EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007814 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2605 bases
Position: chrreftig_13:2278297-2280901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013311	PseudoU_synth_2	PF00849.22	1.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013461	-	1415	-	ENSCSAVP00000013311	423 (aa)	-	H2Z6U9

Gene Model

Click here to download ENSCSAVG00000007814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007814	-	53	45.652	ENSCSAVG00000007812	-	73	45.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007814	-	50	36.493	WBGene00019498	K07E8.7	54	36.493	Caenorhabditis_elegans
ENSCSAVG00000007814	-	53	42.411	ENSCAPG00000006895	-	76	42.411	Cavia_aperea
ENSCSAVG00000007814	-	54	41.304	ENSDORG00000009092	Rpusd2	52	41.304	Dipodomys_ordii
ENSCSAVG00000007814	-	67	39.465	ENSFHEG00000007518	rpusd2	51	39.465	Fundulus_heteroclitus
ENSCSAVG00000007814	-	54	41.739	ENSMLEG00000036551	RPUSD2	53	41.739	Mandrillus_leucophaeus
ENSCSAVG00000007814	-	65	38.732	ENSMOCG00000020061	Rpusd2	50	38.732	Microtus_ochrogaster
ENSCSAVG00000007814	-	53	43.498	ENSPSIG00000012680	RPUSD2	62	43.498	Pelodiscus_sinensis
ENSCSAVG00000007814	-	54	40.435	ENSSHAG00000015108	RPUSD2	59	40.435	Sarcophilus_harrisii