EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007612 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 9365 bases
Position: chrreftig_11:663904-673268
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012964	RRM_1	PF00076.22	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013112	-	794	-	ENSCSAVP00000012963	252 (aa)	-	H2Z5V1
ENSCSAVT00000013113	-	2877	-	ENSCSAVP00000012964	959 (aa)	-	H2Z5V2

Gene Model

Click here to download ENSCSAVG00000007612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007612	-	96	45.503	ENSAPOG00000017220	MARF1	54	45.503	Acanthochromis_polyacanthus
ENSCSAVG00000007612	-	95	46.032	ENSAOCG00000004791	MARF1	54	46.032	Amphiprion_ocellaris
ENSCSAVG00000007612	-	95	46.032	ENSAPEG00000018444	MARF1	54	46.032	Amphiprion_percula
ENSCSAVG00000007612	-	97	44.059	ENSCAFG00000018732	MARF1	57	44.059	Canis_familiaris
ENSCSAVG00000007612	-	97	44.059	ENSCAFG00020023915	MARF1	57	44.059	Canis_lupus_dingo
ENSCSAVG00000007612	-	96	43.564	ENSCCAG00000037176	MARF1	56	43.564	Cebus_capucinus
ENSCSAVG00000007612	-	94	49.704	ENSCPBG00000020303	MARF1	54	49.704	Chrysemys_picta_bellii
ENSCSAVG00000007612	-	95	48.521	ENSFALG00000014058	MARF1	52	48.521	Ficedula_albicollis
ENSCSAVG00000007612	-	96	46.995	ENSGACG00000019162	MARF1	66	45.641	Gasterosteus_aculeatus
ENSCSAVG00000007612	-	94	49.704	ENSGAGG00000016091	MARF1	56	49.704	Gopherus_agassizii
ENSCSAVG00000007612	-	95	49.704	ENSLAFG00000017524	MARF1	57	44.554	Loxodonta_africana
ENSCSAVG00000007612	-	100	30.932	ENSMICG00000014803	MARF1	63	30.703	Microcebus_murinus
ENSCSAVG00000007612	-	84	59.551	ENSMALG00000002637	MARF1	51	59.551	Monopterus_albus
ENSCSAVG00000007612	-	95	49.704	ENSMLUG00000004374	MARF1	55	49.704	Myotis_lucifugus
ENSCSAVG00000007612	-	98	44.554	ENSNGAG00000013574	Marf1	58	44.554	Nannospalax_galili
ENSCSAVG00000007612	-	96	48.521	ENSOANG00000005140	-	55	48.521	Ornithorhynchus_anatinus
ENSCSAVG00000007612	-	96	45.771	ENSOMEG00000009656	MARF1	55	45.771	Oryzias_melastigma
ENSCSAVG00000007612	-	84	43.284	ENSPSIG00000012055	MARF1	68	43.284	Pelodiscus_sinensis
ENSCSAVG00000007612	-	94	47.619	ENSPMEG00000016531	MARF1	61	47.619	Poecilia_mexicana
ENSCSAVG00000007612	-	100	45.050	ENSRNOG00000056248	Marf1	59	45.050	Rattus_norvegicus
ENSCSAVG00000007612	-	100	45.050	ENSRNOG00000002314	LOC103689943	66	45.050	Rattus_norvegicus
ENSCSAVG00000007612	-	85	60.674	ENSSBOG00000024907	MARF1	54	60.674	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007612	-	100	30.863	ENSSMAG00000007684	MARF1	62	30.726	Scophthalmus_maximus
ENSCSAVG00000007612	-	100	31.196	ENSSPUG00000007333	MARF1	63	30.998	Sphenodon_punctatus
ENSCSAVG00000007612	-	97	45.078	ENSTGUG00000005331	MARF1	56	45.078	Taeniopygia_guttata
ENSCSAVG00000007612	-	97	45.050	ENSTTRG00000010245	MARF1	58	45.050	Tursiops_truncatus
ENSCSAVG00000007612	-	97	44.059	ENSVVUG00000019577	MARF1	56	44.059	Vulpes_vulpes
ENSCSAVG00000007612	-	95	47.514	ENSXETG00000005529	marf1	56	49.704	Xenopus_tropicalis