EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000007825 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
25631 bases
Position
chrreftig_13:2370083-2395713
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000013336RRM_4PF10598.98.7e-4811
ENSCSAVP00000013333RRM_4PF10598.91e-4711
ENSCSAVP00000013331RRM_4PF10598.91.2e-4711
ENSCSAVP00000013335RRM_4PF10598.91.2e-4711
ENSCSAVP00000013334RRM_4PF10598.91.2e-4711
ENSCSAVP00000013332RRM_4PF10598.91.2e-4711
ENSCSAVP00000013328RRM_4PF10598.91.3e-4711
ENSCSAVP00000013329RRM_4PF10598.91.3e-4711
ENSCSAVP00000013330RRM_4PF10598.91.3e-4711
ENSCSAVP00000013336U5_2-snRNA_bdgPF10597.95.3e-7411
ENSCSAVP00000013331U5_2-snRNA_bdgPF10597.97.9e-7411
ENSCSAVP00000013335U5_2-snRNA_bdgPF10597.97.9e-7411
ENSCSAVP00000013334U5_2-snRNA_bdgPF10597.98.1e-7411
ENSCSAVP00000013330U5_2-snRNA_bdgPF10597.98.6e-7411
ENSCSAVP00000013329U5_2-snRNA_bdgPF10597.99.5e-7411
ENSCSAVP00000013332U5_2-snRNA_bdgPF10597.91e-7311
ENSCSAVP00000013328U5_2-snRNA_bdgPF10597.91.6e-7311
ENSCSAVP00000013333U5_2-snRNA_bdgPF10597.91.7e-7311
ENSCSAVP00000013335PRO8NTPF08082.111.2e-8711
ENSCSAVP00000013331PRO8NTPF08082.111.2e-8711
ENSCSAVP00000013334PRO8NTPF08082.111.2e-8711
ENSCSAVP00000013328PRO8NTPF08082.111.2e-8711
ENSCSAVP00000013329PRO8NTPF08082.111.2e-8711
ENSCSAVP00000013333PRO8NTPF08082.111.3e-8711
ENSCSAVP00000013330PRO8NTPF08082.111.3e-8711
ENSCSAVP00000013332PRO8NTPF08082.111.4e-8711
ENSCSAVP00000013335U6-snRNA_bdgPF10596.91.9e-8411
ENSCSAVP00000013331U6-snRNA_bdgPF10596.91.9e-8411
ENSCSAVP00000013334U6-snRNA_bdgPF10596.92e-8411
ENSCSAVP00000013329U6-snRNA_bdgPF10596.92e-8411
ENSCSAVP00000013328U6-snRNA_bdgPF10596.92.1e-8411
ENSCSAVP00000013333U6-snRNA_bdgPF10596.92.1e-8411
ENSCSAVP00000013332U6-snRNA_bdgPF10596.92.2e-8411
ENSCSAVP00000013330U6-snRNA_bdgPF10596.91.1e-8211
ENSCSAVP00000013336U6-snRNA_bdgPF10596.94.6e-4212
ENSCSAVP00000013336U6-snRNA_bdgPF10596.94.6e-4222
ENSCSAVP00000013334PROCNPF08083.112.7e-23511
ENSCSAVP00000013329PROCNPF08083.112.8e-23511
ENSCSAVP00000013328PROCNPF08083.112.8e-23511
ENSCSAVP00000013333PROCNPF08083.112.9e-23511
ENSCSAVP00000013330PROCNPF08083.112.9e-23511
ENSCSAVP00000013332PROCNPF08083.113e-23511
ENSCSAVP00000013335PROCNPF08083.112.2e-23311
ENSCSAVP00000013331PROCNPF08083.118.1e-21112
ENSCSAVP00000013331PROCNPF08083.118.1e-21122
ENSCSAVP00000013336PROCNPF08083.112.7e-9011
ENSCSAVP00000013336PRP8_domainIVPF12134.82.3e-12711
ENSCSAVP00000013333PRP8_domainIVPF12134.83.4e-12711
ENSCSAVP00000013335PRP8_domainIVPF12134.83.6e-12711
ENSCSAVP00000013331PRP8_domainIVPF12134.83.6e-12711
ENSCSAVP00000013334PRP8_domainIVPF12134.83.7e-12711
ENSCSAVP00000013328PRP8_domainIVPF12134.83.8e-12711
ENSCSAVP00000013329PRP8_domainIVPF12134.83.8e-12711
ENSCSAVP00000013332PRP8_domainIVPF12134.83.9e-12711
ENSCSAVP00000013330PRP8_domainIVPF12134.84e-12711
ENSCSAVP00000013337PRP8_domainIVPF12134.81.2e-0711
ENSCSAVP00000013337PROCTPF08084.111.8e-5411
ENSCSAVP00000013336PROCTPF08084.111.4e-5311
ENSCSAVP00000013335PROCTPF08084.112.2e-5311
ENSCSAVP00000013331PROCTPF08084.112.2e-5311
ENSCSAVP00000013333PROCTPF08084.112.4e-5311
ENSCSAVP00000013332PROCTPF08084.112.5e-5311
ENSCSAVP00000013330PROCTPF08084.112.5e-4811
ENSCSAVP00000013334PROCTPF08084.113.6e-4711
ENSCSAVP00000013329PROCTPF08084.115.8e-3911
ENSCSAVP00000013328PROCTPF08084.115.9e-3911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000013484-7300-ENSCSAVP000000133332427 (aa)-H2Z6X1
ENSCSAVT00000013485-6969-ENSCSAVP000000133342322 (aa)-H2Z6X2
ENSCSAVT00000013486-6869-ENSCSAVP000000133352285 (aa)-H2Z6X3
ENSCSAVT00000013487-5062-ENSCSAVP000000133361674 (aa)-H2Z6X4
ENSCSAVT00000013480-7163-ENSCSAVP000000133292359 (aa)-H2Z6W7
ENSCSAVT00000013481-7296-ENSCSAVP000000133302431 (aa)-H2Z6W8
ENSCSAVT00000013482-7030-ENSCSAVP000000133312291 (aa)-H2Z6W9
ENSCSAVT00000013483-7447-ENSCSAVP000000133322474 (aa)-H2Z6X0
ENSCSAVT00000013488-1388-ENSCSAVP00000013337384 (aa)-H2Z6X5
ENSCSAVT00000013479-7178-ENSCSAVP000000133282360 (aa)-H2Z6W6
Gene Model
Click here to download ENSCSAVG00000007825's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007825's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000007825-10091.280ENSG00000174231PRPF899100.000Homo_sapiens
ENSCSAVG00000007825-10091.366ENSAPOG00000010079prpf89893.112Acanthochromis_polyacanthus
ENSCSAVG00000007825-10091.280ENSAMEG00000007940PRPF89992.874Ailuropoda_melanoleuca
ENSCSAVG00000007825-10090.625ENSACIG00000018280prpf89893.230Amphilophus_citrinellus
ENSCSAVG00000007825-10091.366ENSAOCG00000010725prpf89893.112Amphiprion_ocellaris
ENSCSAVG00000007825-10091.366ENSAPEG00000014397prpf89893.112Amphiprion_percula
ENSCSAVG00000007825-10090.808ENSATEG00000010062prpf89893.230Anabas_testudineus
ENSCSAVG00000007825-10089.844ENSAPLG00000010357PRPF810092.993Anas_platyrhynchos
ENSCSAVG00000007825-8390.429ENSACAG00000014784PRPF89893.009Anolis_carolinensis
ENSCSAVG00000007825-10091.280ENSANAG00000032629PRPF89992.874Aotus_nancymaae
ENSCSAVG00000007825-10091.323ENSACLG00000020858prpf89992.993Astatotilapia_calliptera
ENSCSAVG00000007825-10091.323ENSAMXG00000020291prpf89992.993Astyanax_mexicanus
ENSCSAVG00000007825-10091.280ENSBTAG00000011488PRPF89992.874Bos_taurus
ENSCSAVG00000007825-10084.728WBGene00004187prp-89885.952Caenorhabditis_elegans
ENSCSAVG00000007825-10091.280ENSCJAG00000001911PRPF89992.874Callithrix_jacchus
ENSCSAVG00000007825-10091.280ENSCAFG00000019221PRPF89992.874Canis_familiaris
ENSCSAVG00000007825-10089.844ENSCAFG00020009943PRPF810092.874Canis_lupus_dingo
ENSCSAVG00000007825-10091.280ENSCHIG00000017499PRPF89992.874Capra_hircus
ENSCSAVG00000007825-10091.280ENSTSYG00000014120PRPF89992.874Carlito_syrichta
ENSCSAVG00000007825-9889.138ENSCAPG00000009459PRPF89992.874Cavia_aperea
ENSCSAVG00000007825-10091.280ENSCPOG00000010379PRPF89992.874Cavia_porcellus
ENSCSAVG00000007825-10091.280ENSCCAG00000031983-9992.874Cebus_capucinus
ENSCSAVG00000007825-8480.495ENSCCAG00000037484-9980.495Cebus_capucinus
ENSCSAVG00000007825-10091.280ENSCATG00000038595PRPF89992.874Cercocebus_atys
ENSCSAVG00000007825-10091.280ENSCLAG00000004388PRPF89992.874Chinchilla_lanigera
ENSCSAVG00000007825-10091.280ENSCSAG00000013929PRPF89992.874Chlorocebus_sabaeus
ENSCSAVG00000007825-8594.000ENSCHOG00000008590PRPF88694.000Choloepus_hoffmanni
ENSCSAVG00000007825-10091.323ENSCPBG00000020409PRPF89992.993Chrysemys_picta_bellii
ENSCSAVG00000007825-10091.280ENSCANG00000043088PRPF89992.874Colobus_angolensis_palliatus
ENSCSAVG00000007825-8490.123ENSCGRG00001011538-10090.123Cricetulus_griseus_chok1gshd
ENSCSAVG00000007825-7594.027ENSCGRG00000005129Prpf810095.000Cricetulus_griseus_crigri
ENSCSAVG00000007825-10091.151ENSCSEG00000007905prpf89892.874Cynoglossus_semilaevis
ENSCSAVG00000007825-8490.741ENSCVAG00000010015-10090.741Cyprinodon_variegatus
ENSCSAVG00000007825-10091.366ENSDARG00000026180prpf89893.349Danio_rerio
ENSCSAVG00000007825-9293.355ENSDNOG00000018471PRPF89893.631Dasypus_novemcinctus
ENSCSAVG00000007825-8192.264ENSDORG00000006185Prpf89492.574Dipodomys_ordii
ENSCSAVG00000007825-10088.660FBgn0033688Prp89689.716Drosophila_melanogaster
ENSCSAVG00000007825-9394.073ENSETEG00000017592PRPF89694.073Echinops_telfairi
ENSCSAVG00000007825-10089.844ENSEBUG00000006548prpf89991.160Eptatretus_burgeri
ENSCSAVG00000007825-10091.280ENSEASG00005009514PRPF89992.874Equus_asinus_asinus
ENSCSAVG00000007825-9991.276ENSECAG00000021318PRPF810092.874Equus_caballus
ENSCSAVG00000007825-7997.345ENSEEUG00000012120-6596.296Erinaceus_europaeus
ENSCSAVG00000007825-9890.690ENSELUG00000007120prpf89892.874Esox_lucius
ENSCSAVG00000007825-10091.280ENSFCAG00000006297PRPF89992.874Felis_catus
ENSCSAVG00000007825-10091.366ENSFALG00000006628PRPF89992.993Ficedula_albicollis
ENSCSAVG00000007825-10091.280ENSFDAG00000004711PRPF89992.874Fukomys_damarensis
ENSCSAVG00000007825-10091.452ENSFHEG00000021084prpf89893.230Fundulus_heteroclitus
ENSCSAVG00000007825-10089.507ENSGMOG00000002028prpf89892.755Gadus_morhua
ENSCSAVG00000007825-10091.366ENSGALG00000002943PRPF89992.993Gallus_gallus
ENSCSAVG00000007825-10091.237ENSGAFG00000010337prpf89892.518Gambusia_affinis
ENSCSAVG00000007825-10091.151ENSGACG00000008504prpf89892.604Gasterosteus_aculeatus
ENSCSAVG00000007825-10091.323ENSGAGG00000008350PRPF89992.993Gopherus_agassizii
ENSCSAVG00000007825-10091.280ENSGGOG00000005516PRPF89992.874Gorilla_gorilla
ENSCSAVG00000007825-10091.366ENSHBUG00000016192prpf89992.993Haplochromis_burtoni
ENSCSAVG00000007825-10091.280ENSHGLG00000012029PRPF89992.874Heterocephalus_glaber_female
ENSCSAVG00000007825-10091.280ENSHGLG00100016494PRPF89992.874Heterocephalus_glaber_male
ENSCSAVG00000007825-10091.151ENSHCOG00000016414prpf89892.993Hippocampus_comes
ENSCSAVG00000007825-10091.237ENSIPUG00000023230prpf89892.874Ictalurus_punctatus
ENSCSAVG00000007825-10091.280ENSSTOG00000005128PRPF89992.874Ictidomys_tridecemlineatus
ENSCSAVG00000007825-10089.844ENSJJAG00000021159Prpf89892.874Jaculus_jaculus
ENSCSAVG00000007825-10091.323ENSKMAG00000016118prpf89892.993Kryptolebias_marmoratus
ENSCSAVG00000007825-10091.065ENSLBEG00000026903prpf89892.874Labrus_bergylta
ENSCSAVG00000007825-9393.133ENSLACG00000010479PRPF89993.350Latimeria_chalumnae
ENSCSAVG00000007825-10091.284ENSLOCG00000005409prpf89891.413Lepisosteus_oculatus
ENSCSAVG00000007825-10091.280ENSLAFG00000015445PRPF89992.874Loxodonta_africana
ENSCSAVG00000007825-10091.280ENSMFAG00000039995PRPF89992.874Macaca_fascicularis
ENSCSAVG00000007825-10091.280ENSMMUG00000004820PRPF89992.874Macaca_mulatta
ENSCSAVG00000007825-10091.280ENSMNEG00000035713PRPF89992.874Macaca_nemestrina
ENSCSAVG00000007825-10091.280ENSMLEG00000037937PRPF89992.874Mandrillus_leucophaeus
ENSCSAVG00000007825-10091.409ENSMAMG00000008919prpf89893.230Mastacembelus_armatus
ENSCSAVG00000007825-10091.323ENSMZEG00005015073prpf89892.993Maylandia_zebra
ENSCSAVG00000007825-10091.366ENSMGAG00000004769PRPF89992.993Meleagris_gallopavo
ENSCSAVG00000007825-8490.123ENSMAUG00000014365-10090.123Mesocricetus_auratus
ENSCSAVG00000007825-10091.280ENSMICG00000010320PRPF89992.874Microcebus_murinus
ENSCSAVG00000007825-10091.280ENSMOCG00000016838Prpf89992.874Microtus_ochrogaster
ENSCSAVG00000007825-10090.936ENSMMOG00000011887prpf89892.993Mola_mola
ENSCSAVG00000007825-10091.194ENSMODG00000010480PRPF89992.874Monodelphis_domestica
ENSCSAVG00000007825-9892.495ENSMALG00000003558prpf89893.325Monopterus_albus
ENSCSAVG00000007825-10091.237MGP_CAROLIEiJ_G0016740Prpf89992.874Mus_caroli
ENSCSAVG00000007825-10091.237ENSMUSG00000020850Prpf89992.874Mus_musculus
ENSCSAVG00000007825-10091.194MGP_PahariEiJ_G0017877Prpf89992.874Mus_pahari
ENSCSAVG00000007825-10091.237MGP_SPRETEiJ_G0017583Prpf89992.874Mus_spretus
ENSCSAVG00000007825-10091.280ENSMPUG00000013227PRPF89992.874Mustela_putorius_furo
ENSCSAVG00000007825-10091.120ENSMLUG00000002666PRPF89992.755Myotis_lucifugus
ENSCSAVG00000007825-10089.844ENSNGAG00000005305Prpf89892.874Nannospalax_galili
ENSCSAVG00000007825-10091.366ENSNBRG00000013127prpf89892.993Neolamprologus_brichardi
ENSCSAVG00000007825-9692.616ENSNLEG00000000897PRPF89692.491Nomascus_leucogenys
ENSCSAVG00000007825-10089.476ENSMEUG00000015999PRPF89990.166Notamacropus_eugenii
ENSCSAVG00000007825-10089.844ENSOPRG00000003102PRPF89892.578Ochotona_princeps
ENSCSAVG00000007825-10091.280ENSODEG00000008468PRPF89992.874Octodon_degus
ENSCSAVG00000007825-10091.409ENSONIG00000008153prpf89893.112Oreochromis_niloticus
ENSCSAVG00000007825-9691.622ENSOANG00000004250PRPF89796.447Ornithorhynchus_anatinus
ENSCSAVG00000007825-10091.280ENSOCUG00000000081PRPF89992.874Oryctolagus_cuniculus
ENSCSAVG00000007825-10091.194ENSORLG00000008036prpf89892.755Oryzias_latipes
ENSCSAVG00000007825-10091.155ENSORLG00020021070prpf89892.755Oryzias_latipes_hni
ENSCSAVG00000007825-10091.194ENSORLG00015002340prpf89892.755Oryzias_latipes_hsok
ENSCSAVG00000007825-10089.217ENSOMEG00000016866prpf89892.874Oryzias_melastigma
ENSCSAVG00000007825-10091.163ENSOARG00000013312PRPF89992.544Ovis_aries
ENSCSAVG00000007825-10091.280ENSPPAG00000042753PRPF89992.874Pan_paniscus
ENSCSAVG00000007825-10091.280ENSPPRG00000008746PRPF89992.874Panthera_pardus
ENSCSAVG00000007825-10091.194ENSPTIG00000019200PRPF89892.637Panthera_tigris_altaica
ENSCSAVG00000007825-10091.280ENSPTRG00000039576PRPF89992.874Pan_troglodytes
ENSCSAVG00000007825-10091.237ENSPANG00000024607PRPF89892.874Papio_anubis
ENSCSAVG00000007825-10091.366ENSPKIG00000011201prpf89893.112Paramormyrops_kingsleyae
ENSCSAVG00000007825-10091.280ENSPSIG00000013393PRPF89992.874Pelodiscus_sinensis
ENSCSAVG00000007825-8490.741ENSPMGG00000021110-10090.741Periophthalmus_magnuspinnatus
ENSCSAVG00000007825-10091.280ENSPEMG00000021699Prpf89992.874Peromyscus_maniculatus_bairdii
ENSCSAVG00000007825-10090.885ENSPMAG00000005438prpf810090.939Petromyzon_marinus
ENSCSAVG00000007825-10091.194ENSPCIG00000022603PRPF810092.874Phascolarctos_cinereus
ENSCSAVG00000007825-10091.366ENSPFOG00000007005prpf89892.637Poecilia_formosa
ENSCSAVG00000007825-10090.929ENSPLAG00000020777prpf89991.492Poecilia_latipinna
ENSCSAVG00000007825-10091.366ENSPMEG00000004051prpf89892.637Poecilia_mexicana
ENSCSAVG00000007825-10091.280ENSPREG00000021902prpf89992.755Poecilia_reticulata
ENSCSAVG00000007825-10091.280ENSPPYG00000007777PRPF89992.874Pongo_abelii
ENSCSAVG00000007825-10089.844ENSPCAG00000008938PRPF88893.542Procavia_capensis
ENSCSAVG00000007825-10091.280ENSPCOG00000015182PRPF89992.874Propithecus_coquereli
ENSCSAVG00000007825-9493.319ENSPVAG00000002134PRPF89193.802Pteropus_vampyrus
ENSCSAVG00000007825-10091.366ENSPNYG00000016356prpf89992.993Pundamilia_nyererei
ENSCSAVG00000007825-10091.409ENSPNAG00000009247prpf89892.993Pygocentrus_nattereri
ENSCSAVG00000007825-10091.237ENSRNOG00000003495Prpf89992.874Rattus_norvegicus
ENSCSAVG00000007825-10091.280ENSRBIG00000031219PRPF810092.874Rhinopithecus_bieti
ENSCSAVG00000007825-10091.280ENSRROG00000038014PRPF810092.874Rhinopithecus_roxellana
ENSCSAVG00000007825-10060.757YHR165CPRP89660.457Saccharomyces_cerevisiae
ENSCSAVG00000007825-10091.280ENSSBOG00000029717PRPF89992.874Saimiri_boliviensis_boliviensis
ENSCSAVG00000007825-10091.151ENSSHAG00000006167PRPF89992.874Sarcophilus_harrisii
ENSCSAVG00000007825-10091.366ENSSFOG00015013905prpf89892.993Scleropages_formosus
ENSCSAVG00000007825-10091.065ENSSMAG00000017736prpf89892.857Scophthalmus_maximus
ENSCSAVG00000007825-10091.366ENSSDUG00000003029prpf89893.112Seriola_dumerili
ENSCSAVG00000007825-10090.365ENSSLDG00000017096prpf810094.678Seriola_lalandi_dorsalis
ENSCSAVG00000007825-8492.901ENSSARG00000002892PRPF88692.901Sorex_araneus
ENSCSAVG00000007825-10091.108ENSSPUG00000007463PRPF89992.755Sphenodon_punctatus
ENSCSAVG00000007825-10090.765ENSSPAG00000015639prpf89892.323Stegastes_partitus
ENSCSAVG00000007825-10091.280ENSSSCG00000017817PRPF89992.874Sus_scrofa
ENSCSAVG00000007825-10091.366ENSTGUG00000005648-9992.993Taeniopygia_guttata
ENSCSAVG00000007825-5391.952ENSTGUG00000015597-9593.897Taeniopygia_guttata
ENSCSAVG00000007825-10091.151ENSTRUG00000015906prpf89892.832Takifugu_rubripes
ENSCSAVG00000007825-10090.365ENSTNIG00000003460prpf89794.430Tetraodon_nigroviridis
ENSCSAVG00000007825-9193.699ENSTBEG00000006431PRPF88993.902Tupaia_belangeri
ENSCSAVG00000007825-10090.722ENSTTRG00000006869PRPF89992.637Tursiops_truncatus
ENSCSAVG00000007825-10089.844ENSUAMG00000028213-10093.684Ursus_americanus
ENSCSAVG00000007825-5292.874ENSUAMG00000015644-9392.544Ursus_americanus
ENSCSAVG00000007825-10091.382ENSUMAG00000009385PRPF89892.162Ursus_maritimus
ENSCSAVG00000007825-10089.583ENSVPAG00000006063-6797.241Vicugna_pacos
ENSCSAVG00000007825-10091.280ENSVVUG00000021695PRPF89792.874Vulpes_vulpes
ENSCSAVG00000007825-10091.112ENSXETG00000022259prpf89992.874Xenopus_tropicalis
ENSCSAVG00000007825-10091.280ENSXCOG00000012775prpf89892.832Xiphophorus_couchianus
ENSCSAVG00000007825-10091.237ENSXMAG00000008505prpf89892.781Xiphophorus_maculatus

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