EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007620 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1103 bases
Position: chrreftig_76:1753924-1755026
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000012975	MMR_HSR1	PF01926.23	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013124	-	1103	-	ENSCSAVP00000012975	184 (aa)	-	H2Z5W3

Gene Model

Click here to download ENSCSAVG00000007620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007620	-	98	34.392	ENSCSAVG00000010686	-	81	33.333
ENSCSAVG00000007620	-	97	56.983	ENSCSAVG00000007011	-	98	56.983
ENSCSAVG00000007620	-	95	55.747	ENSCSAVG00000007010	-	96	55.747
ENSCSAVG00000007620	-	89	47.853	ENSCSAVG00000008290	-	85	47.853
ENSCSAVG00000007620	-	90	35.329	ENSCSAVG00000008336	-	90	36.601
ENSCSAVG00000007620	-	90	37.572	ENSCSAVG00000000015	-	91	37.572
ENSCSAVG00000007620	-	96	50.282	ENSCSAVG00000000059	-	100	50.282
ENSCSAVG00000007620	-	90	47.904	ENSCSAVG00000000504	-	90	47.904
ENSCSAVG00000007620	-	68	30.303	ENSCSAVG00000008995	-	81	30.303
ENSCSAVG00000007620	-	96	52.514	ENSCSAVG00000001959	-	98	52.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007620	-	90	77.576	ENSG00000120805	ARL1	99	78.395	Homo_sapiens
ENSCSAVG00000007620	-	98	80.000	ENSAPOG00000002469	arl1	99	80.000	Acanthochromis_polyacanthus
ENSCSAVG00000007620	-	90	76.970	ENSAMEG00000016452	ARL1	99	77.654	Ailuropoda_melanoleuca
ENSCSAVG00000007620	-	97	77.528	ENSACIG00000007953	arl1	99	77.528	Amphilophus_citrinellus
ENSCSAVG00000007620	-	98	80.000	ENSAOCG00000013008	arl1	99	80.000	Amphiprion_ocellaris
ENSCSAVG00000007620	-	98	80.000	ENSAPEG00000013187	arl1	99	80.000	Amphiprion_percula
ENSCSAVG00000007620	-	97	79.775	ENSATEG00000005559	arl1	96	79.775	Anabas_testudineus
ENSCSAVG00000007620	-	98	79.444	ENSAPLG00000016092	ARL1	99	79.444	Anas_platyrhynchos
ENSCSAVG00000007620	-	98	78.889	ENSACAG00000011602	ARL1	99	78.889	Anolis_carolinensis
ENSCSAVG00000007620	-	90	77.576	ENSANAG00000023491	ARL1	99	78.333	Aotus_nancymaae
ENSCSAVG00000007620	-	98	80.000	ENSACLG00000008188	arl1	99	80.000	Astatotilapia_calliptera
ENSCSAVG00000007620	-	98	79.444	ENSAMXG00000021056	arl1	99	79.444	Astyanax_mexicanus
ENSCSAVG00000007620	-	90	77.576	ENSBTAG00000011883	ARL1	99	78.333	Bos_taurus
ENSCSAVG00000007620	-	98	72.222	WBGene00000187	arl-1	99	72.222	Caenorhabditis_elegans
ENSCSAVG00000007620	-	90	77.576	ENSCJAG00000001966	ARL1	99	78.333	Callithrix_jacchus
ENSCSAVG00000007620	-	90	77.576	ENSCAFG00000006992	ARL1	99	78.333	Canis_familiaris
ENSCSAVG00000007620	-	90	77.576	ENSCAFG00020024333	ARL1	99	78.333	Canis_lupus_dingo
ENSCSAVG00000007620	-	92	77.515	ENSCHIG00000024524	ARL1	99	77.515	Capra_hircus
ENSCSAVG00000007620	-	91	77.246	ENSTSYG00000013257	-	99	78.090	Carlito_syrichta
ENSCSAVG00000007620	-	74	82.482	ENSCAPG00000001010	ARL1	99	82.482	Cavia_aperea
ENSCSAVG00000007620	-	90	77.576	ENSCPOG00000026014	ARL1	99	78.333	Cavia_porcellus
ENSCSAVG00000007620	-	90	77.576	ENSCCAG00000025938	ARL1	99	78.333	Cebus_capucinus
ENSCSAVG00000007620	-	90	76.970	ENSCLAG00000008180	ARL1	99	77.222	Chinchilla_lanigera
ENSCSAVG00000007620	-	90	77.576	ENSCSAG00000003368	ARL1	99	78.333	Chlorocebus_sabaeus
ENSCSAVG00000007620	-	98	79.444	ENSCPBG00000004906	ARL1	99	79.444	Chrysemys_picta_bellii
ENSCSAVG00000007620	-	98	95.000	ENSCING00000019794	-	100	95.000	Ciona_intestinalis
ENSCSAVG00000007620	-	87	41.358	ENSCING00000004577	-	93	41.358	Ciona_intestinalis
ENSCSAVG00000007620	-	90	78.182	ENSCANG00000033548	ARL1	99	78.889	Colobus_angolensis_palliatus
ENSCSAVG00000007620	-	90	77.576	ENSCGRG00001010446	Arl1	99	78.333	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007620	-	90	76.970	ENSCGRG00000009856	Arl1	92	76.087	Cricetulus_griseus_crigri
ENSCSAVG00000007620	-	98	80.556	ENSCVAG00000001731	arl1	99	80.556	Cyprinodon_variegatus
ENSCSAVG00000007620	-	98	79.444	ENSDARG00000101680	arl1	100	81.871	Danio_rerio
ENSCSAVG00000007620	-	90	77.576	ENSDORG00000014770	Arl1	94	77.778	Dipodomys_ordii
ENSCSAVG00000007620	-	98	72.778	FBgn0000115	Arl1	99	72.778	Drosophila_melanogaster
ENSCSAVG00000007620	-	92	78.824	ENSETEG00000020310	ARL1	96	78.824	Echinops_telfairi
ENSCSAVG00000007620	-	90	77.576	ENSEASG00005020057	ARL1	99	78.333	Equus_asinus_asinus
ENSCSAVG00000007620	-	96	75.978	ENSECAG00000000372	ARL1	99	78.333	Equus_caballus
ENSCSAVG00000007620	-	98	79.444	ENSELUG00000018440	arl1	99	79.444	Esox_lucius
ENSCSAVG00000007620	-	97	79.888	ENSELUG00000001287	-	99	79.888	Esox_lucius
ENSCSAVG00000007620	-	90	77.576	ENSFCAG00000030871	ARL1	99	78.333	Felis_catus
ENSCSAVG00000007620	-	98	80.000	ENSFALG00000011156	ARL1	99	80.000	Ficedula_albicollis
ENSCSAVG00000007620	-	90	77.576	ENSFDAG00000016393	ARL1	99	77.778	Fukomys_damarensis
ENSCSAVG00000007620	-	97	80.337	ENSFHEG00000004171	arl1	94	80.337	Fundulus_heteroclitus
ENSCSAVG00000007620	-	98	79.444	ENSGMOG00000006859	arl1	99	79.444	Gadus_morhua
ENSCSAVG00000007620	-	98	80.000	ENSGALG00000011651	ARL1	99	80.000	Gallus_gallus
ENSCSAVG00000007620	-	90	82.424	ENSGAFG00000006973	arl1	99	82.424	Gambusia_affinis
ENSCSAVG00000007620	-	98	78.333	ENSGACG00000019098	arl1	99	78.333	Gasterosteus_aculeatus
ENSCSAVG00000007620	-	90	77.576	ENSGGOG00000010788	ARL1	99	78.333	Gorilla_gorilla
ENSCSAVG00000007620	-	98	80.000	ENSHBUG00000010636	arl1	99	80.000	Haplochromis_burtoni
ENSCSAVG00000007620	-	90	77.576	ENSHGLG00000004909	ARL1	99	78.333	Heterocephalus_glaber_female
ENSCSAVG00000007620	-	90	77.576	ENSHGLG00100001832	ARL1	99	77.778	Heterocephalus_glaber_male
ENSCSAVG00000007620	-	98	79.444	ENSHCOG00000005566	arl1	99	79.444	Hippocampus_comes
ENSCSAVG00000007620	-	97	79.213	ENSIPUG00000013834	arl1	96	79.213	Ictalurus_punctatus
ENSCSAVG00000007620	-	90	77.576	ENSSTOG00000016022	ARL1	99	78.333	Ictidomys_tridecemlineatus
ENSCSAVG00000007620	-	90	72.121	ENSJJAG00000000452	-	99	72.222	Jaculus_jaculus
ENSCSAVG00000007620	-	84	83.766	ENSKMAG00000005931	arl1	83	83.766	Kryptolebias_marmoratus
ENSCSAVG00000007620	-	94	78.613	ENSLBEG00000000991	arl1	99	78.613	Labrus_bergylta
ENSCSAVG00000007620	-	90	77.576	ENSLAFG00000026143	ARL1	94	78.333	Loxodonta_africana
ENSCSAVG00000007620	-	90	77.576	ENSMFAG00000035725	ARL1	99	78.333	Macaca_fascicularis
ENSCSAVG00000007620	-	90	77.576	ENSMMUG00000031610	ARL1	99	77.778	Macaca_mulatta
ENSCSAVG00000007620	-	90	77.576	ENSMNEG00000007067	ARL1	99	78.333	Macaca_nemestrina
ENSCSAVG00000007620	-	88	78.395	ENSMLEG00000036143	ARL1	99	78.395	Mandrillus_leucophaeus
ENSCSAVG00000007620	-	97	78.090	ENSMAMG00000001968	arl1	99	78.090	Mastacembelus_armatus
ENSCSAVG00000007620	-	98	80.000	ENSMZEG00005018136	arl1	99	80.000	Maylandia_zebra
ENSCSAVG00000007620	-	98	79.444	ENSMGAG00000011748	ARL1	99	79.444	Meleagris_gallopavo
ENSCSAVG00000007620	-	90	77.576	ENSMAUG00000021923	Arl1	99	78.333	Mesocricetus_auratus
ENSCSAVG00000007620	-	90	77.576	ENSMICG00000015801	ARL1	99	78.333	Microcebus_murinus
ENSCSAVG00000007620	-	90	77.576	ENSMOCG00000005852	Arl1	99	78.333	Microtus_ochrogaster
ENSCSAVG00000007620	-	95	79.310	ENSMMOG00000003353	arl1	69	79.310	Mola_mola
ENSCSAVG00000007620	-	98	78.333	ENSMODG00000003056	ARL1	99	78.333	Monodelphis_domestica
ENSCSAVG00000007620	-	97	78.090	ENSMALG00000003003	arl1	99	81.707	Monopterus_albus
ENSCSAVG00000007620	-	90	77.576	MGP_CAROLIEiJ_G0015712	Arl1	99	78.333	Mus_caroli
ENSCSAVG00000007620	-	90	77.576	ENSMUSG00000060904	Arl1	99	82.482	Mus_musculus
ENSCSAVG00000007620	-	90	77.576	MGP_PahariEiJ_G0031373	Arl1	99	78.333	Mus_pahari
ENSCSAVG00000007620	-	90	77.576	MGP_SPRETEiJ_G0016530	Arl1	99	78.333	Mus_spretus
ENSCSAVG00000007620	-	90	77.108	ENSMPUG00000011822	ARL1	99	77.778	Mustela_putorius_furo
ENSCSAVG00000007620	-	89	75.610	ENSMLUG00000025321	-	99	76.111	Myotis_lucifugus
ENSCSAVG00000007620	-	85	80.255	ENSMLUG00000002351	-	100	80.233	Myotis_lucifugus
ENSCSAVG00000007620	-	74	82.482	ENSNGAG00000007879	-	99	82.482	Nannospalax_galili
ENSCSAVG00000007620	-	98	80.000	ENSNBRG00000019783	arl1	99	80.000	Neolamprologus_brichardi
ENSCSAVG00000007620	-	88	78.395	ENSNLEG00000006223	ARL1	99	78.395	Nomascus_leucogenys
ENSCSAVG00000007620	-	98	78.333	ENSMEUG00000015525	ARL1	95	78.333	Notamacropus_eugenii
ENSCSAVG00000007620	-	88	77.640	ENSODEG00000019880	-	99	77.222	Octodon_degus
ENSCSAVG00000007620	-	90	77.576	ENSODEG00000010531	-	99	78.212	Octodon_degus
ENSCSAVG00000007620	-	90	77.576	ENSODEG00000019783	-	99	78.333	Octodon_degus
ENSCSAVG00000007620	-	98	80.000	ENSONIG00000009921	arl1	99	80.000	Oreochromis_niloticus
ENSCSAVG00000007620	-	90	77.576	ENSOCUG00000002217	ARL1	95	78.333	Oryctolagus_cuniculus
ENSCSAVG00000007620	-	90	81.928	ENSORLG00000008909	arl1	98	81.928	Oryzias_latipes
ENSCSAVG00000007620	-	98	80.000	ENSORLG00020005754	arl1	99	80.000	Oryzias_latipes_hni
ENSCSAVG00000007620	-	98	80.000	ENSORLG00015002736	arl1	97	82.424	Oryzias_latipes_hsok
ENSCSAVG00000007620	-	94	79.769	ENSOMEG00000023497	arl1	93	79.769	Oryzias_melastigma
ENSCSAVG00000007620	-	90	77.576	ENSOGAG00000015144	ARL1	99	78.333	Otolemur_garnettii
ENSCSAVG00000007620	-	90	77.576	ENSOARG00000015007	ARL1	99	78.333	Ovis_aries
ENSCSAVG00000007620	-	90	77.576	ENSPPAG00000034860	ARL1	99	78.333	Pan_paniscus
ENSCSAVG00000007620	-	90	77.576	ENSPPRG00000023908	ARL1	99	78.333	Panthera_pardus
ENSCSAVG00000007620	-	91	77.246	ENSPTIG00000002154	-	99	78.090	Panthera_tigris_altaica
ENSCSAVG00000007620	-	90	77.576	ENSPTRG00000005350	ARL1	99	78.333	Pan_troglodytes
ENSCSAVG00000007620	-	97	74.176	ENSPANG00000018816	ARL1	96	78.090	Papio_anubis
ENSCSAVG00000007620	-	98	79.444	ENSPKIG00000007118	arl1	99	80.864	Paramormyrops_kingsleyae
ENSCSAVG00000007620	-	98	78.889	ENSPSIG00000006539	ARL1	99	78.889	Pelodiscus_sinensis
ENSCSAVG00000007620	-	90	81.818	ENSPMGG00000004070	arl1	98	81.818	Periophthalmus_magnuspinnatus
ENSCSAVG00000007620	-	90	77.576	ENSPEMG00000008781	Arl1	99	78.333	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007620	-	98	78.889	ENSPMAG00000002070	arl1	99	78.889	Petromyzon_marinus
ENSCSAVG00000007620	-	97	78.212	ENSPCIG00000009683	-	96	78.212	Phascolarctos_cinereus
ENSCSAVG00000007620	-	98	80.556	ENSPFOG00000003241	arl1	99	80.556	Poecilia_formosa
ENSCSAVG00000007620	-	98	80.556	ENSPLAG00000012898	arl1	99	80.556	Poecilia_latipinna
ENSCSAVG00000007620	-	99	79.121	ENSPMEG00000005938	arl1	97	79.121	Poecilia_mexicana
ENSCSAVG00000007620	-	99	79.121	ENSPREG00000013361	arl1	97	79.121	Poecilia_reticulata
ENSCSAVG00000007620	-	90	77.576	ENSPPYG00000004872	ARL1	99	78.333	Pongo_abelii
ENSCSAVG00000007620	-	98	75.556	ENSPCOG00000015554	-	99	75.556	Propithecus_coquereli
ENSCSAVG00000007620	-	90	77.576	ENSPVAG00000008119	ARL1	94	78.333	Pteropus_vampyrus
ENSCSAVG00000007620	-	98	80.000	ENSPNYG00000011671	arl1	99	80.000	Pundamilia_nyererei
ENSCSAVG00000007620	-	90	81.818	ENSPNAG00000028795	arl1	99	81.818	Pygocentrus_nattereri
ENSCSAVG00000007620	-	90	77.576	ENSRNOG00000005763	Arl1	99	78.333	Rattus_norvegicus
ENSCSAVG00000007620	-	90	77.576	ENSRBIG00000042560	ARL1	99	78.333	Rhinopithecus_bieti
ENSCSAVG00000007620	-	90	77.576	ENSRROG00000037996	ARL1	99	78.333	Rhinopithecus_roxellana
ENSCSAVG00000007620	-	90	77.576	ENSSBOG00000024352	-	99	78.333	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007620	-	98	77.778	ENSSHAG00000004634	ARL1	99	77.778	Sarcophilus_harrisii
ENSCSAVG00000007620	-	98	79.444	ENSSFOG00015001665	arl1	99	79.444	Scleropages_formosus
ENSCSAVG00000007620	-	98	80.556	ENSSMAG00000016416	arl1	99	80.556	Scophthalmus_maximus
ENSCSAVG00000007620	-	95	79.429	ENSSDUG00000013898	arl1	99	79.429	Seriola_dumerili
ENSCSAVG00000007620	-	98	80.000	ENSSLDG00000012946	arl1	99	80.000	Seriola_lalandi_dorsalis
ENSCSAVG00000007620	-	91	76.048	ENSSARG00000013944	ARL1	99	76.966	Sorex_araneus
ENSCSAVG00000007620	-	98	78.889	ENSSPUG00000004578	ARL1	99	78.889	Sphenodon_punctatus
ENSCSAVG00000007620	-	98	80.000	ENSSPAG00000014633	arl1	99	80.000	Stegastes_partitus
ENSCSAVG00000007620	-	90	77.576	ENSSSCG00000000870	ARL1	99	78.333	Sus_scrofa
ENSCSAVG00000007620	-	97	79.775	ENSTGUG00000009085	-	99	79.775	Taeniopygia_guttata
ENSCSAVG00000007620	-	98	79.444	ENSTRUG00000006254	arl1	99	79.444	Takifugu_rubripes
ENSCSAVG00000007620	-	98	78.889	ENSTNIG00000006920	arl1	99	78.889	Tetraodon_nigroviridis
ENSCSAVG00000007620	-	86	79.245	ENSTBEG00000015546	ARL1	96	79.885	Tupaia_belangeri
ENSCSAVG00000007620	-	90	77.576	ENSTTRG00000017202	ARL1	94	78.333	Tursiops_truncatus
ENSCSAVG00000007620	-	90	77.576	ENSUMAG00000019547	ARL1	99	78.333	Ursus_maritimus
ENSCSAVG00000007620	-	90	77.576	ENSVPAG00000011621	ARL1	94	78.333	Vicugna_pacos
ENSCSAVG00000007620	-	90	77.576	ENSVVUG00000018044	ARL1	99	78.333	Vulpes_vulpes
ENSCSAVG00000007620	-	90	78.788	ENSXETG00000002540	arl1	99	79.444	Xenopus_tropicalis
ENSCSAVG00000007620	-	97	78.652	ENSXMAG00000028338	arl1	96	85.714	Xiphophorus_maculatus