EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007813 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 786 bases
Position: chrreftig_25:900342-901127
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013310	MMR_HSR1	PF01926.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013460	-	786	-	ENSCSAVP00000013310	262 (aa)	-	H2Z6U8

Gene Model

Click here to download ENSCSAVG00000007813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007813's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007813	-	63	35.366	ENSCSAVG00000010245	-	57	35.366
ENSCSAVG00000007813	-	63	32.335	ENSCSAVG00000000613	-	88	32.335
ENSCSAVG00000007813	-	61	37.267	ENSCSAVG00000002088	-	74	37.267
ENSCSAVG00000007813	-	81	34.112	ENSCSAVG00000005689	-	97	34.112
ENSCSAVG00000007813	-	62	38.415	ENSCSAVG00000000160	-	74	38.415
ENSCSAVG00000007813	-	65	37.572	ENSCSAVG00000011162	-	83	37.572
ENSCSAVG00000007813	-	79	30.332	ENSCSAVG00000008684	-	95	30.332
ENSCSAVG00000007813	-	61	36.646	ENSCSAVG00000001356	-	65	36.646
ENSCSAVG00000007813	-	63	36.747	ENSCSAVG00000010348	-	81	36.747
ENSCSAVG00000007813	-	61	37.888	ENSCSAVG00000009147	-	77	37.888
ENSCSAVG00000007813	-	60	39.490	ENSCSAVG00000008995	-	96	39.490
ENSCSAVG00000007813	-	63	31.098	ENSCSAVG00000005120	-	72	31.638
ENSCSAVG00000007813	-	63	37.952	ENSCSAVG00000009128	-	78	37.952
ENSCSAVG00000007813	-	79	31.481	ENSCSAVG00000002804	-	93	31.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007813	-	97	48.450	ENSG00000100228	RAB36	86	52.632	Homo_sapiens
ENSCSAVG00000007813	-	97	45.946	ENSAPOG00000022911	rab36	95	45.946	Acanthochromis_polyacanthus
ENSCSAVG00000007813	-	97	48.450	ENSAMEG00000008955	RAB36	80	48.450	Ailuropoda_melanoleuca
ENSCSAVG00000007813	-	96	44.141	ENSACIG00000000642	rab36	95	44.141	Amphilophus_citrinellus
ENSCSAVG00000007813	-	97	46.332	ENSAOCG00000018241	rab36	95	46.332	Amphiprion_ocellaris
ENSCSAVG00000007813	-	97	45.946	ENSAPEG00000011251	rab36	98	45.946	Amphiprion_percula
ENSCSAVG00000007813	-	97	45.174	ENSATEG00000003390	rab36	98	45.174	Anabas_testudineus
ENSCSAVG00000007813	-	98	48.659	ENSAPLG00000008936	RAB36	97	48.659	Anas_platyrhynchos
ENSCSAVG00000007813	-	97	48.837	ENSANAG00000025225	RAB36	87	48.837	Aotus_nancymaae
ENSCSAVG00000007813	-	97	47.490	ENSAMXG00000017266	rab36	98	47.490	Astyanax_mexicanus
ENSCSAVG00000007813	-	83	52.036	ENSBTAG00000017277	RAB36	67	52.036	Bos_taurus
ENSCSAVG00000007813	-	97	48.837	ENSCJAG00000009762	RAB36	96	48.837	Callithrix_jacchus
ENSCSAVG00000007813	-	97	49.225	ENSCAFG00000013676	RAB36	87	49.225	Canis_familiaris
ENSCSAVG00000007813	-	97	49.225	ENSCAFG00020004759	RAB36	77	49.225	Canis_lupus_dingo
ENSCSAVG00000007813	-	89	50.427	ENSCHIG00000021370	RAB36	87	50.427	Capra_hircus
ENSCSAVG00000007813	-	97	48.450	ENSCCAG00000028830	RAB36	77	48.450	Cebus_capucinus
ENSCSAVG00000007813	-	97	49.225	ENSCATG00000003875	RAB36	77	49.225	Cercocebus_atys
ENSCSAVG00000007813	-	97	48.837	ENSCSAG00000014082	RAB36	96	48.837	Chlorocebus_sabaeus
ENSCSAVG00000007813	-	97	50.965	ENSCPBG00000002289	RAB36	82	50.965	Chrysemys_picta_bellii
ENSCSAVG00000007813	-	99	82.375	ENSCING00000022926	-	98	82.375	Ciona_intestinalis
ENSCSAVG00000007813	-	94	47.581	ENSCANG00000030432	RAB36	81	47.581	Colobus_angolensis_palliatus
ENSCSAVG00000007813	-	89	52.564	ENSCGRG00001015715	Rab36	87	52.564	Cricetulus_griseus_chok1gshd
ENSCSAVG00000007813	-	89	52.564	ENSCGRG00000013186	Rab36	87	52.564	Cricetulus_griseus_crigri
ENSCSAVG00000007813	-	97	46.332	ENSDARG00000014058	rab36	98	46.332	Danio_rerio
ENSCSAVG00000007813	-	97	49.225	ENSDNOG00000039895	RAB36	91	49.225	Dasypus_novemcinctus
ENSCSAVG00000007813	-	97	48.837	ENSDORG00000005225	Rab36	76	48.837	Dipodomys_ordii
ENSCSAVG00000007813	-	85	45.778	FBgn0035255	RabX5	80	45.778	Drosophila_melanogaster
ENSCSAVG00000007813	-	97	50.980	ENSEBUG00000008934	rab36	96	50.980	Eptatretus_burgeri
ENSCSAVG00000007813	-	97	49.615	ENSEASG00005019924	RAB36	82	49.615	Equus_asinus_asinus
ENSCSAVG00000007813	-	97	49.612	ENSECAG00000011912	RAB36	96	49.612	Equus_caballus
ENSCSAVG00000007813	-	98	49.425	ENSELUG00000018921	rab36	98	49.425	Esox_lucius
ENSCSAVG00000007813	-	97	47.674	ENSFCAG00000002048	RAB36	79	47.674	Felis_catus
ENSCSAVG00000007813	-	98	49.049	ENSFALG00000007362	RAB36	97	49.049	Ficedula_albicollis
ENSCSAVG00000007813	-	97	48.837	ENSFDAG00000013013	RAB36	96	48.837	Fukomys_damarensis
ENSCSAVG00000007813	-	97	44.828	ENSFHEG00000006551	rab36	95	44.828	Fundulus_heteroclitus
ENSCSAVG00000007813	-	71	55.135	ENSGMOG00000014481	rab36	97	55.135	Gadus_morhua
ENSCSAVG00000007813	-	98	49.042	ENSGALG00000006710	RAB36	97	49.042	Gallus_gallus
ENSCSAVG00000007813	-	98	45.385	ENSGAFG00000015135	rab36	97	45.385	Gambusia_affinis
ENSCSAVG00000007813	-	98	44.231	ENSGACG00000014678	rab36	97	44.231	Gasterosteus_aculeatus
ENSCSAVG00000007813	-	97	50.579	ENSGAGG00000025340	RAB36	96	50.579	Gopherus_agassizii
ENSCSAVG00000007813	-	97	48.837	ENSGGOG00000016408	RAB36	77	48.837	Gorilla_gorilla
ENSCSAVG00000007813	-	97	48.062	ENSHGLG00000009476	RAB36	96	48.062	Heterocephalus_glaber_female
ENSCSAVG00000007813	-	97	48.062	ENSHGLG00100015609	RAB36	96	48.062	Heterocephalus_glaber_male
ENSCSAVG00000007813	-	97	47.308	ENSIPUG00000022673	rab36	98	46.923	Ictalurus_punctatus
ENSCSAVG00000007813	-	97	48.837	ENSSTOG00000008444	RAB36	96	48.837	Ictidomys_tridecemlineatus
ENSCSAVG00000007813	-	81	52.941	ENSJJAG00000011100	Rab36	90	52.941	Jaculus_jaculus
ENSCSAVG00000007813	-	97	50.775	ENSLACG00000017799	RAB36	96	50.775	Latimeria_chalumnae
ENSCSAVG00000007813	-	75	50.251	ENSLOCG00000002825	rab36	86	50.251	Lepisosteus_oculatus
ENSCSAVG00000007813	-	76	50.754	ENSLAFG00000009693	RAB36	74	50.754	Loxodonta_africana
ENSCSAVG00000007813	-	97	48.837	ENSMFAG00000003128	RAB36	77	48.837	Macaca_fascicularis
ENSCSAVG00000007813	-	97	48.837	ENSMMUG00000015204	RAB36	96	48.837	Macaca_mulatta
ENSCSAVG00000007813	-	97	48.837	ENSMNEG00000022250	RAB36	77	48.837	Macaca_nemestrina
ENSCSAVG00000007813	-	97	49.225	ENSMLEG00000034054	RAB36	77	49.225	Mandrillus_leucophaeus
ENSCSAVG00000007813	-	95	47.431	ENSMAMG00000010136	rab36	92	47.431	Mastacembelus_armatus
ENSCSAVG00000007813	-	89	52.564	ENSMAUG00000016039	Rab36	87	52.564	Mesocricetus_auratus
ENSCSAVG00000007813	-	92	49.194	ENSMICG00000015683	RAB36	73	51.282	Microcebus_murinus
ENSCSAVG00000007813	-	89	49.573	ENSMOCG00000004529	Rab36	87	49.573	Microtus_ochrogaster
ENSCSAVG00000007813	-	97	45.946	ENSMALG00000013806	rab36	97	49.378	Monopterus_albus
ENSCSAVG00000007813	-	97	48.062	MGP_CAROLIEiJ_G0015435	Rab36	96	48.062	Mus_caroli
ENSCSAVG00000007813	-	97	47.876	ENSMUSG00000020175	Rab36	96	47.876	Mus_musculus
ENSCSAVG00000007813	-	97	47.287	MGP_PahariEiJ_G0030851	Rab36	96	47.287	Mus_pahari
ENSCSAVG00000007813	-	97	48.450	MGP_SPRETEiJ_G0016248	Rab36	96	48.450	Mus_spretus
ENSCSAVG00000007813	-	97	49.225	ENSMPUG00000002845	RAB36	72	49.225	Mustela_putorius_furo
ENSCSAVG00000007813	-	97	48.450	ENSMLUG00000000298	RAB36	77	48.450	Myotis_lucifugus
ENSCSAVG00000007813	-	97	47.328	ENSNGAG00000016512	Rab36	96	47.328	Nannospalax_galili
ENSCSAVG00000007813	-	97	48.062	ENSNLEG00000028438	RAB36	78	48.062	Nomascus_leucogenys
ENSCSAVG00000007813	-	80	55.238	ENSMEUG00000004574	RAB36	86	55.238	Notamacropus_eugenii
ENSCSAVG00000007813	-	98	49.049	ENSOPRG00000016787	RAB36	81	49.049	Ochotona_princeps
ENSCSAVG00000007813	-	97	49.612	ENSODEG00000009016	RAB36	87	49.612	Octodon_degus
ENSCSAVG00000007813	-	97	49.612	ENSOANG00000000325	-	96	49.612	Ornithorhynchus_anatinus
ENSCSAVG00000007813	-	97	48.062	ENSOCUG00000004914	RAB36	76	48.062	Oryctolagus_cuniculus
ENSCSAVG00000007813	-	96	48.221	ENSOGAG00000000096	RAB36	92	48.221	Otolemur_garnettii
ENSCSAVG00000007813	-	97	48.837	ENSPPAG00000028079	RAB36	77	48.837	Pan_paniscus
ENSCSAVG00000007813	-	97	47.674	ENSPPRG00000014170	RAB36	86	47.674	Panthera_pardus
ENSCSAVG00000007813	-	97	48.062	ENSPTIG00000012204	RAB36	77	48.062	Panthera_tigris_altaica
ENSCSAVG00000007813	-	97	48.837	ENSPTRG00000014136	RAB36	77	48.837	Pan_troglodytes
ENSCSAVG00000007813	-	97	49.225	ENSPANG00000019629	RAB36	77	49.225	Papio_anubis
ENSCSAVG00000007813	-	93	46.000	ENSPKIG00000021975	rab36	97	46.000	Paramormyrops_kingsleyae
ENSCSAVG00000007813	-	98	50.193	ENSPSIG00000009545	RAB36	97	50.193	Pelodiscus_sinensis
ENSCSAVG00000007813	-	91	46.721	ENSPMGG00000018593	rab36	92	46.721	Periophthalmus_magnuspinnatus
ENSCSAVG00000007813	-	97	48.450	ENSPEMG00000023681	Rab36	96	48.450	Peromyscus_maniculatus_bairdii
ENSCSAVG00000007813	-	81	55.399	ENSPMAG00000004657	rab36	88	55.399	Petromyzon_marinus
ENSCSAVG00000007813	-	59	54.140	ENSPMEG00000015292	rab36	87	54.140	Poecilia_mexicana
ENSCSAVG00000007813	-	97	48.450	ENSPPYG00000011619	RAB36	77	48.450	Pongo_abelii
ENSCSAVG00000007813	-	97	42.857	ENSPCAG00000006956	RAB36	78	42.857	Procavia_capensis
ENSCSAVG00000007813	-	95	50.602	ENSPCOG00000027432	RAB36	79	50.602	Propithecus_coquereli
ENSCSAVG00000007813	-	97	48.837	ENSPVAG00000011392	RAB36	77	48.837	Pteropus_vampyrus
ENSCSAVG00000007813	-	89	50.420	ENSPNAG00000021994	rab36	89	50.420	Pygocentrus_nattereri
ENSCSAVG00000007813	-	97	47.104	ENSRNOG00000001311	Rab36	87	50.000	Rattus_norvegicus
ENSCSAVG00000007813	-	97	49.225	ENSRBIG00000035268	RAB36	77	49.225	Rhinopithecus_bieti
ENSCSAVG00000007813	-	97	49.225	ENSRROG00000038157	RAB36	77	49.225	Rhinopithecus_roxellana
ENSCSAVG00000007813	-	97	48.837	ENSSBOG00000019652	RAB36	77	48.837	Saimiri_boliviensis_boliviensis
ENSCSAVG00000007813	-	86	49.780	ENSSFOG00015016156	rab36	87	49.780	Scleropages_formosus
ENSCSAVG00000007813	-	97	46.923	ENSSMAG00000020045	rab36	97	46.923	Scophthalmus_maximus
ENSCSAVG00000007813	-	97	44.788	ENSSDUG00000004119	rab36	84	44.788	Seriola_dumerili
ENSCSAVG00000007813	-	97	47.126	ENSSLDG00000009464	rab36	95	47.126	Seriola_lalandi_dorsalis
ENSCSAVG00000007813	-	98	50.192	ENSSPUG00000014551	RAB36	93	55.814	Sphenodon_punctatus
ENSCSAVG00000007813	-	97	45.174	ENSSPAG00000018203	rab36	98	45.174	Stegastes_partitus
ENSCSAVG00000007813	-	97	48.047	ENSSSCG00000010048	RAB36	96	48.047	Sus_scrofa
ENSCSAVG00000007813	-	83	53.456	ENSTGUG00000009985	-	90	53.456	Taeniopygia_guttata
ENSCSAVG00000007813	-	97	48.837	ENSUAMG00000010975	RAB36	77	48.837	Ursus_americanus
ENSCSAVG00000007813	-	97	48.837	ENSUMAG00000000492	RAB36	86	48.837	Ursus_maritimus
ENSCSAVG00000007813	-	97	46.538	ENSXMAG00000016243	rab36	97	46.538	Xiphophorus_maculatus