EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007638 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2874 bases
Position: chrreftig_17:1330543-1333416
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013006	PIN_4	PF13638.6	2.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013155	-	894	-	ENSCSAVP00000013006	264 (aa)	-	H2Z5Z4

Gene Model

Click here to download ENSCSAVG00000007638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007638	-	99	37.943	ENSG00000070366	SMG6	54	37.456	Homo_sapiens
ENSCSAVG00000007638	-	99	37.589	ENSTSYG00000003406	SMG6	54	37.456	Carlito_syrichta
ENSCSAVG00000007638	-	98	76.806	ENSCING00000010099	-	53	76.806	Ciona_intestinalis
ENSCSAVG00000007638	-	99	37.943	ENSCANG00000031764	SMG6	54	37.456	Colobus_angolensis_palliatus
ENSCSAVG00000007638	-	99	37.857	ENSLACG00000003276	SMG6	83	43.931	Latimeria_chalumnae
ENSCSAVG00000007638	-	98	37.634	ENSMGAG00000017200	-	75	37.634	Meleagris_gallopavo
ENSCSAVG00000007638	-	94	30.909	ENSMODG00000024463	-	61	30.909	Monodelphis_domestica
ENSCSAVG00000007638	-	99	37.943	ENSNLEG00000017171	SMG6	54	37.456	Nomascus_leucogenys
ENSCSAVG00000007638	-	87	35.124	ENSOANG00000030166	-	72	35.124	Ornithorhynchus_anatinus
ENSCSAVG00000007638	-	99	37.589	ENSPTIG00000008925	SMG6	54	37.456	Panthera_tigris_altaica
ENSCSAVG00000007638	-	99	37.943	ENSPTRG00000008544	SMG6	54	37.456	Pan_troglodytes
ENSCSAVG00000007638	-	99	38.078	ENSRROG00000030423	SMG6	54	37.809	Rhinopithecus_roxellana