCSAVG00000001830	-	99	54.074
ENSCSAVG00000007589	-	100	51.604	ENSCSAVG00000004499	-	100	52.000
ENSCSAVG00000007589	-	100	56.250	ENSCSAVG00000008862	-	99	56.250
ENSCSAVG00000007589	-	100	34.667	ENSCSAVG00000009217	-	100	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007589	-	100	32.984	ENSAPOG00000001097	-	62	36.667	Acanthochromis_polyacanthus
ENSCSAVG00000007589	-	100	40.351	ENSATEG00000014755	-	82	35.766	Anabas_testudineus
ENSCSAVG00000007589	-	100	45.804	ENSCSAG00000001938	ZNF845	87	41.997	Chlorocebus_sabaeus
ENSCSAVG00000007589	-	100	42.708	ENSCANG00000038794	ZNF845	94	40.796	Colobus_angolensis_palliatus
ENSCSAVG00000007589	-	100	42.458	ENSCGRG00001024630	-	87	42.458	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007589	-	100	44.603	ENSEBUG00000008988	ZNF845	99	43.478	Eptatretus_burgeri
ENSCSAVG00000007589	-	100	46.041	ENSEBUG00000012628	ZNF845	87	43.509	Eptatretus_burgeri
ENSCSAVG00000007589	-	100	44.014	ENSEBUG00000007308	ZNF845	96	42.236	Eptatretus_burgeri
ENSCSAVG00000007589	-	100	43.725	ENSEBUG00000008852	ZNF845	77	44.510	Eptatretus_burgeri
ENSCSAVG00000007589	-	100	33.432	ENSFHEG00000004454	-	95	33.432	Fundulus_heteroclitus
ENSCSAVG00000007589	-	99	34.167	ENSHBUG00000009720	-	64	32.584	Haplochromis_burtoni
ENSCSAVG00000007589	-	100	43.338	ENSMLEG00000044333	ZNF845	88	42.710	Mandrillus_leucophaeus
ENSCSAVG00000007589	-	100	35.000	ENSMAMG00000018536	-	66	33.333	Mastacembelus_armatus
ENSCSAVG00000007589	-	100	36.889	ENSMZEG00005020085	-	96	35.652	Maylandia_zebra
ENSCSAVG00000007589	-	100	45.513	ENSMAUG00000014247	-	93	43.728	Mesocricetus_auratus
ENSCSAVG00000007589	-	100	42.580	ENSMOCG00000002167	Zfp712	94	42.520	Microtus_ochrogaster
ENSCSAVG00000007589	-	100	35.593	ENSMALG00000013321	-	80	34.043	Monopterus_albus
ENSCSAVG00000007589	-	100	42.720	MGP_CAROLIEiJ_G0018661	Zfp759	90	42.720	Mus_caroli
ENSCSAVG00000007589	-	100	41.444	ENSMUSG00000095432	Zfp748	94	40.724	Mus_musculus
ENSCSAVG00000007589	-	100	43.333	ENSMUSG00000057396	Zfp759	90	43.333	Mus_musculus
ENSCSAVG00000007589	-	100	41.444	MGP_PahariEiJ_G0015756	Zfp748	97	40.573	Mus_pahari
ENSCSAVG00000007589	-	100	41.946	MGP_PahariEiJ_G0015741	Zfp759	89	41.760	Mus_pahari
ENSCSAVG00000007589	-	100	41.444	MGP_SPRETEiJ_G0019560	Zfp748	94	40.573	Mus_spretus
ENSCSAVG00000007589	-	100	43.333	MGP_SPRETEiJ_G0019544	Zfp759	90	42.880	Mus_spretus
ENSCSAVG00000007589	-	100	43.299	ENSNLEG00000006172	ZNF845	92	41.039	Nomascus_leucogenys
ENSCSAVG00000007589	-	100	31.761	ENSORLG00000028851	-	69	31.105	Oryzias_latipes
ENSCSAVG00000007589	-	99	34.074	ENSOMEG00000010300	-	91	32.237	Oryzias_melastigma
ENSCSAVG00000007589	-	100	40.840	ENSOGAG00000029343	-	83	40.840	Otolemur_garnettii
ENSCSAVG00000007589	-	100	45.105	ENSPTRG00000050668	ZNF845	88	43.004	Pan_troglodytes
ENSCSAVG00000007589	-	100	43.816	ENSPEMG00000021548	Zfp712	89	46.341	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007589	-	100	42.254	ENSPEMG00000020934	-	88	42.254	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007589	-	100	33.670	ENSPFOG00000010474	-	100	33.333	Poecilia_formosa
ENSCSAVG00000007589	-	100	34.459	ENSPLAG00000017843	-	94	33.121	Poecilia_latipinna
ENSCSAVG00000007589	-	99	34.234	ENSPMEG00000017809	-	61	34.234	Poecilia_mexicana
ENSCSAVG00000007589	-	99	34.167	ENSPNYG00000021795	-	62	34.167	Pundamilia_nyererei
ENSCSAVG00000007589	-	100	43.890	ENSRNOG00000049259	LOC102549842	94	43.890	Rattus_norvegicus
ENSCSAVG00000007589	-	100	42.496	ENSRBIG00000035402	-	88	42.128	Rhinopithecus_bieti
ENSCSAVG00000007589	-	100	42.766	ENSSBOG00000028573	-	84	42.766	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007589	-	99	35.714	ENSSDUG00000010305	-	58	35.714	Seriola_dumerili
ENSCSAVG00000007589	-	99	35.537	ENSSPAG00000010470	-	72	35.537	Stegastes_partitus